Vidua chalybeata (village indigobird): 128791214
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Entry
128791214 CDS
T11587
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
128791214 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcha04040
]
128791214 (KCNMA1)
Ion channels [BR:
vcha04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
128791214 (KCNMA1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
128791214
NCBI-ProteinID:
XP_053804584
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All DBs
Position
8:complement(22689993..23111846)
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AA seq
1292 aa
AA seq
DB search
MANGSGGGSYPGGSGSGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNP
IESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV
YLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVE
NSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFAS
YVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVF
LHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAED
ASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
CLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELV
FAKLKLLMIAIEYKSEKRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEVKRAYFYCK
ACHDDITDPKRIKKCGCKRLATRRAKHMESMPDVEGMYALPNILEKNCSRTVYPCENVTF
ELLPKPMSLLIEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQIDNMDAN
VKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLR
ASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVI
LSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRTSPDNSPVH
GLLRQPSITTGANIPIITELAKPGKLLPLVSISQEKNSGTHILMITELVNDSNVQFLDQD
DDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIA
EENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGI
YRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSY
SSSKKSSSVHSIPSTANRPNRTKSRDSRDKQNATRMNRMGQAEKKWFTDEPDNAYPRNIQ
IKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcagcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggttactttctttgggggactgttt
atcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggcccagaagatcaatggtggtggagatacacaggcagatggagcctgc
aaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacgtctgtg
aaggattgggcaggagtcatgatatctgcccagacattaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaaccca
atagaatcctgccagaatttctacaaagatttcacattacagatcgacatggctttcaat
gtgttcttcctactctacttcggcttgcgttttatagcagccaatgacaagctatggttt
tggctagaagttaactcagtggtagatttcttcacggtccctccagtgtttgtgtcagta
tatttaaacagaagttggcttggtttaagatttttaagagcccttagactgatacagttt
tcagaaatcttgcagtttctgaatatacttaaaacaagtaattccatcaagctagtgaat
ctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacatttggtggag
aactcaggggatccatgggaaaatttccaaaataatcaaccgctaacatattgggaatgt
gtttatttgctgatggttacaatgtccactgttggctatggagatgtttatgcaaaaaca
acccttggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgccagc
tacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gcggttagtggaagaaagcacatagttgtctgtggtcacataacacttgaaagtgtgtcg
aacttcctgaaggacttcctgcacaaggatagggatgatgtcaatgtagaaatcgtcttt
ctgcataatatctcccctaaccttgagctggaagctctttttaagcgacacttcactcag
gtggaattctatcagggttcagtccttaatccccatgacctggcgagagtgaagatagag
tcagcagatgcgtgcctaatccttgccaataaatactgcgctgacccagatgctgaagat
gcctccaatattatgagagttatttccataaagaattatcatccgaagataagaattatc
actcagatgttgcagtaccacaataaggcccatctactaaatatcccaagctggaactgg
aaagaaggggatgatgcaatctgtcttgctgagctgaagctgggtttcatagcccagagc
tgcctggcaccgggcctttcaacaatgttagccaacctcttctctatgaggtcattcata
aagattgaggaggatacgtggcagaaatactacctggaaggagttgcaaatgaaatgtat
acagaatatctgtctagtgcctttgtgggtttgtccttccctgcagtttgtgaactggtg
tttgcgaaactgaagctcttaatgatagccatagaatacaagtcggagaagcgcgaaagc
agaagccgaaagcgtatattaatcaatcctggaaaccacgtcaagattcaagaaggtacc
ttaggattcttcattgcaagtgatgccaaagaagtaaaaagggcatatttttactgcaag
gcctgtcatgatgacatcacggatcccaaaaggataaaaaaatgtggctgcaaacggcta
gccacaaggagagcaaagcacatggaaagcatgcctgatgtggaaggaatgtatgcattg
cctaacatattggaaaaaaattgttcaagaacagtttatccatgtgagaatgtgaccttt
gaactgctgccaaagccaatgagtctgctgattgaagatgagcagccgtcgacactgtca
cccaaaaaaaagcagcgaaatggaggcatgcgaaattcacccaactcctcacccaaactg
atgaggcatgaccccttgttaattcctggcaacgagcagattgataatatggatgccaac
gtgaaaaaatacgactctacagggatgtttcattggtgtccagccaaagacattgaaaag
gttattttgactcgaagtgaagcagcgatgacagttttaagtgggcatgtagtcgtttgc
atatttggggatgttaaatctgctttgattggattaagaaatttagtgatgccattacga
gccagcaactttcactaccatgaactcaagcacattgtgtttgtgggttcacttgaatac
ctgagaagggaatgggagacactgcataacttccccaaggtttcaatcttgcctggtacg
ccattaagtcgggctgatttaagggctgtcaacatcaacctctgcgacatgtgcgttatc
ctgtcagccaatcagaataatattgatgatgcttcgctgcaggacaaggaatgcatcttg
gcgtcactcaacatcaaatctatgcagtttgatgacagcattggggtcttgcaggctaat
tcccaaggctttacaccccctgggatggataggacgtctccagacaatagtccagtccat
ggccttttacgtcaaccctccattacaacaggagccaacatccctattataacagagcta
gctaagcctggcaaacttctgcctttggtttcaatcagtcaggaaaaaaacagtggaacc
cacattctaatgataactgaactggtaaatgattcaaatgttcagttcttggaccaagat
gatgatgatgatcccgacacagaactgtatctcacgcagccttttgcatgtggaactgca
tttgctgtcagcgtgctggactctctcatgagcgcaacatacttcaatgacaatatcctc
acactgatacggacattggtaacaggaggagccacaccagagctggaagcactgattgct
gaggaaaatgcattgagaggaggttacagcacgccccagacacttgcaaacagggacagg
tgtcgagttgctcagctggctttgtatgatgggccatttgcagacctaggggatggaggt
tgttatggagatctgttttgtaaagcactgaaaacatacaatatgctttgctttggaatt
tatcgattaagggatgcacatctaagtactcccagccaatgcactaaacgttatgttatc
acaaacccaccatatgaatttgagcttgtgccgacggacttgatcttctgtctgatgcaa
tttgaccacaacgctggccagtcccgagccagcctttctcattcctcccattcctcctac
tcttccagcaagaagagctcatcagttcactctatcccatcaacagcaaaccgaccgaac
cgcaccaagagcagggattcccgggacaaacagaatgcaacaaggatgaatagaatgggc
caagcagaaaagaaatggtttacagatgagccggataatgcctatcccagaaacattcaa
atcaagcccatgagcactcacatggccaatcagatcaatcaatataaatcgacaagcagc
ttgataccaccaatacgagaagttgaagatgaatgttga
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