Vidua chalybeata (village indigobird): 128794237
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Entry
128794237 CDS
T11587
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcha03036
]
128794237 (POC1A)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcha03037
]
128794237 (POC1A)
Chromosome and associated proteins [BR:
vcha03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
128794237 (POC1A)
Cilium and associated proteins [BR:
vcha03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128794237 (POC1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_IFT140_1st
DSE1_N
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR41
eIF2A
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Vps41
PAC11
Beta-prop_IP5PC_F
Beta-prop_DCAF12
TRM82_WD
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Ge1_WD40
Tricorn_2nd
Beta-prop_VPS8
Cytochrom_D1
Beta-prop_ACSF4
Beta-prop_Nup120_160
PROPPIN
Nucleoporin_N
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
128794237
NCBI-ProteinID:
XP_053809943
LinkDB
All DBs
Position
12:14847475..14901309
Genome browser
AA seq
405 aa
AA seq
DB search
MAALCEEDPSLERHFKGHRDAVTSVDFSRAKKQLVSGSMDSCLMIWNMKPQMRAYRFLGH
KDAVLCVQFSPSGHLVASGSRDKTVRLWIPSVKGESTVFKAHTATVRSVHFSSDGQSLVT
ASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIVSSSDDKTVKLWDKTSRECI
HSFCEHGGFVNHVDFHPSGNCIAAGGTDNTVKLWDVRMNRLLQHYQVHNSVVNSLSFHPS
GNYLVTASSDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRDGELFASGGSDEQVMVWKT
NFDADYGDVVKPQKYSSSVDGTHGTGQSEMDCGIHNKKTKTQDSVRTHEQQEEETSLANT
LEHIVGQLDVLTQTVSILEQRLTLTEDKLKECLETQQKIIQNKTN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctgtgcgaggaagatccatccctggagaggcacttcaaaggccacagagat
gctgtcactagcgtggacttcagtcgtgctaagaaacaattggtaagtggctcaatggat
tcgtgcctgatgatctggaatatgaagcctcagatgagagcctatcgcttcttgggccac
aaagatgcagttttgtgtgtccagttctcaccttctggtcaccttgtggcttcaggctct
agagacaaaacagtccgtttgtggatccctagtgtcaaaggagaatcgactgtgttcaag
gctcatacagcaactgtgagaagcgttcatttctccagcgatggccagtccttagttaca
gcttctgatgacaaaacaatcaaagtgtggacggttcacaggcagaagtttctgttctca
ctgagtcagcacatcaactgggttcgctgtgccagattctctcctgatggacgattgata
gtgtcatccagtgatgataaaactgtcaagctgtgggacaaaaccagcagagaatgcatc
cactccttctgtgagcatggagggtttgtgaaccacgtggatttccatcccagcggtaac
tgcattgccgcgggcggtacggacaacacggtgaagctgtgggatgtcaggatgaacaga
ctgcttcaacattaccaagtgcacaactctgtggtcaacagtctttcctttcatccctct
ggaaactatctggttactgcttccagtgattcaactcttaagattctggacttgttagaa
ggaagacttctctatactctacatggtcaccagggtccagctacctgtgtagcattttca
agagatggagaattatttgcttctggaggttctgatgaacaggtgatggtgtggaagact
aactttgatgctgattatggtgatgtagtgaaaccccagaagtatagcagcagtgtggat
gggacccatggcactgggcagtcagaaatggattgtggcattcataataagaaaacaaaa
actcaggattctgttaggacccatgagcagcaagaggaggagaccagtcttgcaaatacc
ctggagcatattgtgggacagctggatgttctgactcagacagtttccatcctggagcag
aggctgacactcactgaggacaagctgaaggaatgtcttgagactcagcagaaaatcatt
cagaacaaaacgaactga
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