Vidua chalybeata (village indigobird): 128790205
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Entry
128790205 CDS
T11587
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04519
Cadherin signaling
vcha04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128790205 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128790205 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vcha04990
]
128790205 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
vcha04990
]
PDZ domain-containing proteins
MAGUK family proteins
128790205 (PALS1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128790205
NCBI-ProteinID:
XP_053802737
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All DBs
Position
6:32863514..32896342
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AA seq
675 aa
AA seq
DB search
MTTSHMNGHITEDSDNETKNVDLVSPEEPQKHREMAVDCPGDLGSRMMPMRRSAQLERIR
QQQEDIRRRREEEGRKQELDLTASMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYTVK
TLEVEELLNSLKHIQHILVDPQSQEDISLILQLVQNSDFQNAFKIHNAVTVHMSKASPPY
PLSSNAQELAQEVQSVLKPSHHKDGQELNALLNAPHMQALLLAHDKVAEQEMQPEPMTDE
KIYENVGMYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFAAAVPHTTRSRRETEAAGRDYHFISRQAFESDI
AAGKFIEYGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFVAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcatatgaatggacatatcacagaagactctgacaatgaaacaaaaaac
gtggatcttgtgtctcctgaggaacctcagaagcacagggaaatggctgttgattgccct
ggggacttgggctccaggatgatgcccatgcggcgcagcgctcaactggagcgaatccgt
cagcaacaggaggacataaggcgcagacgagaagaagaaggaaggaaacaagaactggac
cttactgcttccatgaggctgaagaaactagcacaaattcctcctaaaactggaatagat
aatccaatatttgacacagaagaagggattgttttggagagtcctcattacactgtgaaa
acactagaagtggaagaactgttaaattctcttaagcatatccagcacattttggtagac
cctcagagtcaagaggatatctcactcattctacagcttgttcaaaatagcgattttcag
aatgcatttaagatccacaacgctgttacagtccacatgagcaaagccagccctccatat
cctctcagctccaatgcacaagaactagcacaagaggtacagagtgttttgaaacccagc
caccataaggatggacaggagcttaatgctttgctgaatgcccctcacatgcaggcactt
ctactggctcatgataaagttgcagaacaagaaatgcaaccagagcctatgacagatgaa
aagatttatgagaatgttggcatgtatggaggggagacggttaaaatagttcgcattgag
aaagctcgggatattcccttgggtgctactgttcgcaatgaaatggattctgttatcatc
agtcgaatagtcaaaggaggtgctgcagagaagagtgggctgttgcatgaaggggatgaa
gttctggagatcaatggcattgagatccgtggaaaagatgttaatgaagtttttgacttg
ctggctgacatgcatggtactctgaccttcgtattgattcctagtcagcagagcaagcca
cctcctgcgaaggagacagttatacacgtgaaagcgcattttgactatgatccctctgat
gacccttacgtcccctgccgagagttaggcctgtcttttcaaaaaggagacatactccat
gtgatcagtcaagaagatccaaactggtggcaggcctacagagatggagatgaagataat
cagccattggcaggcctcatccctggaaaaagttttcagcaacaaagagaagcaatgaag
caaaccatagaagaagacaaggagcctgaaaaatcaggaaaactctggtgtgcgaagaag
aacaaaaagaaacggaaaaaggttttatacaatgcaaataaaaatgatgattatgacaat
gaggaaattctgacctacgaggaaatgtcactgtaccatcagccagcaaataggaaacgt
cccatcgttctgattggcccccagaactgcggccagaacgagctgcggcagagactgatg
aataacgaagtggatcgctttgccgccgccgtgccccatactactcggagtaggcgagag
actgaagccgctggcagggattatcatttcatctcccgacaggcatttgagagtgacata
gctgcaggcaagttcattgaatatggggagtttgagaagaacctgtatggtacgagcata
gactccgtgcggcaagtcatcaactcgggcaagatatgtcttttaaatcttcatacccag
tcactgaaaacactccgtaactctgacttgaagccatatatcatatttgttgcaccacct
tcacaagaacgactacgtgctttattggccaaagaagggaaaaatccgaagccagaagag
ctgagagaaatcatagagaagacaagggagatggaacagaacaatggccactactttgat
acagcaattgtgaattctgatcttgataaggcgtatcaagagttacttcggttaataaat
aagctcgacacagaaccccagtgggtgccctccacctggctacgatga
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