Vidua chalybeata (village indigobird): 128789785
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Entry
128789785 CDS
T11587
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128789785 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128789785 (CSTF3)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
128789785 (CSTF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
128789785
NCBI-ProteinID:
XP_053801955
LinkDB
All DBs
Position
6:60532894..60580861
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AA seq
718 aa
AA seq
DB search
MSGEGTAGDQTAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKLPDTVDEAVRII
TGSLPEIAVEGNGPVENNTILNKAVKRSHEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagagggaaccgccggcgaccagactgctgaatatgtcccagaaaaagtgaag
aaagctgaaaagaaactagaagaaaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcagcctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtggagaagttatttcagcgctgccttatgaaggttttacacattgat
ttatggaaatgttacctttcctatgtacgagaaaccaaggggaagctacctagttacaaa
gaaaaaatggctcaggcatatgattttgctctggataagattggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaaaggcgtagaagcagtaggatcttat
gcagaaaaccagaggatcacagctgtccgtagggtttaccagcgtggttgtgtcaacccc
atgataaacatagagcagctctggagagattataacaaatatgaagagggcatcaatatt
cacttagccaagaagatgatcgaggacaggagtagagattatatgaatgcacgacgcgtg
gcaaaggagtacgagacggtgatgaagggcctggaccgcaacgctccctccgtgccccca
caaaacaccccccaggaggctcagcaggtggacatgtggaagaagtacatccagtgggaa
aagagcaaccctctacgaacagaagaccagactctcattacaaaaagagtgatgtttgcc
tatgagcagtgtctcctggtgctgggccatcacccagacatctggtatgaagcagctcag
tacctcgagcagtccagcaagctgctggctgagaaaggggacatgaacaatgctaaactt
ttcagtgatgaggctgctaatatttatgaaagagcgatcagcactttattaaagaagaat
atgcttctttattttgcatatgcagattacgaagagagccggatgaagtacgagaaagtg
cacagcatctacaaccggctcctggctatcgaggacatcgaccccacgctggtttatatc
cagtacatgaaatttgcaaggcgagcagaaggcattaaatccggaaggacgatatttaag
aaagcgagagaggatgcccggacccgccaccatgtctatgttactgcagctttaatggag
tattattgtagtaaggataagtctgtggcctttaagatttttgagctagggctgaaaaaa
tatggggacattccagaatatgtactggcatatatcgactacctttcccaccttaatgag
gacaacaatacaagagttttgtttgaacgtgttttaacttcagggagccttccacctgag
aaatctggggaaatctgggctcggtttttagcctttgaaagtaacattggggatctggcc
agcatcctgaaagtggaaaaacggaggtttacagccttcaaggaagaatatgagggcaaa
gaaacagctctgctggtggacaggtacaagttcatggatctgtacccctgctctgccagc
gagctgaaggcccttggttataaggatgtctcccgtgccaagctagcagcaataattcca
gaccctgtggttgcaccttccatcgtgcctgtcctcaaggatgaagtagacaggaaacct
gaatatcccaaaccagacacccagcagatgattccatttcagccaagacacttagcacct
ccaggtttacatcctgtcccgggcggggtatttcctgttccaccagcagctgtagttctc
atgaagctcctgccacctcctatttgttttcagggtccctttgttcaagtggatgagctc
atggagatattcagaagatgcaaactgccagacactgttgatgaagccgtacggataatc
acgggcagcctgcctgaaatagctgtggaaggcaatggacctgtggaaaacaacaccatt
ctcaacaaggctgtgaagagatcacatgaggattctgatgacgatgaggagaaaggatct
gtagttccccctgtacatgacatttacagagcacgacagcaaaagagaatccggtga
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