Vidua chalybeata (village indigobird): 128789929
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Entry
128789929 CDS
T11587
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04136
Autophagy - other
vcha04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128789929 (ATG13)
04136 Autophagy - other
128789929 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128789929 (ATG13)
03029 Mitochondrial biogenesis [BR:
vcha03029
]
128789929 (ATG13)
Membrane trafficking [BR:
vcha04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128789929 (ATG13)
Atg1 complex
128789929 (ATG13)
Mitochondrial biogenesis [BR:
vcha03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128789929 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
128789929
NCBI-ProteinID:
XP_053802227
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All DBs
Position
6:38944872..38968913
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AA seq
540 aa
AA seq
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MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGAV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQPAALG
VGSADMGYPVLFAGGLNAAHPHQLIGPGKEGGVPPVPSQPAHGTQADQERMCTPLDGVHY
SAVTPSSSEDTETVSNSSEGKCGSPQDLLETIFIRKVGAFVNKPINQVTMANLDIPFAMF
APKNVELEDNDPMVNPPESPETESPLQGSLHSEGSSGSSTGNTHDDFVMIDFKPAFSKDD
ILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKEFDAFVETLQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacagtacaagtaattgtccaggcccgacttggagagaaaatctgtacccgc
tcatcatcctccccaacaggttctgactggttcaatttagcaatcaaagatataccagag
gttactcatgaagcaaagaaagccctggcaggacagctgcctgctgttggacggtctatg
tgcgtggagatttccctcaaaacctcagagggggactccatggagctggaaatttggtgt
ctagaaatgaatgagaagtgtgacaaagaaatcaaagtttcatacactgtatacaacagg
ctgtctctactgctgaagtctttgcttgctataaccagagtaactccagcctacagactc
tctaggaaacaaggccatgaatatgtaatattgtacaggatatattttggtgaagtccag
ctgagtggcttgggagaaggtttccagacagtccgtgttgggacagtgggtaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattataattgatcactttgtggaccgtccctat
cccagctcttcacccatgcatccctgcaattacagagctggtgaggacaatggtgcagta
tacccctcagtagaagattcccaagaagtgtgtaccacatctttttccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcctgtggtgacg
gacaccttgaaggtcccagtgatggggctggccttttcccatcaacctgctgccctggga
gttggatcagctgacatggggtatcctgtcctctttgctggtggcttgaatgctgcacac
cctcaccagttgattggtccaggcaaagaagggggagttcccccagttcctagccagcct
gcacatggcactcaagctgaccaagagaggatgtgcaccccactggatggagtccattac
tcagcagttactccttctagcagtgaggacacagaaacagtatccaacagcagtgaagga
aagtgtggctccccacaagaccttttagagaccatctttatccggaaggtgggagctttt
gtcaacaaacccattaaccaggtgaccatggccaacttagacattccttttgccatgttt
gctcccaagaatgttgagctggaagataacgaccccatggtcaatcctcctgaatcccca
gaaacggaatctcctctacaaggcagcttacactcagaaggctccagtggcagcagcaca
gggaacacccatgatgactttgttatgatcgactttaaaccagcattttcaaaagatgac
attcttccaatggatctggggacattttaccgtgaatttcagaacccccctcaactcagc
agcctctccattgacattggagcacagtccatggcagaggatttggactcgttaccagag
aagctggcagtccatgagaaaaacgtcaaagaatttgatgcttttgtggaaaccttgcag
tga
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