Vidua chalybeata (village indigobird): 128792079
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Entry
128792079 CDS
T11587
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128792079 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128792079 (TPR)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128792079 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
Motif
Other DBs
NCBI-GeneID:
128792079
NCBI-ProteinID:
XP_053806160
LinkDB
All DBs
Position
9:complement(29426592..29460334)
Genome browser
AA seq
2373 aa
AA seq
DB search
MAAVLQQLLERAELAKLPRAVQGKLERFLGDQQGEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNETQECQMLREELKKLHEQLKVLNEKNKELEAAQDRNAAVQSQLSREKEEL
EAEKRDLVRTTERRSQEVEHLNEDVKRLNEKLTEANTEKAKLQLKLDELQTSDVSMKYRE
KRLEQEKELLQNQNTWLNAELKAKTDELLHTAREKGNEILELKCSLENKKEEVSRMEEQV
NSLKQSNENLQKHVEELLNKLKEAKEQQTSMEERFHNELNAHMKLSNLYKSAADDSEAKS
NELTGAVEELHKLLKEAGEANKAAQEHLAEVEESKATMEKELREKISKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLHMEKLENRRIN
KYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIHRLQDSADQANKHAS
FFERESQRLEVRVKDLSQQICVLLMELEEARGNHVIRDEAVSSADISSSSEVITQHLVSY
RNIQELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLDEAVSELQQLRESRQHQ
LQLVESIIRQRDMFRILLTQTTGAIIPLQASGVLPEELCLTSTPKRPNLPQSMATPAPVS
MSESVETVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTELRSQNAKISTQL
EFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAE
VRAENLKKEKDILKMSDVRLTQQRDSLLVEQRGQNLLLTNLRTIQGILERSETETKQRLN
NQIEKLEHEISQLKKKLESEVEQRHSLTKNQEVHILDLKRQLETETNRHINTKELLKNAQ
KENAMLKQQLNNTEAQLTSQSSQRPPGKGQPGTNEDVDDLVSRLRQAEEQVNDLRERLKT
SSSNVEQYRAMVLSLEESLNKEKQVTEEVRTTVEARLKESSEYQAQLEKKLMESEKEKQE
LQEEKRKAVENMEQQLSELKKSLSAVQSEVQEALQRASTALNNEQQARRDCQEQAMMASE
AQNKYERELMLHAADVEALQAIKEQVAKNAAVRQQLEEAAQKAESELLESKASWEERERM
IKDEASKLASRCEDLEKQNRLLHEQLESMSNKMVTSMKEAIPTAANVSLSEEGKSQEQIL
EILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREKVQVTAKTIA
QHEELMKKTETMNILIETNKMLREEKERLEQELQQIQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANAKRVQQMSEETGR
LKAEVARTNASLTTSQNLVQSLKDEITKIRTEKDTLQKELDAKVADIQEKVKTITQVKKI
GRRYKTQYEELKAQHDKMVAESSTLPLAEPQEDQVSAQEVQELKDSLNQAEVKTKNLETQ
VESLQKTITEKETEVRNFQEQIMQLQAELARFHQDLQEKTTQEEQLRQQITEKEEKTRKT
LLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALKSQYEGRICRLERE
LREQQERHHEQRDEPPESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVS
TPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVE
HVPVFGSASGSVRSTSPNVQTSLPQPILTVQQQTQATAFVQPTQQSHAQIEPAAQEPAPA
IVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRSREEEEDNTVENSDQISEETVDAPTS
KKLRIMQRVGPEEEVTAEESTDGEVEAQTYNQDSQDSIGEGVTQGEYAAMEDSEETSQSI
PIDLGSLQSDQQNTSSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQEDYDDEEEEDEDDD
EDTGMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPGTETEESMGGAESNQRAADSQN
SGEGSTSAAESTFPHESLREQQPSSASERQGPRPPQSPRRPPHPLPPRLTIHAPPQELGP
PVQRIQMTRRQSVGRGLQLTPGIGGMSLFFQQQHFFDDEDRTVPSTPTLVVPHRTDGFAE
AIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSV
PTTPLQVAAPVTVFTESASADASEHASQSVPMVTTSTGSLSTTTEPGPGDDADEVFAEAE
SEGITSEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSTQPKSLRRVRLQPP
TLRTGVRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgctgcagcagctcctggagcgggccgagctcgccaagctgccccgcgcc
gtgcagggcaagctggagcgcttcctgggcgaccagcagggcgagatcgacgggctgcgg
gcccgtcatgagcgcttcaaggtggacagcgaacaacagtactttgaagtggaaaagcga
ctggctcagagccaggaaagacttgtaaatgagacccaggaatgtcaaatgctgcgggag
gagcttaaaaagcttcatgagcagctgaaggtgctcaacgagaagaacaaggagctcgag
gctgcccaggaccggaacgcggccgtgcagagccagttaagtcgagagaaggaagaactg
gaagctgagaagagagacttggtccgaacaactgaaaggcgatctcaggaagttgaacat
ttaaatgaggatgttaaacgcttaaatgaaaaactcacagaggcaaacacagaaaaggca
aaacttcagctaaagttggatgagcttcaaacatcagatgtttccatgaagtaccgggag
aaaaggctggagcaagagaaagagcttctgcagaaccagaacacatggctgaatgctgag
ctgaaagccaaaacagatgaactgctccatactgccagggagaaaggcaacgaaatcctg
gagctcaaatgcagtctggagaacaaaaaggaggaggtttccagaatggaggaacaggtg
aacagcttgaaacagtcaaatgaaaacctccagaagcatgttgaagaacttttgaataaa
ctgaaggaggcaaaagagcagcagacaagcatggaggagagattccacaatgaactgaat
gcccacatgaaattatccaacttgtataagagtgctgctgatgactcagaggcaaagagc
aatgagctgacaggagcagtggaagagctgcacaagctcctgaaggaagcaggtgaagct
aataaagcagcccaggagcatttggctgaggtggaggagtcaaaagccaccatggaaaag
gagctgagagagaagatcagtaagctggagaaggagctggagaacgccaatgatttactg
tcagctacgaagcgtaaaggagccatcctgtccgaggaggagctggcagccatgtctccc
actgctgcagcagtggccaaagtggtcaagcctggcatgaagttaactgagctgtacaat
gcctacgtagaaactcaggatcaattgcatatggagaagctggagaataggagaatcaat
aaatatttggatgaaatagtgcaggaagtggaagccaaagccccaatcttaaaacgtcag
cgtgaagaatttgagcgttcccaaaaagctgttgcaagtctgtctgcaaagcttgaacaa
gctatgaaggagatccatcgcctgcaggacagcgccgaccaagccaacaaacacgcctcc
ttcttcgagagggagagccagagactggaggtgcgagtgaaggatctctcccagcagatc
tgtgtgctgttaatggaactggaagaagccagaggcaaccacgtgatccgtgatgaagcc
gtgagctctgctgacatcagcagctcttctgaagtgatcactcaacacctggtctcctac
agaaatatccaagagcttcagcagcagaatcagcgtctcctggtggctcttcgggagctg
ggggaggcaagagaaaaagaggagcaggaaacaacatcatctaagatctctgagctgcag
agccagctggatgaggcagtcagtgagctgcagcagctgcgggagtcacggcagcaccag
ctgcagctcgtggagtccatcatccgccagcgggacatgttccgcatcctgctcacccag
accacgggggccatcattcctttgcaagcttcaggtgtgttaccagaggagctctgtctt
acatctactccaaagcgcccgaatttacctcagtccatggcaactcctgctccagtgtcc
atgagtgagtctgtggagactgtggaggccaaggctgctcttaagcagttgcaggaagtt
tttgagaactataaaaaagaaaaggcagagaacgacaagcttctgaacgaacagaatgaa
aagcttcaggagcaggtcacagagttgaggtcacaaaatgccaagatatccacacagctg
gaatttgcctccaaacggtacgagatgctgcaggataacgtggaaggctatcgccgggaa
atcacttccctgcacgagagaacccagaagctcacagcaaccactcagaagcaggagcag
atcattaacaccatgactcaggacctgaggggagctaatgaaaaactggcagtggcagag
gtgagagcagaaaacttgaaaaaagagaaggatatcctgaagatgtcagatgtgcgcctg
actcagcaacgtgactctctgctggtggaacaaagaggacagaacttgctgctcaccaat
ttgagaacaattcagggaatacttgagagatctgagacagaaacaaagcagagactcaat
aatcagatagaaaagcttgaacatgagatatctcagctgaagaaaaaactggaaagtgag
gtggaacagagacattcccttaccaagaatcaagaggttcatatcctggacctaaagagg
cagctggagacggagaccaaccgtcacatcaacacaaaggagctcctgaagaacgcccag
aaggaaaatgccatgctgaaacagcagctgaacaacaccgaggcccagctcacatcccag
tcctcacaaaggcctccagggaaaggtcagcctggtacaaatgaagatgtggatgatctt
gtaagtcgtctgagacaagctgaggagcaagtcaatgacctgagagagaggctcaagact
agttccagtaatgtggagcagtacagagccatggttcttagcttggaggaatccctcaat
aaggaaaaacaagtgacagaggaagttcgtacgacagttgaagctcgtctgaaggagtct
tcagaatatcaggcacagctggaaaagaagttgatggagtcagaaaaagaaaaacaagaa
ctgcaggaggagaagcgtaaagctgtggagaacatggaacagcagctttcagaactgaag
aagagtctgtcagctgtgcagtcagaagttcaggaagctcttcagagagccagcacagct
ctgaataatgaacaacaggccaggagggactgccaggaacaagcaatgatggcttctgag
gctcagaacaaatatgagcgggagttgatgcttcacgctgctgatgtggaggcactacag
gccatcaaagagcaagtcgccaagaacgcagcggtgaggcagcagctggaggaggctgct
cagaaagcagagtctgagctcttggaatccaaagcctcctgggaagagagagagagaatg
atcaaggatgaagcttcgaaacttgcatcccgctgtgaggatctggaaaaacaaaatcga
ttattacatgagcagctggagagcatgagcaataagatggtgacttccatgaaagaagcc
atcccaactgcagcaaatgtttctcttagtgaggaaggcaaatcccaggagcaaatcttg
gaaattcttaggtttatccgtcgggagaaggagattgcggagacgaggttcgaggtggcg
caggtggagagcctgcggtaccgccagagagtggagcacctggagagggagctccaggag
ctgcaggacagcctcaatgctgagagggagaaggtgcaggtaacagcaaaaaccattgca
caacatgaagaattaatgaagaaaactgagaccatgaacatactcatagaaaccaacaag
atgttaagggaagagaaggagaggctggagcaagagctacagcagatacaagcaaaggta
cgcaagctcgaggcagacatcttgcccctgcaagagtcgaatgctgagctcagtgagaag
agtgggatgctgcaggcagagaaaaagctcttggaagaggatgttaaacgctggaaagcc
cggactcagcacttgctgagccagcagaaggacaccgatctcgaagagtatcgaaagctg
ctctctgagaaggaggcaaatgccaagcgtgtccaacagatgagtgaagaaacaggcagg
cttaaagcagaagttgccagaactaatgcatccttgactacaagccagaatcttgttcag
agcctgaaggatgaaataactaaaataagaacagaaaaggacactttgcagaaagaactg
gatgctaaagtggctgacatacaggaaaaagtgaaaactataacacaggtcaagaaaatt
ggtcgcaggtacaagactcagtatgaggagctgaaagcacagcatgataagatggttgct
gaatcatctactctgcctttggcagaaccacaagaagaccaagtttctgcccaggaagta
caagagctaaaagacagtctcaatcaagctgaagtgaagacaaagaatttggagactcag
gttgaaagtttacaaaagacaataacagaaaaggaaactgaagttagaaatttccaggag
cagataatgcagctacaggcagaactggcccgtttccatcaagatctacaagagaagact
acgcaggaagaacaactcaggcaacagatcaccgagaaggaggagaaaacaaggaagact
ttgcttgcagccaagcagaaaattgcacagttagctggtacaaaagagcagctcacaaag
gaaaatgaggagtggaagcagaagagcagctccctggaggagcagaagacggagctggag
gtgcggatgagcgccctgaagtcgcagtacgaggggcggatctgccgcctggagagggag
ctccgggagcagcaggagcggcaccacgagcagcgggatgagcccccggagtccacaaac
aaggtcccggaacagcagaggcaaatctcactcaagtctactccagcttcaggtgaaaga
ggaattgccagcacttcagatcccccaacagcaaatattaaaccaactcctgttgtgtca
actcccagtaaagtgactgctgctgcaatagctgggaataagtctactccaagagccagc
atccgtccaatggtgactcctgccacagtcaccaatcccaccactacccccacagccaca
gtgatgccaacaacacaggtggagactcaggaagccatgcagtcggaaggacccgtggag
cacgtcccagtgttcgggagtgccagtggctccgtgcgctccaccagccccaacgtgcag
acatccctgccccagcccatcctgaccgtgcagcagcagacacaggccactgccttcgtg
cagcccacccagcaaagccacgctcagatcgagcctgcagctcaggagccagcccctgcc
atcgtggaggtggtgcagagctcccagatagagaggccctccacctccacagctgtcttt
ggcacagtttcagctacccccagttcctcactgtctaaacgctcccgagaggaagaggag
gacaacactgtggagaattcagaccagatctctgaggaaacagtggatgcacctacttca
aagaaactgagaatcatgcagagagttgggcctgaggaggaagtgacagcagaagagagc
actgatggagaggtggaggcacaaacatacaatcaagactcacaagactccattggagaa
ggtgtgacacagggggagtacgcagccatggaggacagcgaggagacttcccagtctatc
ccaatagatctgggatcccttcagtcagaccaacaaaacacttcttcatctcaggatggc
cagtccaagagagatgatgtgattgtaattgatagtgatgatgaagatgacgatgatgaa
gaaaatgaaggggagcaggaagattatgatgatgaggaagaggaggatgaggatgatgat
gaagacacagggatgggagatgaaggtgatgacagcaatgaaggaactggtagtgctgat
ggcaatgatggatatgaagcagacgatgctgagggtgctgatggtacagatcctggaacg
gagactgaagagagcatgggaggagctgaaagcaatcagagggcagcagattcccaaaac
agtggagaagggagcacgagtgctgcagagtccacgtttccccacgagagcctgagggag
cagcagccgtcgtcggcgtccgagcgccagggcccgcggcccccgcagtccccgcggagg
ccaccgcaccctctgcccccacggctcaccatccacgcccctccccaggagctggggccc
ccagtgcagagaatccagatgacacgaaggcagtcggtggggcgaggacttcagctgacc
cctgggataggtggaatgtctctttttttccagcagcagcacttctttgatgatgaggac
agaacagttccaagcacaccaactcttgtagttccacatcgtacagatggatttgcagaa
gccattcattccccacaggtagctggagttcctcggttcagatttgggccccctgaagat
atgccacaaaccagctccagtcattctgatcttgggcagctggcatcacaaggaggttta
gggatgtatgaaaccccactattccttgcccatgaggaagaatcagggggtcgtagtgtc
cccacaacaccgttacaagtggcagcaccggtgaccgtgttcacggagagcgcctcggcc
gacgcctcggagcacgcgtcccagtccgtgcccatggtcaccacctccaccggcagcctg
tccaccaccaccgagcccggccccggcgacgacgccgacgaggtcttcgcagaggcagag
tctgaaggcattacttcagaagctggtctagaaattgatagccagcaagaagaagaatct
gttcaagcatctgatgagtcagatcttccttcaactagtcaggatcctccttcaagttca
tctgcagacacgagcagcactcagcccaagtccctgcgccgtgtccggctgcagcccccg
acgctgaggacgggcgtgcgtggccggcagttcaacagacagaggggtgtaactcatgcc
atgggaggcagaggaggcctgaacagaggaaacattagttaa
DBGET
integrated database retrieval system
