Vidua chalybeata (village indigobird): 128793483
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Entry
128793483 CDS
T11587
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128793483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcha03021
]
128793483
03036 Chromosome and associated proteins [BR:
vcha03036
]
128793483
Transcription machinery [BR:
vcha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128793483
Coactivators
SAGA/TFTC/STAGA complex
128793483
Chromosome and associated proteins [BR:
vcha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128793483
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
128793483
NCBI-ProteinID:
XP_053808669
LinkDB
All DBs
Position
11:2284674..2432490
Genome browser
AA seq
999 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKALSDLVGSLESQLAGGRGPAEPPPPRTSAPSQQPQQES
LAGGSSPGRQQHGGPAPPPAPGAGEAAGRPGSAGSQASAQGPLPSPSPPAAAAAAAGRGA
SVNSSSVQQSHGAAPGGGSSPAAPAPPQPAAPAQPVNNHVAAAAAAARDAGSPGPSPPAA
DGAPGAAGGGGAAGAAEGAAAAPAPRPGQAAPNGEGAGARAAAVPPVSGHGGAAAAQPQP
APGALPAVTALGASASPAPAPPAPGSAPPAPAAPAAPKPAVTAKAGAALPAAPQAVSPRP
ALGAAPRIVAPQLIVRPPPQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQA
QVQSQGQGPANMSPRLSVPTTGPVFRLSTAQQPTSVATSSVRLGLPVQAKVVPSTAAPAS
ATATLPGGAVLPHTTVSVGTTSAPNLFKTTVASGAAASQQAGAISGAQSQASGQPQGQPR
LPLPPHTAAQVPAQPLVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPET
SRNVKALVQDLLDAKIDPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRQSLLNSQHLVL
QGQPSQQSLQQTKLSQVIPQSASGSISSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKVV
QSNQSSQLQIIQSTSAQTVKRTPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGG
FGVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGINLNEESARILATNSDLVGAQIQSC
KDEPFLAAIPLHKRILETAKKLGITDVPAEVVTFISHATQSRLRTVIEKVTVITQHRMES
YKDDEWYEQATDVRAQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQK
AKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDAPGLLTIGGEGVGVCGGSQAGLGTAS
PRQYPRQKITRVNLRDFIFYMEQERDMSHSLLLYRALLK
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcgtcggacccactggaggagatgctgctcttctccgaggaggtggac
gagaaggcgctcagcgacctggtgggatccctggaatcgcagctggccggcggccgcggc
cccgccgagccgcccccgcccaggacctccgccccgtcccagcagccgcagcaggagagc
ctggcggggggcagcagccccggccggcagcagcacggcggccccgcgccccctcccgcg
cccggggcaggggaggcggcggggcgccccggcagcgcggggagccaagcctccgcccag
gggcctctcccgtccccgtctcccccggcggcggcggcagcggcggcggggaggggagcg
agtgtaaacagtagtagtgtgcagcaatcacatggagcggctcccggcggcggcagcagc
cccgccgctcccgccccgccgcagcccgccgcccctgcccagcctgtcaacaaccatgtg
gccgctgcagccgccgccgcgcgggacgcggggagccccggccccagcccgcccgccgcc
gacggcgcgcccggggccgcggggggcggcggagcggcgggagcggccgagggcgccgcc
gccgcccccgcgccgcgccccggccaggcggcgcccaacggggagggcgcgggggcccgg
gcggccgcggtgccgcccgtcagcgggcacggcggggccgccgccgcgcagccccagccc
gcgcccggcgcgctgcccgcggtcaccgcgctcggcgcctccgccagccccgcgcccgca
ccgccggccccgggctcggccccgccggcccccgcggcccccgccgcgcccaagcccgcg
gtcaccgccaaggcgggcgctgccctgcccgccgccccccaggccgtgtcgccgcggccg
gcgctgggcgccgctccccggatcgtggccccgcagctgatcgtgcggccgccgccgcag
accaccatccagctgccgcccggcttcaccatcccgcccgggatggtcctggtgcgcacg
gacgccggacagctcgtgatggtgccccagcaggctctggcacaggctcagatgcaggcc
caggtgcagtcacagggacagggtcctgccaacatgtcacccaggctttctgtgcccaca
actggccctgtttttcgcctgtcaacagctcagcagccaacgtccgtggccacctccagc
gtccgcctgggcctcccggtgcaagccaaggtggtgccatccacggcggcgcccgccagc
gccacggccacgctgccaggaggggctgtgctcccacacaccacggtatcagtaggtacg
acgagcgccccaaatctgttcaagacaacggtggcaagtggagctgcggcctcccagcag
gctggagccatcagcggtgcgcagagccaggcctcagggcagccccaagggcagcctcgg
ctgccgctgccccctcacacggcagcgcaggtgccggcacagcccctggtcattcccagc
tctcctgtgcctggaaccaccgttgtgtcccaggaaatgcaagagaatgtgaaaaaatgt
aaaaattttttagctacccttataaaacttgcttctcataattcaccatctccagaaacg
tcccgcaatgtgaaagctctggttcaagatttgttggatgcaaagattgatccagaagaa
tttacaagccgtcttcaaacagaactcaaatcatctcctcagccatatcttgtacctttc
cttaagaaaagtctacctgcactgagacaatctttactgaatagtcagcatttggttttg
caaggacagccgtctcagcagtcactccaacagaccaagctctcacaagttatacctcaa
tctgcctcgggaagcatttcctctgttgtcacgacgcagacaataggaataaggcaacca
aacaacatttgcacagtctctgtatcaaatacagtgcagcctcctcaggttaaggtggta
cagtcaaatcagagttctcaactgcagattatccagtcaacatctgctcaaactgtgaaa
cgaacccctgcttgccagactacccagattaggatgccagtggtaataactcagaccatt
agaccacaaggcacagtagggaaggcaccaacaatacaagccagtaaaagtcctgggggc
tttggtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccctggaggtggttct
ttcagagatgacgatgacatcaatgatgttgcctctatggctggcataaatcttaatgaa
gaaagtgcccgaattctggctaccaactctgacttggttggagctcagatccagtcctgt
aaagatgaaccctttcttgctgctatacctctccataaacgcatacttgaaacggctaaa
aaactaggaattactgatgtgccagctgaggtcgttacttttatttcccacgcaacacag
agcagattaaggacagtgatagagaaggtgacagtgataacccagcaccggatggagtcg
tacaaagatgatgagtggtatgaacaagccacagatgtccgagcacagctgaagttcttt
gagcagttggagcgtttggaaaagcaaaggaaagatgaacaagagagggagattttgctg
aaggctgccaagagtcgctcaaggcaagaagacccagagcaagctagactgaaacaaaaa
gcaaaggagatgcagcagcaggagcttgcccagatgaggcagagggatgccaacctgacg
gcgctggcagccatcggcccccgcaagaaacggaagctggatgcacctggcctgctcacc
ataggaggggagggcgtgggggtgtgcgggggcagccaggccgggctgggcacggcctcc
ccccggcagtacccccggcagaaaatcacacgagtcaacctcagggacttcatcttctac
atggaacaggagcgagacatgagccattccctcctgctctaccgagctctgcttaaataa
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