Vidua chalybeata (village indigobird): 128793511
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Entry
128793511 CDS
T11587
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04137
Mitophagy - animal
vcha04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128793511 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128793511 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcha04121
]
128793511 (AMFR)
Enzymes [BR:
vcha01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
128793511 (AMFR)
Ubiquitin system [BR:
vcha04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128793511 (AMFR)
Multi subunit type E3
ERAD complex
128793511 (AMFR)
LMBR1L-GP78-UBAC2 complex
128793511 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
Form-deh_trans
Motif
Other DBs
NCBI-GeneID:
128793511
NCBI-ProteinID:
XP_053808717
LinkDB
All DBs
Position
11:complement(13127768..13156164)
Genome browser
AA seq
631 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTALSALALLAAGLSAYRALSQAPGGAAGTESAETQRCAGPRAL
DVAYYLLSDSLCVWVLVNTACCFLMLVAKLIQYMVFGPLRVSERQHLKDKFWNFIFYKFI
FIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLALLI
AMLLSCCGLAVVCGVVGYTHGMHTLAFMAAESLLVTVRTAHVILRYVVHLWDLNHEGTWE
GKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRR
HKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQ
DTSCPTCRMSLNITDSHHVREDHQRENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIAS
WLPSFSVEVMHTTNILGIAQASNSQLNVMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTD
NILEGRIQVPFPTQRADSIRPALNNPVERHSADQEDTGTVTQTERVPLELNSRLEEMVEF
NEMEAEPNEAEDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYLNKTSDEELSTEKP
LPEGATADAVTLRRRTLAAAAERRLQMQQNS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgttcctggagcgcttcccctggcccagcctccgcacctacacggcactc
agcgccctggcgctgctggccgccggcctcagcgcctaccgcgccctcagccaggctccc
ggcggggcggcgggcaccgagtcggccgagactcagcgctgcgccggcccacgggccctg
gacgtcgcctactacctgctctccgacagcctctgcgtctgggtattagtgaacactgcc
tgctgttttctgatgctggttgctaagctaatccagtatatggtgtttggtcctcttcgt
gtcagtgagaggcagcatctcaaggataaattctggaatttcattttctacaagtttatc
ttcatttttggtgtgctgaatgttcagacagtggaagaagtagtgatgtggtgcctctgg
ttctctggacttgtgtttctccatctgatggttcagctctgcaaggatcgctttgaatat
ctttccttttctcctaccacacccatgagcagccacgtcagagtgctggccctgctcata
gccatgctcctgtcctgctgtggattagcagttgtctgtggagttgttggctacacccat
ggcatgcacacattggctttcatggcagcagagtctctgctggtgacagtcagaactgct
catgtgattttacgatatgtagttcatctctgggatctcaaccatgaaggaacgtgggaa
ggcaaaggcacttacgtctactacacagattttgtcatggagctaaccctgctttcccta
gacttgatgcatcatattcatatgctgctctttggcaatatctggttatccatggcgagc
ctggtgattttcatgcagctgcgctacctgttccatgaggtgcagcggcgaattcggcgg
cacaagaactacctgcgtgtggttggaaacatggaagccaggtttgcagttgcaacacca
gaggagctggcagtgaacaatgatgactgtgccatttgctgggactccatgcaatccgca
cgtaaactcccttgtggccacctcttccacaactcgtgcctgcggtcctggctggaacaa
gacacatcttgccccacctgcagaatgtctcttaatatcactgacagccatcacgtgagg
gaggatcaccagagggagaatctggatgagaacctggtgcctgtggcagcagcagaaggc
agacctcgcctgaaccagcacaatcacttcttccactttgacggctcccgaattgccagc
tggctgcccagtttttctgtggaagtgatgcacaccaccaacatcctcggaattgcacaa
gccagcaactcccagctcaatgttatggcccatcagattcaggagatgttccctcaggtt
ccttatcatttagttctgcaggatctgcagctaactcgttctgtagagatcaccactgac
aacatcctagaagggcgcatccaggtgcctttccccacacagcgtgcagatagcattaga
cctgcactgaacaaccctgtggaaaggcacagtgctgatcaggaggatactggaactgtc
acacagactgagagagtgccacttgaactgaactccagactggaagaaatggtggaattc
aatgaaatggaagcagaacctaatgaagcagaagattttgaggccaggggaagtcgcttt
tccaagtcagccgatgaaaggcagcgtatgttggttcagcggaaggaggacttgttgcaa
caagctcgaaagcgttacttaaacaaaacctccgatgaggagctgagcacagagaagcct
ttgcccgagggagcaacagcagacgccgtcaccctgcgccgcaggaccctcgctgccgcc
gccgaacggagacttcagatgcagcaaaactcttag
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