Vidua chalybeata (village indigobird): 128791058
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Entry
128791058 CDS
T11587
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04510
Focal adhesion
vcha04512
ECM-receptor interaction
vcha04518
Integrin signaling
vcha04810
Regulation of actin cytoskeleton
vcha04820
Cytoskeleton in muscle cells
vcha05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128791058 (FN1)
04518 Integrin signaling
128791058 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128791058 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128791058 (FN1)
04810 Regulation of actin cytoskeleton
128791058 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128791058 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128791058 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcha04147
]
128791058 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
vcha00536
]
128791058 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
vcha04990
]
128791058 (FN1)
Membrane trafficking [BR:
vcha04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
128791058 (FN1)
Exosome [BR:
vcha04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
128791058 (FN1)
Glycosaminoglycan binding proteins [BR:
vcha00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128791058 (FN1)
Domain-containing proteins not elsewhere classified [BR:
vcha04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
128791058 (FN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
Fn3_VIN3
Fn3_Dep-1_3rd
fn2
Fn3_Dep-1_2nd
Fn3_ROS1
FN3_Tor_3rd
fn3_2
Ig_RIMBP2
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
128791058
NCBI-ProteinID:
XP_053804368
LinkDB
All DBs
Position
7:3466971..3518741
Genome browser
AA seq
2483 aa
AA seq
DB search
MPGRTVWRLALLALCLGAAAAGGHRRGAGGKSRRQAQTQTTSLPQGTAAQGKQTCYDNGR
YYQINQQWERTYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPKD
SMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEW
TCKPVAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDHDTK
TSYRIGDTWSKKDNRGNLLQCVCTGNGRGEWKCERHTSLHTTSTGSGSPSITNVQTALYQ
PQPQQPQPQPYGQCITDNGVVYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAVTQTYGGN
SDGEPCVLPFTYDGRTFYSCTTEGRTDGHFWCSTTSNFEQDRRYSFCTEQNVLVQTRGGN
SNGALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEICTTND
GVMYRVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHKR
HDEGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGVRYQCYCYGRGI
GEWHCQPLQTYPGSAGPVQVIITESTNQPNSHPIQWNAPERSHITQYILRWRPKNSGRQW
KEATIPGHRNSYTISGLKPGVIYEGQLISVQQYGHKEVTRFDFTTTSTTAVTSNTVSGET
TLLPPVVATSESVTEITSNSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSV
NIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPDHTVESVDDTSIVISWSRPQ
APITGYRIVYVPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTPVFIQ
QETTGVPRTDEVPSPRDLQFVEVSDIKITIMWTPPQSQVSGYRVEVIPVNRPGQHGQRLP
ITRSSFAEVIDLIPGTTYLFKIFAVNQGRESKPLTGEQTTKLDAPTNLRFLNTTEHSVLV
LWTRPRAVITGYKLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVAVKGDLQS
NRETGVFTTYQPAGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREVISDS
GSIVISGLTPGVEYTYSLTVLMDGQERETPIVRRVTTPLAPPTNLRLKSNPDTGILIVSW
ERSTSPGISGYRVTTAPTDGQQGSTLEEVVGADQTTCTFENLSPGVEYNVSVYSVKDDQE
SVPISETITPEVPQLTDLSFVDITDSSIGLRWTPLNASTIIGYRITVVAAGESVPIFEDF
VDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTMR
VTWTAPTSIVLSGFLVRYSPAKKEDDVAEVTVSPSDNMVILTNLLPGTEYLVRVYSVSEQ
HESAPLYGIQKTGLDSPTGLDFSDITANSFTVHWIAPRATITGYRIRYQPEQGGGRPKED
RVPPSRNSITLTNLLPGTEYVVSIIALNGREESLPLVGQQTTVSDVPRDLEVTPTGPTSL
RISWDAPAVTVRYYRITYGETGGSSPVQEFTVPGTMSTATITGIKPGVEYTITVYAVTGR
GDSPASSKPVTVTYRTEIDTPSQMQVTDVQDNSISIRWLPSTSPVTGYRVSAVPKNGHGP
SKTKHVPADQTQVTIEGLQPTVEYTVTVIAQNQNGESQPLVQTAVTNIDRPKGLTFTEVD
VDSIKIAWESPQGQVTRYRVTYSSPEDGIHELLPAPGGEEDTAELHGLRPGSEYTINIVA
IYDDMESLPLTGTQSTAIPPPTNLKFTQVTPTSLTINWNAPNVRLTGYRVRVTPKEKTGP
MKEINLSPDSTSAVVSGLMVATKYEVSVYALKDSLTSRPAQGVVTTLENVSPPRRPRVTD
VTETTITITWRTKTETITGFLVEAVPAGGQNPIQRTISPELRSYTITGLQPGTDYKIYLY
TLNENARSSPVVLDASTAIDAPSNLRFLTTTSNSLLATWQPPRAKITGYIIRYEKPGSPV
KEVLPRPRPGTTEATITGLEPGTEYIIYIIAVKNSQKSEPLVGRKRTDDLPTLISRPHPN
QPDILDVPSIDEGTPYLTNNRYDNGNGIQLPGSSGHPQTVGHQGQQVFFEEHGYRRPGPT
TATPLRPGSRQPLPSVDEAIEIPGYQVPIVVEPLYPHSRGPRRNDSAGQEALSQTTISWR
PLLESSEYIISCQPVSQDEDTLQFRVPGTSSSATLKGLTRGATYNIIVEALKDHRRQKVL
EEVVTVGNTVSEGLNQPADDTCFDTYTGSYYSIGEEWERLSETGFKLWCQCLGFGSGHFR
CDSSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCEPHETTCYDDGKMYHV
GEQWQKEYFGAICSCTCYGGQQGWRCDNCRRPSVEVAPEGSAGHTYTQFTQRYHQATNTN
VNCPIECFMPLDVQADTQQPRGK
NT seq
7452 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccgcaccgtgtggcggctggcgctgctcgccctctgcctgggggccgcggcg
gcggggggacatcgccgcggagccggcggcaagagccggcggcaggcgcagacccaaacc
acctcgctgccgcagggcaccgccgcgcagggaaagcagacctgctatgacaatggacgg
tactatcagataaaccagcagtgggagcgcacttacctgggaaacactctggtctgtacc
tgctacggtgggagccgagggttcaactgcgagagcaagcccgaacctgaagagacctgc
tttgacaaatacactggatccacttaccgggtcggggagacctatgagcgccccaaggac
tccatgatctgggactgtacttgcattggagctggacgtgggagaatcagctgcaccatt
gccaatcgctgccatgagggtggccagtcctacaagatcggcgatacgtggcgccggccc
cacgaaacgggcggctacatgctggagtgtgtgtgcctgggcaacggcaagggcgagtgg
acctgcaagcctgtggccgagcgatgctacgacaacacagctgggacgtcctatgtggtg
ggagagacctgggagaagccctaccagggctggatgatggtggactgcacctgcctcggt
gagggcagcggccgcatcacctgcacctccagaaatcgctgcaatgaccacgacaccaag
acttcctacaggattggagacacctggagcaagaaggataaccgtgggaacttgctgcag
tgtgtctgcaccgggaacggcagaggcgaatggaagtgtgagaggcacacgtccctgcac
accaccagcactggctctggctcccccagcatcacgaacgtgcagacggcgctgtaccag
ccccagccgcagcagccccagccccagccctatggccagtgcatcacggacaacggcgtc
gtctactcggtgggcatgcagtggctcaagacacagggcagccagcaaatgctgtgcacc
tgcctgggcaacggagtcagctgccaggagatagccgtgacccaaacatatggtggcaat
tctgatggagagccctgtgtcctgcctttcacctatgatggaaggactttctattcctgc
accactgaaggccgcacggatgggcacttctggtgcagcaccacttccaatttcgagcag
gacaggagatactccttctgtactgagcagaacgttttggtccagacacgtggtggcaat
tccaatggtgctctgtgccacttccccttcctgtacaacaaccgcaactacaccgactgt
acttccgagggacggagggacaacatgaagtggtgtggaaccactgagaactacgatgct
gaccagaagtttgggttctgccccatggctgctcatgaagaaatctgcacaaccaatgat
ggtgtcatgtaccgtgttggggaccagtgggataagcagcatgacatgggccacatgatg
agatgtacttgtgtaggaaatggccgtggagaatggacctgcattgcttattcacagctc
agagaccagtgcattgtggatggcatcacctacgacgtgaaccagaccttccacaagcgc
catgatgaggggcacatgctgaactgcacctgctttggccagggccgggggagatggaag
tgtgatcctgttgaccagtgccaggactccgaaacccgcaccttctaccaaattggagac
tcctgggagaagtatgtccatggggtcagataccagtgctactgctatggtcgtgggatt
ggagaatggcattgccagcctctgcagacctacccaggctcagctggacctgttcaggtg
atcatcacagagagtacaaatcagccaaactcccaccccatccagtggaatgctcctgaa
cgatctcacatcacccagtacatcttgcgctggagacctaaaaactcaggaaggcagtgg
aaggaagccaccatccctggccaccggaactcctacaccatctcaggcctgaagcctggt
gtgatttatgagggacagctcatcagtgtccagcagtacggccacaaagaagtcacccgc
tttgattttaccacaaccagcaccacagcagtgacaagcaacactgtttcaggagagaca
actcttcttcctcctgtggttgctacttcagaatctgtcactgaaatcacatccaacagc
tttgttgtctcctgggtttctgcttctgacaccgtttctggattccgtgttgagtatgag
ctgagcgaggagggtgatgaacctcagtaccttgatcttccaagcacagccacttctgtc
aacatccctgacttgcttcctggtcgcaagtatattgttaatgtctaccagatctctgaa
gaaggagagcagaatctgatcctgtctacttcacagactacagctcctgatgcaccaccc
gaccacacagtggaaagtgtggatgacacatccattgtcatcagctggagcagaccacag
gctccaatcacaggctacaggattgtctacgtaccctctgtggaaggcagcagcacagag
ctcaacctgcctgacactgccacctctgtgacactcagtgacctgatgccaggggttcag
tacaacatcagcatctatgctgtggaagaaaaccaggagagcactcctgtcttcatccag
caggaaaccactggggtcccacgcacagatgaagtgccttcccccagagatctgcagttt
gtggaggtttctgacatcaagatcaccatcatgtggaccccaccccagagccaagtgtcc
ggctatcgggtggaggtgatccctgtcaaccggcctggccagcacggccagagactgccc
atcaccaggagctcttttgctgaagtcattgacctgatcccaggaacaacctatctcttt
aagatctttgctgtaaaccagggcagggagagcaaacctttgactggagagcaaaccacc
aagctcgatgcccccaccaacctgcggttcctcaacaccacggagcactcggtgctggtg
ctgtggacgcggccccgcgccgtgatcacgggctacaagctgacagcagggcccaccaga
ggagggcagccccgcacctacaacgtgggaccctctgccaccaagtacctcctgaggaac
ctgcagcctggcaccgagtacaccgtgtacctcgtggcggttaaaggcgacctgcagagc
aacagagagaccggggtcttcaccacttatcagcctgctggctctgttcctccttttaac
acagaagtgactgagacctctattgtcattacctggacacctgccccaaggattggtttc
aagctgggagtgcgcccaagccagggcggagaggctccccgggaggtgatctccgactcc
ggcagcatcgtcatctctgggctgacccccggcgtggagtacacctacagcctcacagtg
ctgatggatggccaggagagagagacccccatcgtcaggagagtcactacaccactggct
ccaccgaccaacctgcgcctgaagtccaatcctgacactggcatcctgatagtctcttgg
gagagaagcacatctccaggcatcagtgggtaccgtgtgaccactgctcccacggatggg
cagcagggctctactctggaggaggtggtgggtgcagatcagaccacctgcacctttgag
aacctcagccctggcgtggagtacaatgtcagtgtctactctgtcaaggatgaccaggag
agtgtgcccatctcagaaaccatcacaccagaggtgccccagctcactgacctaagcttt
gttgacataactgactcgagcatcggcctgaggtggaccccgttaaatgcctccaccatt
attgggtaccgcatcacagtagttgcagcaggagaaagtgtccccatttttgaagatttt
gtggactcctcagtaggatactacacagtgacaggcttggagccgggcattgattacgac
atcagtgtaatcacactcattaatggcggagagagcgcccctaccactctgacacagcaa
acggctgtgcctcctcctactgacctgcgcttcactaatgtggggcctgacaccatgagg
gtgacttggactgccccgacttccatcgtgctgagcggtttcctggtgcgctactccccc
gccaagaaggaggatgacgttgcagaggtgacagtctcaccctcagacaacatggtcatc
ttaacaaacctgctccctggcactgaatatctggtgagagtctacagtgtttctgagcag
catgagagtgcacctttgtatggaatccagaaaacaggtcttgattcccccactggcctg
gacttctcggatataacggcgaactccttcaccgtgcactggatcgctcctcgtgccacc
atcacgggctacaggatccgctaccagcccgagcagggcgggggccggcccaaggaggac
cgtgtgcccccctccaggaactccatcaccctcaccaacctgctgccaggcaccgagtac
gtggtcagcatcatcgccctcaacggcagggaggagagcctgcccttggttggccagcag
acaacagtgtctgatgttccaagggacctggaagtcacccctaccggcccaaccagcctc
aggatttcctgggatgctcctgcagtgacagtccgatactaccggatcacttatggtgaa
acaggtggaagcagcccagtacaggagttcacagtgcctggcaccatgtctactgccacc
atcactggcatcaagcctggtgttgaatacaccatcactgtgtatgctgtaactggccgt
ggagacagccctgccagcagcaagccagtcactgtcacctacaggacagaaatagacaca
ccctcccagatgcaagtcactgatgtgcaggacaacagcatcagcatcagatggctccct
tcaacatccccagtcacagggtatcgagtctctgctgtccctaagaatggacatgggccc
tcaaaaacgaaacacgtccctgcagatcaaactcaagtcactattgaaggtctgcagccc
acagtggagtacacggtcactgtcatcgctcagaatcagaacggggagagccagcccttg
gttcagacagctgtcaccaacattgaccgccctaaaggactaacattcactgaggtggat
gttgattccatcaaaattgcttgggaaagccctcaggggcaagtcaccaggtacagggtg
acctactcaagccctgaggatggaatccatgagctattgccggccccaggtggcgaagaa
gacactgctgagctgcatggcctcaggccaggttctgagtacactatcaatatcgttgcc
atttacgatgacatggagagcctgcccctcactgggacccagtccacagcaattccacct
ccaacaaacctgaagtttactcaggtaactcccaccagtctcaccatcaactggaatgca
cccaacgttcgcctcactggctacagagtcagagtgacccccaaagaaaagactggtcct
atgaaagaaatcaacctttctccagacagcacatctgcagtcgtgtctggcttgatggta
gcaaccaagtatgaagtgagtgtgtatgctctgaaggactccctgaccagcagaccagcc
cagggggtggtcacaacccttgaaaatgtgagtccccctcgcaggccccgggtgacagat
gtcaccgagacaaccatcaccattacctggaggaccaagactgagaccatcactggcttc
ctggtggaagccgtccccgcgggcggccagaaccccattcagaggaccatcagccctgag
ctcaggagttacactatcactggcttgcagcctggcactgattacaagatctacctgtac
actctgaacgagaatgcacgcagctccccggtggtgctggatgcctccactgctatcgat
gctccttctaacctgcgcttccttacaaccacgagcaactccctgctggccacctggcag
cctccccgagccaagatcacgggctacatcatcagatatgagaaacctggctcaccagtc
aaggaggtcttgcctcggccccggcccggcaccaccgaggctaccattactggtttggaa
cctggcactgaatacatcatctacattattgctgtgaagaacagtcagaagagtgaacca
ctggttggcagaaaaaggacagatgatctccccacgttgatcagcagaccacaccccaac
cagcccgacatcctggatgtgccttccattgacgaggggaccccttacctcacgaacaac
aggtatgacaatggcaacggtatccaacttccaggctcctctgggcaccctcagacagtg
ggacaccaggggcagcaggtcttcttcgaggagcacggctacaggcggcctgggcccacc
acagccactcccctcaggccgggatccaggcagccgctgcccagcgtggacgaagccatc
gagatcccggggtaccaggtgcccatcgtggtggagcccttgtacccgcactcgcgcggg
ccccggcgcaacgacagcgcgggccaggaggccctgtcccagaccaccatctcctggaga
ccgctgctggagagctccgagtacatcatctcctgccagcccgtcagccaggatgaggac
acgctgcagttcagggttcctggcacttcctctagtgccacactcaagggtctcacaaga
ggggccacctacaacatcatagtggaagccctgaaggaccaccgaagacagaaggtgctg
gaggaggtggtcacagttggcaacactgtgtctgaaggattaaaccagccagctgacgac
acctgctttgatacttacaccggctcctattattccattggcgaggaatgggagcgctta
tctgaaactggctttaagctctggtgccagtgtttaggctttggcagtggccatttcaga
tgtgactcttctaagtggtgccatgacaatggagttaactacaagattggggagaagtgg
gacaggcaaggggagaatggacagatgatgagctgcacctgccttgggaatggaaaagga
gaattcaagtgtgaacctcatgagaccacgtgctatgacgatgggaagatgtaccacgtt
ggggagcagtggcagaaggagtactttggggccatctgctcctgcacttgttacggagga
cagcagggctggcgctgtgacaactgccgcaggcccagcgtggaggtggcccccgaaggc
tctgctggccacacctacacacagttcacacagaggtaccaccaggccaccaacactaac
gtcaactgccccattgagtgtttcatgcccctagatgtacaggcagacacacaacagcca
cggggaaagtaa
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integrated database retrieval system
