Vidua chalybeata (village indigobird): 128793596
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Entry
128793596 CDS
T11587
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128793596 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128793596 (NUP93)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128793596 (NUP93)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
RP854
Motif
Other DBs
NCBI-GeneID:
128793596
NCBI-ProteinID:
XP_053808889
UniProt:
A0A851KZ14
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All DBs
Position
11:13220195..13293275
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AA seq
819 aa
AA seq
DB search
MDTDGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRR
TFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENEPSYVGEVGPPGRSSMDS
VEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASD
ALKVRTNMEVRMEFVRHALHYLEESYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKD
RRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQ
VCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLF
RTERLRCHAVHVALVLFELKLLLKASGQSAQLLSHEAGDPPGVRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDK
FTSDTKSIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNK
ERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLV
PLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMED
RDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacacggatggctttggagagctgctgcagcaggcagagcagctggcagccgagaca
gaggggatctcggagctcccgcacgtggagcgcaacctgcaggagatccagcaggccggg
gagcgcctgcgctcccgcaccctgacccgcacctcccaggagactgccgatgtgaaggca
tcggttcttcttgggtctagagggcttgatatatcccacatttctcagagacttgagagt
ctaagtgcagccactacatttgaacctcttgaacctgtgaaggacactgacatccaggga
ttcctgaagaatgaaaaagataatgcgttgctgtctgccattgaagagtctaggaggagg
acttttgccatggctgaggagtatcaccgagaatcaatgctggttgaatgggagcaggtg
aaacaaaggattcttcattctctgcttgcatcaggggaagatgctcttgatttcacacag
gaaaatgagcccagctatgttggtgaggtgggtcctccaggtcgcagctccatggacagt
gtggagatggcatatgctcgtcagatttatatttataatgagaagatagtgaatggacat
ctgcagcctaacctggtggacctctgtgctgctactgcaggcctggatgataagaacatc
tccgagatgtgggccatggtaaaacaaatgaccgacgtcaccctggttcctgccagcgat
gccctgaaggtccggaccaacatggaggtgcgcatggagttcgtgaggcacgctctgcac
tacctggaggaaagttacaaaaattacacttttgtgacagtctttggaaacttgcaccag
gctcagctgggtggagtcccaggcacctaccagctggtccgcagcttcctgaacatcaaa
ctcccggcgtctgtccctggcctgcaggatggtgaggtggagggccatcctgtgtgggca
ctgatttactactgcatgcgctgtggagatctgactgcagccatgcacgtggtgaaacgg
gcacagcaccagctgggagagttcaaaacctggttccaggagtacatgcacagtaaagac
agaagactgtctcctgccacagaaaataaacttcgtcttcattacagacgagctctgaga
aataacactgacccctacaaaagggctgtttattgtattattggccgttgtgacattaca
gacaaccagagtgaagttgctgataaaacagaagattatctttggctaaaattgaaccaa
gtgtgttttgatgatggtggcgcgagctccccgcaggaccggctaacgttatcacagttc
cagaagcagctgctggaagactatggtgaatcacattttgcagtgaaccagccaccgttc
ctctacttccaagtgttgttcttgacagcacagtttgaagctgcaattgcttttcttttc
cggacagagcgcttgcgctgccacgctgttcatgttgctttggtcctgtttgagttaaaa
ttgctcctgaaagcatctgggcagagtgcacagctattaagccatgaagctggtgaccct
cctggtgtcagacgtttaaattttgtgcggcttctgatgctttacacccgtaagtttgaa
tcaacagatccaagggaagctctgcagtacttttattttctcaggaacgagaaggacagc
caaggagagaatatgttcttgcgttgcgttagtgaaatagtaattgaaagcagagagttt
gatatgattcttggaaagctggaaaaggatggtagtaggaagcctggcgtgatagacaag
tttacaagtgacacaaaatccattattaacaaagtggcttctgcagcagaaaataaagga
ttgtttgaagaagctgcaaaactctatgaccttgcaaagaaccctgacaaagttttagaa
ctgatgaacaagctccttagtccagttgttccccagatcagcactccccagtcaaacaag
gagcgtttgaagaacatggcccattccattgctgagaggtacaaagcgcaggggataagt
gcaaagaaatccattgactccacgttctaccttctgctagacttaatcacattttttgat
gaatatcacgctggtcacgttgacagggcctttgatattattgagcgcctgaagcttgta
cctcttagccaagattgtgtcaaggagagagtcgctgccttccggaatttcagcgatgaa
atcaaacacaatttatctgaagtcctgcttgcaaccatgaatattttattcaccaagtat
aagaggatgaaaggcacaagcccaaccacacctgccagaccccagcgggtaatggaagac
agagactcgcaactccagtctcaagctcgggcactgataatgtttgctgggatgatccca
tacagaacatcaggagacacaaacgcaagactggtgcaaatggagatccttatgaattag
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