KEGG   Vidua chalybeata (village indigobird): 128790827
Entry
128790827         CDS       T11587                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
vcha  Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:vcha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcha03032]
    128790827 (RIF1)
DNA replication proteins [BR:vcha03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    128790827 (RIF1)
SSDB
Motif
Pfam: Rif1_N Polysacc_syn_2C
Other DBs
NCBI-GeneID: 128790827
NCBI-ProteinID: XP_053803906
LinkDB
Position
7:37626449..37661792
AA seq 2270 aa
MSAPGADPDPSPGPAAGSSLGPLLRTLEDPAAPPGELTDAHLTVVSRLSGEGGKAFTADF
RKHFPQLCKVFKAHISSPNLELSNAALQALGFCTFNSNNTAELSASEMQDLLAAVNSVAV
KSSDKNTRTRALWVISKQAFPPEIVKKEVSNILSTLETILTKGEVQSVVVEYEALNVIIR
LMEQAPAQMGEEAVRWAKLIIPLVVHSAHKVQLRGATALEMGMPLLLQKQQEVAAVTEHL
MTTKLIAELQKLFSSKNETFVLKLWPLFVRLLGKTLHRSGSFINSLLQLEELGFRSGSPV
VKKIAFIAWKSLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTKLEVWWYLLMR
LGPHLPSNFEQVCVPLIQSTLSVDPAAAFPGTPSRPNNPSLGSATPGQKSGSFLFVSPGT
PRMALNSSTAGVLLFPSIQLLGIEMLLHFLMGPQVVDFAKQNKLVLSLEPLQYPLISSPS
FFCKHASTLIHAVQDGFIAIGKEVPDCLLNVIWKDINGYVKTAIEAGNKKEKQGSEILTM
LLQALKTTVRSNSLPVQKILSLIDITVKELPPKVLGSPAYQVADMDLLNGTPALFLIQLP
FHNNLLECCVTDERFFGILEALVGVALCGPTSALAFSESVLGVIDQSAEQVGNKEHLWRM
WSIVVNPLTEWINQNNEVNQGDALEHNFSAVYSALLLPVSHIFPTQGFPQPTLKSLLRSW
SDLYRAFARCAALVATAEENLCCEELCAKIIAGLEGETPVVFPMLEGLTHLVSVMVDCIN
FAPYGTKFQPKNRSPQTPTDWAKKKKEPLGKLSSLFKLLLMLLSSFHELSCSEVHAESLS
ALGPSLLAAVHAVVSRISLPSLLGTTLAIFSQPLAVFYEKTKLPEVPKVYSNLNSKLEKL
LAEILQCLQCHCPGSCDTELLQQLSPVLCVGFQHRNKQIRQQSAQLWNCTFAKASSLAYP
EQLKSVLSQAKKKIPLLLPGFESIEMSEECSGPFSDLMENSQLDAKISGMEVKVGQKRDS
ILAQTSEPKSDGKDKPSNVQATPAKLKLEFSSPKTTSETLLEEEKSVDFVFIPPETKPRI
LTEHQKEVLRSKRADIPAMYNNLDASQDTTSFSQYSQSQDSSLEMPPSVENAKEDTANQP
QEENVGSEGCRSEESPACTSEGQAEKEAAEMIPEETPTGEGLETSSVEAAAQEASAGQED
TSDVTSSSASSDIISGTPQPVSRRQSFITLEKFGAAESRPFSPAPLSSVAELPASAPEAA
TQESSSGSKAGAKAEKSGEEDKNPPKAEPAAGAVAARRVTRRQSRMELQGNKSKLLSRPE
ESLAPDSLESSAELGSAGEDVEHVLLSHSQTLLSTEADIQKAEDAIAEMAQGLDMDSKEN
TPPDSSSCSEQAPGDDSQVPQVSPHQKQLRRSSRRRPDAVESSGSQEKEDGLPKRDRRKE
EEKAGQKKPSQGKGDGSQKQKGIPGKTTENTKESSQPERGAEDWSSKDSPACRGLDEESR
RAEDSPRAEGEGQGSLSTAGQKVERPRYHTRRSSQGLLSSIENSEADSSEGKEESTRKKK
PTKVRSRNNSLEGKLKEGQAGSQSLEGSAQGNETKSPLEARKGEPEDSTGAAVPAEPGGL
EKQEIAAAAGGAVGSGSSESPGALQDTSVEQSKGDASMESLGSPCVSEQDGRAAEESKEE
KQSSTGDCAPAANVPGAEPSSLQSPDCQNKRSKRVKKIKSCDCCFKKPKQQVTESKFTES
KQEKAAELEEPESTPVQTPGNVSGHSDLEERLALAPCGMSTPLHPPKEPSTFSLESQDMD
VGNLQGSSVGVEEENAEGPAAETTESMEEIKEPAEQKEQTEQVLPESVPGEPRESCLDSG
EPEEEPAAAEKEEISENGQLEEVPEELSVDSKPEQKEMQELLEGNQEDKGEAENSAGETC
VVPDQEMKDELVETEIKVPESVALADVSVDSPLKVEGDPSVQVAESPTSLQARCTWSPSA
SPSTSILKRGVKRSQEDDSLSPANKIRRVSFANPIFQEGLADDIDRRSPVVRSHSSPSSR
SLKILSNMQHITTPTKGFLSPGSRTLKFKSSKKCLITEMAKESLPCLSEFVYPALAGCKA
PVDVILPQITSNICARGLGQLIRAKNIKTVGDLSTLTALEIKTLPIRSPKVSNVKRALKG
YHEQQVKSRVLEESTVLEDAEKPGNDVEEKSLSGDEEKLAADLVDAGSSSSSEQPPVDLL
GQIQALAAQLSPEDLQGYSGRQLLEMQEQLLGMASSILRSLQARWPQGPE
NT seq 6813 nt   +upstreamnt  +downstreamnt
atgagcgctcccggcgccgatcccgatcccagccccggtcccgccgccggctccagcctc
ggcccgctgctccgcaccctggaggaccccgccgcgccgccgggagagctgacggacgcg
cacctcaccgtcgtcagtcgcttgagtggcgaagggggcaaagcattcactgcagatttc
aggaaacacttccctcaactctgcaaggtgttcaaggcacacatttccagtccaaatttg
gagctcagtaatgcagcactgcaggccttgggcttctgcacttttaattcaaacaacaca
gctgaattatctgcctctgaaatgcaggacttgctggcagcagtgaacagcgttgctgtg
aaatcctcggacaagaacacgcgcactcgggcactttgggtcatctctaagcaggcattt
cctccagaaattgttaaaaaggaggtgtccaacatcctctctaccctggaaacaatcctg
actaaaggagaagttcagtctgttgtggttgaatatgaagcacttaatgtcattatacgc
ttaatggagcaagctccagcccagatgggagaagaggctgtgaggtgggcaaagctgatc
atccctctggttgtccactcagcacacaaagtgcagttaagaggtgccactgccctggag
atgggaatgccactgctcctgcagaagcagcaggaggtggcagctgtcaccgagcacctg
atgaccacaaaattaattgccgaacttcagaaattgttttcttccaaaaacgagaccttc
gtgttaaaactgtggcccctgtttgtcagattgcttggaaagactctgcatcgcagtggc
agcttcatcaactccctgctgcagctggaggagctgggcttccgcagtggctcccctgtg
gtgaagaaaattgccttcattgcctggaagagcctcattgataattttgctctaaatcca
gacatcctgtgcagtgctaagaggctgaaactgctgatgcagcccctgagctccatccac
gtgaggacagaggctctggccctgaccaagctggaggtgtggtggtatttgctgatgaga
ctgggacctcacctgccctcaaactttgaacaggtttgtgtcccattaatccaaagcacc
ctgagtgtggatcctgctgctgcattcccaggaacgccctcacggccaaacaaccccagc
ctgggctcagcaacccctgggcagaaatcaggttctttcctgtttgtgagcccaggcacg
cccaggatggccctgaacagcagcacagcaggagtgctgctcttcccttccatccagctc
ctgggcattgaaatgctgctccacttcctcatgggaccacaagttgtggattttgctaag
caaaacaagctcgtgcttagtttagagcctctccagtacccactgatcagtagcccttct
tttttttgtaagcatgccagcactctgatacatgctgttcaggatggctttattgcaatt
ggaaaagaagttcctgattgtttgctgaatgttatctggaaggacataaatggatatgta
aaaacagcaattgaagcaggaaacaagaaggagaagcaaggctcagaaatcctgaccatg
ttactccaggctttaaaaaccaccgtgagatccaattctctgcctgtgcagaaaatcctg
tctctcattgatatcactgtcaaggagttgcctccaaaagtcctgggatccccagcttat
caggtggctgatatggatcttttaaatggaactccagctctgttcctaatccagctgcct
ttccataacaatctcctggaatgctgtgtgacagatgagaggttctttgggatcctggaa
gccctggtgggggttgccctgtgtgggcccacctctgccctggctttcagtgagtctgtg
ctgggtgtcattgaccagagtgcagagcaggtgggcaacaaggagcacctctggagaatg
tggagtattgttgttaaccctctgacggagtggattaatcagaataacgaggtgaaccag
ggggatgccctggaacacaacttcagtgctgtctacagtgctttgctgctgccagtatcc
cacattttccccactcagggattcccacagccaactctgaaatccttgctgcgctcttgg
tctgacctgtatcgagcttttgctcgctgtgctgctctggtggcaacagcagaagaaaac
ctgtgctgtgaagagctttgtgccaaaataatagctgggctagaaggtgaaactccagta
gtgtttcccatgctggaaggtctcacccacctcgtgtcagtcatggttgactgcatcaac
tttgcaccctatggcactaaattccaacccaaaaacagatctccccagacacccacagac
tgggctaagaagaagaaggagccccttggcaagctgagctctctcttcaagctgctgctg
atgctgctgagctccttccacgagctgagctgctccgaggtccatgcagagtccctgagt
gccctgggcccttccctgctggccgccgtgcacgccgtcgtcagccgcatctcgctgccg
tcgctcctcggcaccaccttggccatcttctcccagcccttggcagtgttctacgaaaaa
accaagctccctgaggtacccaaagtctacagcaatctgaacagcaagctggagaagctg
ctggcagagatcctgcagtgcctgcagtgccactgcccgggctcctgtgacactgagctc
ctgcagcagctcagccccgtgctctgcgtgggcttccagcacaggaacaaacagatccgc
cagcagagcgcccagctctggaactgcacctttgccaaggcctcctcactcgcctatccc
gagcagctgaagtctgtgttaagccaagccaaaaagaaaatccctctgctgctgcctggt
tttgaaagcattgagatgtctgaggagtgcagtggccccttctctgacctgatggagaat
tcccagctggatgcaaagatcagtggaatggaggtgaaggtgggacagaaacgagattcg
atattggctcagacgagtgaacccaaaagtgatggcaaggacaagcccagcaacgtgcaa
gcaacacctgcaaagttaaaactagaattttcatctcctaagacaacaagtgagacactt
ctggaagaggagaaatctgttgattttgtgttcattcctccagaaacaaaaccaaggata
ttgacagaacatcagaaagaagtgcttaggtcaaagagagctgacattcctgccatgtac
aacaacctggatgcttcccaggacaccacctcgttttcccagtacagccagagccaggac
agttctttggaaatgccaccttcagtagaaaatgccaaagaagacactgcaaaccaacct
caggaggaaaacgtggggagtgaaggatgtcgctcagaggagagcccagcctgcaccagc
gaggggcaggccgaaaaggaggcggctgagatgatcccagaggaaacacccactggagag
ggattggagacaagttctgtggaagcagctgcccaggaggcctcagcagggcaggaggac
acctcagatgtcaccagcagctcagcctccagcgacatcatctctggcaccccccagccc
gtgagccggcgccagtccttcatcaccctggagaaattcggggctgcagagagcagaccc
ttcagcccagccccactgagctccgtggcagagctgcctgcgagtgctcccgaggcagcc
acgcaggaaagcagcagtggcagcaaggctggtgctaaagcagagaagtctggagaggaa
gataagaatcccccaaaagccgagcctgccgcgggggccgtggccgcccgcagggtgacg
cggcggcagagcaggatggagctgcagggcaataaatccaagctcctgagcaggccagag
gagtccctggcccctgacagcctggaaagcagcgctgagctgggctctgcaggggaggac
gtggagcacgtcctgctcagccactcccagactctgctctccacggaagcagacatccag
aaagccgaggatgccatcgcagaaatggcccaggggctggacatggactcgaaagaaaac
acccccccagacagcagcagctgctctgagcaggccccaggggatgacagccaggtgcca
caagtgtcccctcaccagaagcagctgcggcgctcctccaggagacgcccggacgctgtg
gagagctcgggcagccaggagaaggaggatgggctcccaaagagagacaggaggaaagag
gaggagaaagctggccagaagaagccgtcccaggggaaaggggacggatcccaaaaacag
aaaggaatccctgggaaaacaacagaaaacacaaaagagagcagccagcctgagaggggg
gcagaggactggagctccaaggactctcctgcttgcaggggcctggatgaggagagcagg
agggcagaggattcccccagggcagagggggaggggcagggcagcctcagcacagcaggg
cagaaggtggagcgcccacggtaccacaccaggagatcttcccaagggttgctgtccagc
atagaaaactctgaggctgacagctctgagggcaaggaggagagcacaaggaagaaaaaa
cccacgaaagtgaggagtagaaacaattctcttgaaggtaaattgaaagagggacaggca
gggagccagagcctcgagggatctgcccagggaaatgaaactaagagtcctctggaggcc
aggaaaggtgagcccgaggacagcacaggtgctgcagtgccagctgagccaggtggcctg
gaaaagcaggaaattgctgcagctgctggaggagctgtgggctctggcagctctgagagt
ccaggtgctctgcaggacaccagcgtggagcagagcaagggcgatgcatccatggagtca
ctgggcagcccctgtgtgtctgagcaggatgggagggcagcagaggagagcaaagaggag
aagcaaagcagcacaggggactgtgcaccagcagcaaatgttccaggtgctgagccctcc
tctttgcaaagccctgactgccagaacaagaggagcaaaagggtgaaaaaaatcaagagc
tgtgattgctgctttaaaaagccaaagcagcaggtgactgaatcaaagttcactgagtca
aaacaggagaaagctgctgagctggaggagcctgagagcaccccagttcagacccctggg
aatgtttctggtcactcagatttggaggagcgcttggccctggctccgtgtggaatgagc
actccattgcaccctcccaaggaacccagcaccttcagcttggaaagccaggacatggat
gtgggaaacctgcagggaagcagtgtgggggtggaggaggagaatgcagagggtccagca
gctgaaaccaccgagtccatggaggaaataaaggagcctgctgagcagaaggagcaaaca
gaacaggttctgcctgagagtgttcctggagagcccagggagagctgcctggactcaggg
gagccagaggaagaaccagcagctgcagaaaaggaggaaataagtgaaaatggacaactg
gaggaggtgcctgaggagctgagtgttgacagcaaacctgagcaaaaagagatgcaggag
ctactagaaggaaatcaggaggataaaggagaagctgagaactctgctggagaaacttgt
gttgttccagatcaagagatgaaggatgaactggtggaaactgaaatcaaagtgcctgaa
agcgtggccttggcagatgtgagtgtggattcccctctgaaggtggaaggggacccctca
gtgcaggtggctgaaagccccaccagcctccaggcccgctgcacctggtccccctcagcc
tccccatccaccagcatcctcaagagaggggtcaagaggagccaggaggatgattccctg
tcacctgccaataagatccgtcgagtctcttttgcaaatcccatttttcaggagggcctg
gcagacgacatcgacaggaggagtcctgtcgtcagatcccattcctcaccctcctccagg
agcctgaaaatcctctctaacatgcagcacattaccactccaaccaaaggatttctgtcc
ccaggatctcgtacccttaaatttaagagctcaaagaagtgtttaatcacagaaatggcc
aaggaatctctgccgtgcctctcggaattcgtgtaccctgccttggctggctgcaaagcc
cctgtggatgtcattttacctcagatcacatccaacatctgtgccaggggcctggggcag
ctcatccgagccaagaacatcaagaccgtgggagacctgagcactctgacagctctggag
atcaaaaccctccccatccgctcccccaaagtctccaatgtcaaaagagctctgaaggga
taccatgagcaacaggtaaaatctcgagtgttggaggaaagcacggtgcttgaagatgct
gagaagcctggaaatgatgtggaggagaaatctctgagtggagatgaggaaaaacttgca
gcagatctggtggacgcaggcagcagcagcagcagcgagcagccccctgtggatctgctg
gggcagatccaggctctggcagcccagctgagccccgaggatctgcaaggctactctggc
aggcagctcctggagatgcaggagcagctgctggggatggcctcgagcatcctgaggagc
ctgcaggcccgctggccccagggccccgagtag

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