KEGG   Vidua chalybeata (village indigobird): 128790639
Entry
128790639         CDS       T11587                                 
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
vcha  Vidua chalybeata (village indigobird)
Pathway
vcha04382  Cornified envelope formation
vcha04510  Focal adhesion
vcha04512  ECM-receptor interaction
vcha04514  Cell adhesion molecule (CAM) interaction
vcha04518  Integrin signaling
vcha04810  Regulation of actin cytoskeleton
vcha04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:vcha00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128790639 (ITGA6)
   04514 Cell adhesion molecule (CAM) interaction
    128790639 (ITGA6)
   04518 Integrin signaling
    128790639 (ITGA6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128790639 (ITGA6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128790639 (ITGA6)
   04810 Regulation of actin cytoskeleton
    128790639 (ITGA6)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    128790639 (ITGA6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcha04147]
    128790639 (ITGA6)
   04515 Cell adhesion molecules [BR:vcha04515]
    128790639 (ITGA6)
   04090 CD molecules [BR:vcha04090]
    128790639 (ITGA6)
Exosome [BR:vcha04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128790639 (ITGA6)
  Exosomal proteins of breast milk
   128790639 (ITGA6)
Cell adhesion molecules [BR:vcha04515]
 Integrins
  Integrin alpha subunits
   128790639 (ITGA6)
CD molecules [BR:vcha04090]
 Proteins
  128790639 (ITGA6)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 DUF4381
Other DBs
NCBI-GeneID: 128790639
NCBI-ProteinID: XP_053803534
LinkDB
Position
7:complement(18666515..18794402)
AA seq 1156 aa
MRSPPAPAPRGLAACGTGAAPGMGTSGRGVTGDRDLPHRTAQAAAPLVGRGSPIRTSEGS
GPRLSPAASAVLCLWCVPPSGRQPQGKIRASVPSFQNFKMPEDFTNTLNEGKIILWIEDL
CQRLLVGAPREKAFPAQQANRTGGLYSCDIASPNTNCLRVKFDEETDPKMESKEDQWMGV
TVQSQGPGGNVVTCAHRYEKRQYVNTVQETRDIIGRCYVLSQDLTIKDDMDNGVWSFCDG
RLRGHEKFGSCQQGVAATFTRDYHYIVFGAPGTYNWKGVVRAEQKNQTFYDLGIFDDGPY
EVGDESRQDKNLVPVPANSYLGFSLDSGKGIVSQDEMTFVSGAPRANHSGAVVLLKKEKN
QRALSLEHMFEGEGLASSFGYDVAVVDLNSDGWQDIVVGAPQYFDRSGDIGGAVYIYMNH
QGKWAGVKPLRLNGTADSMFGLAVENVGDINQDGYPDIAVGAPYDGFGKVYIYHGSENGI
NTKPAQILDGEKTNTNFFGYSIAGNMDLDKNSYPDVAVGSLSDSVNVYRSRPVISIRRNI
TVQPDRIDLKKKNPEDHGEIRMDVKACFKYTANPRNLNPRIKINYTFEVENERRQLGLPS
RVRFSDHSSDQFTASTTLRGQNSWECVTTKLILQEKIKDKLRPIPISVSVKIAGLESPSK
RKESALPDLIPILNSNESETDTTKVEFLKEGCGEDNECHSNLKLQYRFCTREGNEDRFTY
LPLENGMPVLVLKDQKDIALEITVTNNPSDTKNPQKDGEDAYEAKLIATFPDSLTYSAFR
EMRGYPEKQLTCGANQNGSQAECELGNPFKRNSNVTFYLILSTTKVNVDTTDLDINLKLE
TTSTQVNLTPIIASAKVVLELLLSLTGVAKPSQVYFGGNIIGESAVKSEDDIGNLIEYEF
RVTNLGRPLKTFGTASLDIQWPKEISNGKWLLYLMKIDSKGLEKVYCQPENEINSLRVAE
SHNSRRKREVAEKQITDSQAFSLFSERKYKTLSCNANARCVDIKCPLKGLDSKASIVLRS
RLWNSTFLEEYSKMNYLDILVRASISVPAAAKNVKLTNEVAQVRVTVFPAKPVALYTGVP
WWIIAVAILAGILMLALLVFLLWKCGFFRRSRYEDSVPRYHAVRIRKEERQIKDGKNQDL
EIKQWFTKWNENESYS
NT seq 3471 nt   +upstreamnt  +downstreamnt
atgcggagcccgcccgcgccggctccccgcgggctcgcggcgtgcgggacgggagcggcg
ccgggcatggggacgagcggccgcggggtcaccggggaccgggaccttccccatcgtacg
gctcaggctgctgcacctttggttggacggggcagtccgatccgcaccagcgagggctcg
gggccgcggctcagcccggccgcttctgccgtgctgtgtctctggtgtgtgcccccgtct
ggccggcaaccccagggaaagatccgcgcatccgtcccctccttccagaactttaagatg
cctgaggatttcacaaatacattgaatgagggaaaaattattctgtggatagaagatcta
tgtcaaagattgctggttggagctcctcgggagaaggcctttccagcccaacaagccaac
agaacaggcggactgtacagctgtgacattgcatctccaaatacaaattgcctgcgtgtc
aaatttgatgaggagactgaccctaagatggagagtaaagaagaccaatggatgggtgta
actgtccagagtcaggggcctggaggaaatgtggtgacgtgtgcgcatcgctatgagaaa
aggcagtatgtaaacacagtgcaggaaacccgggatatcattggaaggtgctatgtgctg
agccaggacctcactattaaggatgatatggataatggagtatggagtttctgtgatggt
cgtttaagaggccatgagaagtttggttcctgtcagcaaggtgttgctgctacttttacc
agagactatcattatattgtgtttggtgccccaggcacttacaactggaaaggggtggtt
cgtgcagagcaaaagaatcagacattttatgatctgggtatctttgatgatgggccttac
gaagttggtgatgagagccgccaggataagaatctagttcctgttccagctaacagttac
ttaggtttctctttggactctggtaaaggaattgtctcccaagatgagatgacttttgtg
tctggtgccccaagagcgaaccacagcggagcagttgttttactaaaaaaagaaaaaaat
cagagagcactttccctggagcacatgtttgaaggagaagggctggcctcctcttttggt
tatgatgttgctgttgtggacctcaacagtgatggctggcaggacatcgttgttggggcc
ccgcagtactttgacagaagtggggatatcgggggtgccgtatacatctacatgaaccat
caaggcaagtgggcaggggtgaagcctctgcgcttaaatggaaccgctgactccatgttt
ggacttgcagtagaaaatgttggggacattaatcaggatggatatccagatattgcagta
ggggctccatatgatggttttggcaaagtatacatatatcatggatccgagaatggaata
aatacaaaaccagcacagattcttgatggtgaaaaaacaaacaccaatttctttggttac
tctattgctggaaatatggacctggataaaaattcctaccctgatgttgctgttggttcc
ctgtcagattctgtaaacgtgtacagatctcggcctgtgataagcattagaagaaacatt
acagtacagcctgacagaattgatctaaagaaaaagaaccctgaggaccatggtgaaatc
aggatggatgtgaaagcatgttttaaatatactgcaaaccccagaaatttaaatccaaga
ataaagatcaattacacgtttgaagtggaaaatgagaggcggcagctggggctgccctcc
agggtgcgcttcagtgaccactcgtctgatcagttcactgcaagtacaaccctcagggga
cagaactcatgggagtgtgtgactacaaagcttatactgcaggaaaaaattaaagataag
ctacgtcccattccaatatcagtcagtgttaaaattgctggactggagtcaccatccaag
agaaaagagagcgcacttccagatcttataccaattctaaattcaaatgaatctgaaaca
gacaccacaaaagtggagttcttaaaagaaggctgtggagaagacaatgaatgtcacagc
aatcttaagcttcagtaccggttttgtacgagagagggaaatgaagacaggtttacttat
ttaccacttgaaaatggcatgccagtgcttgttctgaaagaccagaaagatattgccctg
gaaataacagtgacaaacaatccatctgatacaaaaaatccacaaaaagatggtgaagat
gcatatgaagctaaactaattgcaacttttccagacagtctgacatactctgcattcaga
gagatgaggggttatcctgaaaaacagctaacatgtggtgctaaccaaaatggttctcaa
gcagagtgtgaacttggaaatcctttcaaaagaaattctaatgtaaccttttatctgatc
ttaagtaccactaaggttaatgttgatacaacagacttagacattaacctgaagctggaa
acaacaagcactcaagttaatttgactccaattatagccagcgctaaagtggttcttgaa
ttgcttttatcactcactggagttgctaagccttctcaggtatattttggaggtaacatc
attggtgagagtgcagtgaaatctgaagatgatattggaaacctcatagagtatgaattc
agagtaactaacttgggcagaccactgaaaacatttggcactgcttccttggacatccag
tggccgaaagaaattagtaatggcaaatggctgctttatctgatgaaaatagactccaaa
ggcttggaaaaagtctactgtcaacctgagaatgaaatcaacagtttgcgtgttgcggaa
tcccataactcaagaaggaagcgtgaagttgcagagaagcagattacagacagccaggca
ttttctttattctcagaaagaaaatataaaaccttgagctgcaatgcgaatgcacgctgt
gtggatataaagtgtcccctgaagggtttagacagcaaggcatctattgtgctgcgttcc
aggctgtggaacagcaccttcttagaggaatactccaaaatgaattaccttgacattctt
gttagggcttctatcagtgttcctgctgcggctaagaatgttaaactcacaaatgaagtt
gctcaggtgcgtgttactgtatttcctgcaaaaccagtagccctttatacaggagttccg
tggtggatcattgcagtggctatccttgctggaatactcatgcttgcactgttggtattc
ttactatggaagtgcgggttcttccggcgttccaggtacgaagacagtgtcccccgctat
cacgctgtaagaattcgaaaagaggagcgacagatcaaagatgggaaaaaccaagatctt
gagataaaacagtggttcaccaaatggaatgaaaatgaaagttattcttag

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