KEGG   Vidua chalybeata (village indigobird): 128794019
Entry
128794019         CDS       T11587                                 
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
vcha  Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:vcha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcha03009]
    128794019 (RRP9)
Ribosome biogenesis [BR:vcha03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    128794019 (RRP9)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_EML WDR55 WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st CFAP251_N ASA1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR41 DSE1_N WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IP5PC_F Beta-prop_NOL10_N Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_VPS8 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_HPS5 PAC11 Beta-prop_SPT8 Beta-prop_WDR19_1st WDR54 Beta-prop_RIG_2nd Beta-prop_ACSF4 WD40_RFWD3 Troponin Beta-prop_Nup120_160 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 128794019
NCBI-ProteinID: XP_053809547
LinkDB
Position
12:complement(14438518..14443374)
AA seq 566 aa
MSIFTPSLPPQGVIHCVGALPPCPSSRDGAYRGHHQEDDEAEGAGQLLHLHDQDTDEAKA
GFPNWPAFWALQFGPFRCVPAPGADGRARATAGRPADEEVSSDSETESPLLGRRRREAAE
EEVEETPQEKKLRLAKQYLEELRQLEEERAEEEEELEPVDLIGDRLKEDVLEQRGRLQRL
VAKDVQSPDPARIRVLRGHQLPVTCLVISPDDRFIFSASKDGSLIKWEVDSGKRLCVVPG
GKKGTEEQHMGHASQVLCMAISSDGKYLATGDRNKLIMIWDAATCKRLHIFRGHRDAVSG
LSFRKGTHQLYSASHDRCVKVWDVAENAYVETLFGHQDIITGLDSLSRECCVTAGGRDGT
VRLWKIPEESQLVFSGHQGSIDCIQLINEEHMVSGADDGSLALWGLTKKKPLALARQAHG
EQDVQGLQQPYWISAVAALRNSDLLATGSHSGSVKLWKCGEGFRKVEHLLDIPLVGFVNS
LKFSAAGDFLVAGIGQEHRLGRWWRIKEAKNSICIIPLKQKTTASSPESPGCPWTATVPG
ATGAGHSVPVAVPPILDAATTVVSRM
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgtccatcttcacaccctctcttcctccccagggagtgatacactgtgtgggagctctc
cctccgtgtccatcaagtcgtgatggggcttacagagggcaccaccaagaagatgatgaa
gcagaaggtgcaggacagctccttcacttgcacgaccaggacacagatgaggccaaggca
ggatttccaaactggccagccttttgggccctgcagtttggacccttcagatgtgtcccc
gcaccgggcgccgatgggagagcgcgggcgacggccggtcggcccgccgacgaggaagtg
tctagcgactctgagacagagagcccgttgctggggcggcggcggcgagaggcagcggag
gaggaggtggaggagacgccgcaggagaagaagctgcgcttggccaagcagtacctggag
gagctccgccagctcgaggaggagcgggcggaggaggaggaggaactcgagccggtggat
ctcatcggcgaccggctgaaggaggacgtgttggagcagagaggccggctacagcgcctg
gtcgccaaagatgtacagtctccagatccagccaggatccgtgtgctgcggggacaccag
ctgcctgttacctgcctcgtcatctctcctgatgacagattcattttttctgcttccaag
gacggctccctcatcaaatgggaggtggacagtgggaagaggctgtgcgtggtgcccggg
gggaagaagggcacggaggagcagcacatggggcacgcatcccaagtcctctgcatggcc
atttcatcggacggcaagtacctggctacgggagacaggaacaagctgatcatgatctgg
gatgcagccacctgcaagcgcctgcacatcttcagagggcaccgcgacgctgtctcgggc
ctgtccttccgaaagggcacacaccagctgtacagcgcttcccacgaccgctgcgtcaag
gtctgggatgtggctgagaacgcatacgtggagaccctgttcggacaccaggacatcatc
actgggctggacagcctgagccgggagtgctgtgtgacagcggggggacgggatggcacc
gtgcggctctggaagatccctgaggaatcacagctcgtcttttctgggcaccagggctcc
atcgactgtatccagctcatcaacgaggagcacatggtgtctggtgctgatgatgggtct
ttagccctgtgggggctgacgaagaagaagccgctggcgctggctcggcaggcgcacgga
gagcaggacgtgcagggcctgcagcagccctactggatctcagccgtggctgccctgcgc
aacagtgacctcctggccacaggatcccacagcggcagtgtgaagctctggaagtgtggt
gaaggatttcggaaggtggagcacctcttggacatccccttggtgggttttgtcaacagc
ctcaagttctcagcagctggtgacttcctggtggctggcatcgggcaggagcaccggctg
ggacggtggtggagaatcaaagaagccaaaaacagtatctgcatcatccccctgaagcag
aagaccacagcctccagccctgaatcccctggctgtccctggacagccactgtccctgga
gccactggagcaggtcattctgtccctgtagctgtgcctcccatccttgatgcagccacc
actgtggtcagcaggatgtga

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