Vidua chalybeata (village indigobird): 128793348
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Entry
128793348 CDS
T11587
Name
(RefSeq) B-cadherin-like isoform X1
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04514
Cell adhesion molecule (CAM) interaction
vcha04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128793348
04519 Cadherin signaling
128793348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vcha04515
]
128793348
Cell adhesion molecules [BR:
vcha04515
]
Cadherins
Major cadherins
128793348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
128793348
NCBI-ProteinID:
XP_053808397
LinkDB
All DBs
Position
11:20556390..20562337
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AA seq
882 aa
AA seq
DB search
MRGPRSGLCPLSIFILLLLSPLLPAAALSPAPPCVLPGLRRGPLPAPGSSGGCAGPYRTE
EPDVGVREDGGPVRLPGVGRALAAPPRDAGSPRYAAGQPDPAPITAESRRSPQELPRARA
ALRRQKRDWVIPPIKVPENERGPFPKKLVQIKSNRDRDTKIFYSITGQGADAPPEGIFTI
EKESGWMKVTQPLDREHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVF
RGSVPEGALPGTSIMQVTATDADDAVETYNGVIAYSILSQEPREPHPQMFTVNRATGTLS
VIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIQIADVNDNAPEFDPRMYEAAVPEN
VAGREVARLAVTDLDEPGTPAWRAVYSILRGNDGGAFAITTDPATNEGILRTAKVFVIPR
PSLLPTEESCLSHSHCPCLPLSQGLDYEAKQQFVLHVAVANEVPFIVKLPMATATVTVTV
EDVNEAPVFVPPVQLATVSEDVPPGQTLTACTAQDPDKAQGQRIKYLVGHDPAGWLAVHP
ENGLVTVRDHLDRESPFVKNSTYIAVLLAVDDGSPPATGTGTLLLTLLDVNDNGPEAEPR
DITVCQRSPQPQLLTVTDRDLPPNTGPFRAELTHGSGDSWAVEVGDTGDTVTLQLVAPLE
PDTYSVYLRLLDQPGRAQVTIVTARVCACEGQAQGCPQRSQPVSALPFVLATLGALLALL
LILLLLLLFMRRRKVTKEPLLLPEDDTRDNIFYYGEEGGGEEDQNYDLRQLHRGLDARPE
VIRNDVAPTLLPAPQYRPRPANPDDIGTFIDENLKAADTDPTAPPYDSLLVFDYEGSGSE
ATSLSSLNSSASNGDQDYDYLNDWGGRFRKLAELYGGGEEDD
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggccgcgctccgggctctgcccgctctccatcttcatcctcctcctcctctcc
ccgctcctgccggcggccgccctctccccagccccgccgtgcgtcctcccggggctgcgc
cgcgggccgctgcccgcaccagggagctccggaggctgcgcggggccatacaggacggag
gagcccgatgtcggggtgcgggaggacgggggccccgtgcggctaccgggggtgggcagg
gcgctcgccgcacccccccgagatgctggttctccccgatatgccgctggccagccagac
cctgccccaattaccgcagagagcaggcgctccccccaggagctgcccagggctcgcgct
gctctcaggaggcagaagagggattgggtgatcccccccatcaaagttcctgaaaatgag
aggggccccttccccaaaaagctggttcagatcaaatccaacagggatagagacaccaag
atcttctacagcatcacagggcagggagcagatgcccctcccgagggtatcttcaccatt
gagaaggagtcgggctggatgaaagtgacgcagccgctggaccgcgagcacattgacaag
taccacctcttctcccacgccgtgtccgagaacgggaagccagtggaggagccgatggag
atcattgtgacagtgacagaccaaaatgacaacaagccccagttcacgcaggaggtgttc
aggggctctgtgccagagggagctctgccaggcacctccatcatgcaggtgacagccacg
gatgcggacgatgcagtggagacctacaatggtgtcatcgcctactccatcctcagccag
gagccacgggagccccatccccaaatgttcactgtcaaccgggccactggcaccctcagc
gtgattgccagtggcctcgaccgggagcgtgtgcgggagtacacactgaccgtgcaggca
gctgacctggatggagagggactgaccaccacagcgctggccgtcatccagattgctgat
gtcaatgacaatgcccccgagtttgaccccagaatgtacgaggcggccgtgccggagaac
gtggccgggcgggaggtggcccggctggctgtcaccgacctggacgagcccggcacgccg
gcgtggcgagccgtctactccatcctgcgcggcaacgacgggggtgcctttgccatcacc
accgaccccgccaccaacgagggcatcctccgcactgccaaggtctttgtcatcccacgt
ccctcattgctgcccacagaggagtcctgcttgtcccactctcactgcccctgtctcccc
ctctctcagggtctggactatgaggccaagcagcagtttgtgctccacgtggcagtggcc
aacgaggtccccttcatcgtgaagctgccgatggccactgccacggtgacagtcactgtg
gaggatgtcaatgaggccccggtgttcgtgccgccggtgcagctggccacggtgtcagaa
gatgtgcccccggggcagaccctcacagcctgcacagcccaggaccctgacaaagcacag
ggccagaggatcaagtacctggtggggcacgacccggcaggctggctggccgtgcacccc
gagaatggcctggtgaccgtgcgggaccacctggaccgcgagtcccctttcgtcaagaac
agcacctacatagctgtgctgctggccgtggatgatggctcaccgccggccacgggcacg
ggcacgctactcctcaccctgctcgatgtgaacgacaacggccccgaggccgagccacgg
gacatcaccgtctgccagcgcagtccccagccccagctcctcaccgtcaccgaccgggac
ctgccccccaacaccggccccttccgcgccgagctcacccacggctcgggggacagctgg
gctgtggaggtgggggacacaggtgacacagtgacactgcagctggtggcaccgctggag
ccggacacctacagcgtgtacctgcggctgctggaccagccgggcagagcccaagtgacc
attgtcaccgcacgggtctgcgcctgcgaggggcaggcacagggctgtccccagaggtcc
cagcctgtcagcgccctgcccttcgtcctcgccaccctgggcgcgctactggccctgctg
ctcatcctgctgctgctgctgctcttcatgaggaggaggaaggtgacgaaggagccactg
ctgctgcctgaagatgacacaagggacaacatcttctactacggggaggagggtggcggc
gaggaggaccagaactacgacctgcggcagctgcaccgggggctggacgcccggcccgag
gtgatccgcaatgacgtggcccccaccctcctgccagccccccagtaccggccccgcccc
gccaaccccgatgatatcggcaccttcatcgacgagaacctgaaggcggccgacacggac
cccacggcccccccctacgactcgctgctggtgttcgactacgagggcagcggctcggag
gccacctcgctcagctccctcaactcctctgcctccaacggcgaccaggactacgactac
ctcaacgactggggcggccgcttccgcaagctggccgagctctatggcggcggcgaggag
gacgattag
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