Vidua chalybeata (village indigobird): 128789239
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Entry
128789239 CDS
T11587
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04136
Autophagy - other
vcha04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128789239 (ATG2B)
04136 Autophagy - other
128789239 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128789239 (ATG2B)
03029 Mitochondrial biogenesis [BR:
vcha03029
]
128789239 (ATG2B)
Membrane trafficking [BR:
vcha04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
128789239 (ATG2B)
Mitochondrial biogenesis [BR:
vcha03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128789239 (ATG2B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
128789239
NCBI-ProteinID:
XP_053800946
LinkDB
All DBs
Position
6:14080501..14125987
Genome browser
AA seq
2078 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLTQVPLDKWCLNEIL
ESADAPLEVTDGFIQSISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLASGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFLDTVLRIEHVPE
NSKSGTALEIRVERTMYCDETADECSGINVHQPTAFAHKLLQLSGVSFFWDEFPASAKSS
PVCSATQLATEPKLSPSWNPKIIYEPHPQLTRNLPEITPSDPVQICKLIGRMELSLTLKQ
NEVLPGAKLDIDGQIDSVHLFLSPRQVHLLLDMVAAIAGPGNLSRIELSNKDRKNRPMQQ
EDEYRIQMELKRYLRKESLSAGASSEQSFYETESARTPSSREEEVFFSMAEMDMSHSLSS
LPPLGDPPTMDLDLSLTSTYTTTPAGSPLSTTVLQPTWGDFLDRNKQELQPPRGSSLTAN
MVHQTSIRRTSIPSRSVSVDESRPELLFRLAVGTFSVSVLHIDPLPPPESSLNLNPLTPM
ARDFFARIEKIEPVKFSTEDFLSFREVFAEACSHDHLRFIGTGIKVSYEQRQRTASRSFS
TDLSIGEMEFLECLFSTDSHSMQPHYTELLTFHSEERNDSHSMPCLQLHYKHLDNRGPQG
SQGRLSSVPQKADLQIKLSPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYASYNKHL
SLHKAFAEVFLDDSHTPANCRVSVQVTAPALKLSVRFPIPDLRSDQERGPWFKKSLQKEI
LHLEFTDTEFKTEFIGGSTPEQVKLELTFKELTGSFEEDNAETPVKFFQVSGGTDGDITS
SSDNFDWPRIVLKVNPLAVHSILERIAAEEEEGDNNFQEEEEGGSHSLKDVCDIRRPEPS
PFSSRRVMFENEEMVMPGDVVEMTEFQEKTINNSHYVLELMLPNIHLTLPNKSFYEKLYN
RISNDLLLWEPTAPSPVETFENLSYGVGLSVASQLINTFSKDSFSQFKSAVHYDDESGSE
EETLQYYSTVDPNYRSRRRKKLDSQNKNSQSFLSVLLNVTHGLVSIFTDVKQDDGSTLEG
KYGEFWFEFNGGSLFSVTKYEGFEDRHYVCLHSSSLNLYHQGFVDGVVPSSEVRLPSTIR
PHWLEPTICFSEEDGLSKTTSDGVGVDSPSMLTVAVKIQSDKIESNTKEFLVAVGLRGAT
LQHRVLPSGLSWHEQILYFLNISDEPVLGYSPPATITTFHVHLWSCALDYRPLFLPVRSL
LTVETFSISSSVAVDKSSSTLRIILDEAALHLSDKCNTVMVNLHRDYVRVMDMGLLELTI
TAVKSDSEGERTKPRFELHCSSDVIHIRTCSDSCAALMNLIQYIASYGDLHPPAKTEVKR
GVSKPKMKVETFSQPSSHGPGLAESEQQILRDLMSDAMEEIETQQTASAIKQESNGVLDD
RSQTQEPSCSDLFLFPDESGNVSQEPSPTYASFTHHLISEAMGDVPAESDDFCILFAPKV
AVAEKEEEPVIKIMVDDAIIIKENHFSQPIKKTDTSKAPLHFPVPLVRYVVKEISLIWHL
YGGRDFGTAPPTSPAKSFISPHSSPSHTPTRHGRNTACGGRGRNPDFLMEIQLSKVKFQH
EVYPPGGAEGESCLLEQPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNM
LTVKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVELLVTPDPE
VKKSPGAEVTCSLPRHVSSLKEPSPVISFASHKQANENGSIDSMDVVNGDDDHFSQETTS
YSDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLCYRHG
LLGVDKLFSYAISEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR
IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPTFIEAKKIKRFPRH
RLAPQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPTVV
KPFIVATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggcctttctcggagtccatcaagaagagagcctgcaggtacctgctgcagcgg
tacctgggccacttcttgcaggagaagctcagcctggaacagctcagcctggatctctac
cagggcaccggctccttgacgcaagtccctctggataagtggtgtcttaatgagatcctg
gagtctgctgatgcacctctggaagtcacagatggatttatccaatcaatttctttatct
gtcccgtgggggtcgttactgcaggataactgtgcattagaagtaaaaggattagagatg
gtcttcaggccaagaccaaggcttgcatctggttctgaacctatgtattggtcaagtttt
atgaccagtagtatgcagcttgcaaaagagtgtcttagccaaaaattgacagatgaacaa
ggagaagggtcccagccttttgaaggacttgagaaatttgcagaaactattgaaacagtt
ctaagaagagtgaaagttacctttttggatactgtgttgcgaatagaacatgtgccggaa
aactctaaaagtggaactgcacttgaaatcagagttgaacgaactatgtactgtgatgaa
actgcagatgagtgctctggaattaatgtacatcagcccacagcttttgctcacaaatta
ctgcagctctcaggtgtctctttcttctgggatgagtttcctgcatcagcaaagtcctcc
ccagtgtgttcagctacacagctggcaactgaaccaaagctttcacctagctggaatcca
aaaatcatttatgagccacatccacaattaacaagaaacttgccagaaattactccttct
gaccctgtacagatctgtaagctgattggtagaatggagttaagcctaacattaaaacaa
aatgaagtacttcctggagctaagttggatatagatggacagatagattctgtacatctg
tttctgtcaccaaggcaggttcatcttctgttggacatggtagcagctattgctggacca
ggcaatctgagcaggatagaattgtcaaataaagataggaagaatcggccaatgcaacag
gaggacgagtatcggattcagatggagttgaaacgttatttaaggaaggagtctttatct
gcaggagcatcctctgagcaaagcttctatgagacagagagtgccagaacgccttctagt
cgtgaggaagaagttttcttctcaatggctgaaatggacatgtcccacagcctttcctcc
cttccacctcttggagatcctccaaccatggatctagacttgtctttaaccagtacatac
acaactacaccagcaggatctccactgagcactacagtgctgcaaccaacttggggtgat
tttcttgatcgtaacaaacaagaattacagcctccaagaggttcctcgctaacagccaat
atggttcaccagacttccataagaaggacatctattccatccagatctgtttctgtggat
gaatccagacctgagctactttttagactggcagttggaactttctcagtgtctgtactt
catattgaccctttacccccacctgaaagttcactgaaccttaacccattgacaccaatg
gctcgggatttctttgcccgaatagaaaagattgagccagttaagttttcaacagaagat
tttctgtccttccgagaagtatttgcagaagcttgttctcatgatcaccttaggtttata
ggtactggcatcaaagtgtcttacgagcaaagacaaaggactgcctcgcgaagttttagt
actgacttatccattggtgagatggagttcctggaatgccttttttctactgactctcat
tccatgcagcctcactatacagagctgctgacatttcattctgaagaaagaaatgattct
cattctatgccatgccttcagctgcattataagcatttagataatagaggacctcagggt
agtcaagggagactcagttctgttccacagaaagcagatttacaaataaagttaagtcca
gtgttttgtgagctggatattagtattgtagacagattaaattccttacttcaaccgcag
aaactaactacagtggagatgatggcatctcacatgtatgcttcttacaataaacactta
agtctgcataaagcatttgctgaagtttttctggatgattcacatactcctgcaaactgt
agagtttcagttcaagtcactgcccctgcattaaaactctctgttcgtttcccaatacct
gatctacggtcagatcaggaaagaggaccatggtttaagaaatcacttcagaaggagatt
cttcatcttgaatttacagatacggaatttaaaactgaatttataggagggtcgactcca
gagcaagttaaattagagcttacctttaaagagctaactggttcatttgaagaagataat
gcagaaacaccagtaaaattttttcaggtatcaggtggcacagatggagatataacatca
tcatcagacaattttgactggcctcggattgtattgaaagtaaaccctctggctgtgcac
tctattctggaaaggatagcagctgaggaggaagaaggtgataataactttcaagaggaa
gaagaaggagggtctcattctttgaaggatgtctgtgatattagaagaccagagccttct
ccattttcttctcgtagggtcatgtttgaaaatgaagagatggtgatgccaggagatgta
gttgaaatgactgagtttcaggaaaaaacaattaacaattctcattatgtactggaactc
atgttaccaaacattcacttaacactaccaaacaaaagcttttatgaaaaactttacaac
aggatcagcaatgatttattgttgtgggaacccacagctccatctcctgtagaaactttt
gaaaacctttcttatggtgttggactatctgtggccagccagctcatcaacactttcagt
aaagacagctttagtcaatttaaatctgcagttcattatgatgatgaaagtggatctgag
gaagaaacactacagtattattccactgttgatccaaactatcgttcacgcagaaggaaa
aagcttgactcgcagaataagaactcacaaagctttctgtctgttctgctaaatgtgaca
catggattagtgtcaatattcacagatgtaaagcaggatgatggaagtacactggaagga
aaatatggtgaattttggtttgagttcaatggtggttcccttttcagtgtgactaaatat
gaaggctttgaggacagacactatgtttgtctccattctagcagcctcaatttatatcat
caaggttttgtagatggagttgtcccttcctctgaagtgcgactgcccagcacaatacgt
ccccattggttagagcctactatttgtttttctgaagaggatggtcttagtaagactact
tcagatggtgtaggagtggatagtccaagtatgctgactgttgcagtcaaaatccagtca
gataaaatagagagcaatacaaaggaatttctggttgctgttggactacgaggagccacc
cttcagcatcgtgtgctgccttcaggtttaagctggcatgagcagattttatattttttg
aatatttctgatgagcctgttctgggatatagtcctccagctacaattacaacttttcat
gtacacctgtggagttgtgctcttgattacaggcccttgtttttgccagtcagatctcta
cttactgttgaaacgttcagcatttccagcagtgttgcagtagataaatcctcttctact
ctcaggataattttagatgaagctgctttgcatttgtctgacaaatgcaacactgtcatg
gtgaacctccatagagattatgttcgtgttatggatatgggactgctggagctaaccatt
acagcagtaaaatctgattctgagggagaaagaactaaaccacgttttgagctgcactgt
tccagtgatgtaatccatattcgtacctgctctgattcgtgtgctgcactaatgaatctc
atacaatatattgcaagttatggtgatttacatccacctgctaagacagaggttaaacgt
ggagttagcaagccaaaaatgaaggtagagacctttagccaaccatcttcccacggacca
ggccttgctgaatcagagcagcagattttacgggatttgatgagtgatgccatggaagaa
attgagactcagcagactgcttctgccatcaagcaagagtctaatggagttttagatgac
agatctcaaactcaggaaccatcttgctcagatctcttcctgtttccagatgaaagtgga
aatgtctcacaagagccaagtcccacttacgcttcatttactcatcacctgataagtgag
gccatgggagatgttccagcagaaagtgatgatttctgcattctttttgctcctaaagtt
gctgttgctgaaaaagaggaagagccagttataaaaataatggttgatgatgcaattatc
ataaaggaaaatcatttcagtcaacctataaaaaaaacagatacaagcaaagctccactt
cattttcctgttcctctggtacgctatgttgtaaaggaaatatctcttatttggcatctt
tatggtggaagggattttgggactgcaccaccaacctctccagctaaaagtttcataagt
cctcatagttctccttctcatacaccaacaaggcatggacggaatacagcatgtggagga
agaggaagaaacccagacttcctaatggaaatacaattaagcaaggtgaaattccagcat
gaggtgtatcctccaggtggtgcagaaggtgaatcctgtctgttggagcagccagtgtca
cgacaagtttttattgttcaagacctggagatcagagatcgcttggctacatcacaaatg
aataaatttctctatctctactgcagtaaggagatgcccagaaaagcacattcaaacatg
ttaacagttaaagctttacatgtccgtccagagtctggcagatccccacaagaatgttgt
ttacgtgtttcactaatgccacttcgcctcaatattgaccaggatgccttgtttttcctg
aaggactttttcactagcctttctacagaagtagaactcctagttactccagatcctgaa
gttaaaaagtctcctggtgctgaagttacatgtagtttgcccaggcatgtcagcagcctt
aaggaaccaagtccagtcatttcttttgcatcacacaaacaagcaaatgaaaatggcagc
attgattccatggatgtggttaatggagatgatgatcatttctcacaagaaacgacatca
tacagtgatcagccagtatttttcagagaatttcgctttacatcagaagttccaatacgg
cttgattaccatggcaagcatgtctcaatggatcagggaacattagctgggattcttatt
gggcttgctcagttgaactgctcagaattaaagctgaagaggctttgttatagacacggt
ttattaggtgtggataaattgttctcctatgccatcagtgaatggcttaatgatataaag
aaaaaccagctaccaggaattttgggaggagtagggcctatgcattcacttgtgcagtta
gtgcaaggtctgaaagacctggtgtggttgccaatagagcagtaccgcaaggacggtcgt
attgtcagaggctttcaaagaggagcagcttcttttggtacttccactgcaatggcagct
ctggagctaacaaacagaatggttcagactatacaggcagctgcagaaactgcttatgac
atggtatcaccagggcctaccttcattgaagcaaaaaagatcaaacggttccctcgccat
cgcctggctcctcagccggttgacctgcgggagggtgtagccaaggcatacagtgttgtg
aaagaggggattacagacacagcccaaaccatctatgagactgctgctcgtgagcatgag
aacagaggagtcactggagcagtgggaggagtcctccgccaaatcccaccaactgtggtg
aaacctttcattgttgcaacagaggcgacctcaaatgttctgggtggaatgagaaaccag
atcaggccagatgtgcgtcaagaagaatctcagaagtggcgccttggggaggattga
DBGET
integrated database retrieval system
