Vidua chalybeata (village indigobird): 128793069
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Entry
128793069 CDS
T11587
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04136
Autophagy - other
vcha04140
Autophagy - animal
vcha04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128793069 (ATG4B)
04140 Autophagy - animal
128793069 (ATG4B)
04136 Autophagy - other
128793069 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcha01002
]
128793069 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128793069 (ATG4B)
03029 Mitochondrial biogenesis [BR:
vcha03029
]
128793069 (ATG4B)
Peptidases and inhibitors [BR:
vcha01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
128793069 (ATG4B)
Membrane trafficking [BR:
vcha04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
128793069 (ATG4B)
Mitochondrial biogenesis [BR:
vcha03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128793069 (ATG4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
128793069
NCBI-ProteinID:
XP_053808001
LinkDB
All DBs
Position
10:complement(21590073..21609536)
Genome browser
AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFEYEDFPETKEPVWILGRKYSVFTEKEEILLDVTSRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQVDNYFNVLNAFIDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLATFDTWSSLAVHIAMDNTVVMEEIRR
LCQSNVPCAGAAACPALESDVLYNGCPEDVGLRERLALWKPLVLLIPLRLGLTEINEAYI
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPSDSGCLPDESFH
CQHPPCRMSIAELDPSIAVGFFCNTEADFNDWCQQIKKLSLVRGALPMFELVERQPSHFS
NPDVLNLTPDSSDADRLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctactcttacctacgacaccctcaggtttgagtatgaagacttccctgag
accaaagaacccgtttggatccttggccggaaatacagtgtttttacagagaaggaagag
atcctgttggatgtgacctctcggctttggttcacctacagaaagaacttccctgctatt
ggaggaaccggtcccacctctgacacgggctggggctgcatgctgcgctgtggccagatg
atctttgctcaggccttggtctgcaggcatttgggaagagactggaggtggataaaaggg
aagaggcaggtggataattacttcaacgttcttaatgccttcattgacaaaaaagacagc
tactactccattcaccagatagcccagatgggagtcggggagggaaaatccataggccag
tggtatggaccaaacacggtcgcacaggtgctcaaaaaacttgcaacttttgatacgtgg
agttccctggcagtacacatagccatggacaacacagtggtgatggaagaaatccggagg
ctgtgccagtccaatgtgccatgtgctggagctgcagcatgccctgccctggagtcagat
gtgctctacaatggctgcccagaggacgtggggctcagagagaggcttgccctgtggaaa
ccactggtgctgctgatacctctccgcctcgggctcacagagatcaatgaagcctatatt
gaaacactaaagcactgcttcatgatgccccagtccctgggagtgatcggagggaagcca
aacagtgctcactacttcattggctatgtaggtgaggagctcatttacctggacccccac
accacgcagccggcggtggagcccagtgacagcggctgcctccccgacgagagcttccac
tgccagcaccctccgtgcaggatgagcatcgccgagctcgacccctccattgccgtgggc
tttttctgcaacacagaggcagactttaatgactggtgtcagcaaatcaaaaagctgtcc
ctggtcagaggagcgctgcccatgttcgagctggtggaacgccagccctcacacttctcc
aaccccgacgtcctgaatctcacaccagattcctctgatgccgacagattggaaaggttc
tttgactcggaagatgaagactttgaaatcctgtccctttga
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