Vidua chalybeata (village indigobird): 128792200
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Entry
128792200 CDS
T11587
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04136
Autophagy - other
vcha04140
Autophagy - animal
vcha04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128792200 (ATG4C)
04140 Autophagy - animal
128792200 (ATG4C)
04136 Autophagy - other
128792200 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcha01002
]
128792200 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128792200 (ATG4C)
03029 Mitochondrial biogenesis [BR:
vcha03029
]
128792200 (ATG4C)
Peptidases and inhibitors [BR:
vcha01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
128792200 (ATG4C)
Membrane trafficking [BR:
vcha04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
128792200 (ATG4C)
Mitochondrial biogenesis [BR:
vcha03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128792200 (ATG4C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
128792200
NCBI-ProteinID:
XP_053806385
LinkDB
All DBs
Position
9:complement(6941924..6961317)
Genome browser
AA seq
456 aa
AA seq
DB search
MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTEESGELST
DGSNFDKINTEISGNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL
AQGLMLHFLGRAWVWPEALDMESCDSESWTSSTVRKLTASLEASLAAERDPKVLAQPPAR
RDWDGTERRNEAYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKMAGDWYGPAVVAHILRK
AVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSFVDSGKAGTKAVIILVPVRLGGERTN
TDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDFPLE
SFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVKGHS
RDYDFASSPIHEENDLFSEDEKKRLKRFSTEEFVLL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacggggacagatgaagtagaaaagatcaaatcaaagtttatgtctgcatgg
cacaacatgaaatacagctgggtgttgaaaacaaaaacttacttcagcaggaactctcca
gtttttctgctgggaaaatgttaccacttcaaaactgaggaatctggggagctctctaca
gatgggtccaattttgataaaatcaacactgagatttcggggaacgtcgaggagttccgc
aaagatttcatttctaggatctggctgacctacagagaggaattccctcagatcaagggc
tctgctttaaccacagactgtggctggggctgcacgctcagaacggggcagatgctgctg
gctcagggtctgatgcttcatttccttgggagagcctgggtgtggccagaagccctggac
atggagagctgtgactcggagtcgtggaccagcagcaccgtgaggaagctcacggcctcc
ttggaggcctcgctcgcggccgagagggaccccaaggtcctggcccagccccccgccagg
agggactgggatggcaccgagaggaggaacgaagcttatcacaggaaaatcatctcctgg
tttggtgactccccgctggcagcctttgggctgcaccagctgatagagtatgggaaaaag
tccgggaagatggcgggggattggtacgggcccgccgtggtcgcacacattttgagaaaa
gctgttgaagaagcaagagaccctgagctgcaaggagtaacagtctatgttgctcaggat
tgtacagtctacagctcggatgttattgacaggcagtgctcttttgtggattctgggaaa
gcaggcacaaaagctgtaattatattggttcctgtgagactcggtggagagagaacaaac
acagactacctggagtttgtaaagggaattttaagcctggagtactgtgttggcattatt
ggtggcaaacccaagcagtcctattactttgctggattccaagatgacagtttgatttac
atggatcctcattactgccaatcttttgtagatgtcagcataaaggatttccctcttgag
tcattccactgtccttctcccaaaaagatgtccttcaaaaaaatggatccgagctgcaca
ataggattttactgtaggactgtgcaggacttcgagaaggcttctgaagaaatcaccaag
atgctgaaatcttcatccaaggagaaatatcccctgtttacttttgtcaagggtcattct
agagactatgactttgcttccagtccaatccatgaagaaaatgaccttttctccgaggat
gaaaagaaaagactgaagagatttagtacagaggagtttgtcttgctttaa
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integrated database retrieval system
