Vidua chalybeata (village indigobird): 128794275
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Entry
128794275 CDS
T11587
Name
(RefSeq) cadherin-12 isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128794275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vcha04515
]
128794275
Cell adhesion molecules [BR:
vcha04515
]
Cadherins
Major cadherins
128794275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_2
Stevor
ASFV_J13L
RIFIN
YxzE
DUF443
Motif
Other DBs
NCBI-GeneID:
128794275
NCBI-ProteinID:
XP_053810000
LinkDB
All DBs
Position
1:76150727..76304208
Genome browser
AA seq
793 aa
AA seq
DB search
MLTRNCLSLLLWVLFDGGLLTPLHPQAQEILEAQPRENVVPVPGRRSSAQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGVGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDVDTKKPLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPETSHIGTAIGRIRAVDPDFGK
NAEIEYNIVPGDGGNLFDITTDEYTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SVGPFKDTATVKINVLDMDEPPVFSKPMYTMEVYEDTPVGTIIGAVTAQDLDAGSSSVRY
FMDWKNDVDSYFTIDATEGTIATNQLLDRESTAQYNFSIIASKVSNPLLTSKVNVIINVL
DVNEFPPEISVPYETSVCENAKPGQVIQTITAADKDLSPAGQRFSFKLSSEASNKPNFTV
HDYRNNTAGIETRRNGYSRRQQELYFLPVVIEDSSYPVQSSTNTLTIRVCRCDSDGTIQS
CNVEAIFLPVGLSTGALIAILLCIVILLVIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEDNKIRRDIKPDTLRFTRHRPPAEDNTDIRDFINQR
LQENDVDPSAPPYDSLATYAYEGNGSVAESLSSIDSLTTEADQDYDYLSDWGPRFKILAD
MFGEESYNPDKVT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaaggaactgcttatccctgcttctctgggtcctgttcgatggaggtctccta
acaccactgcatccacaagcacaagagatcttagaagcacagccaagagaaaatgttgtc
ccagtgccagggaggagatcatctgcccagcgagtcaaacgaggctgggtgtggaatcaa
ttttttgtgctggaggagtacatgggctctgaacctcagtatgtgggaaagcttcactct
gacttggacaagggagttggcactgttaaatataccctttcaggagatggtgctggcacg
gtttttaccattgatgagaccacaggagacatccatgccataaggagcctagatcgagaa
gaaaaacctttctacacactccgggctcaggctgtggatgttgacaccaagaaaccacta
gagcctgaatcagagttcatcatcaaagtgcaggacattaatgataatgagccaaagttt
ctggatgggccttatattgccagtgtcccagaaatgtctccagtgggagcatacgtgctt
caagttaaggcgacagatgccgacgatcccacttatggaaacagtgctagagtggtttac
agcattcttcaggggcaaccatatttctccattgatcccaagacaggtgtaataagaaca
gctttgccaaatatggacagagaagtgaaagaacaatatcaagttctaatccaagccaag
gacatgggaggacagctgggaggactagctggtactaccactgtaaacattactctcacg
gatgtcaacgacaacccacccagatttcctaagagtatcttccatttaaaagtacctgag
acctctcacattggtactgctattggacggatcagagctgtggaccctgattttgggaaa
aatgcagaaattgagtacaacatagttccaggagatggaggaaacttgtttgacatcacg
acagatgagtacacccaggaaggagtcattaaactgaaaaagccattagactttgaaaca
aagaaggcatacacctttaaggtggaggcctccaatctccatcttgaccatcgatttcac
tcagtgggtccattcaaagatactgccactgtgaagataaatgtgttggacatggatgaa
cctccagtgttcagcaagcccatgtacacaatggaagtctatgaggatacaccagtgggg
accattataggtgcagtgacagcacaagacctcgatgctggcagcagctcagttagatac
ttcatggattggaagaatgatgtggacagttactttacaatagacgctactgaaggaacc
attgctacgaatcaattactggacagagaaagcacagcacaatacaatttctctataatt
gcaagtaaagttagtaacccattattaaccagcaaagtcaatgttataataaatgttttg
gatgtcaacgagtttcctcctgaaatttcagttccatatgagacatctgtatgtgaaaat
gccaagccaggacaggtgatacagaccatcactgcagcagataaagatttgtcaccagct
gggcaaaggttttccttcaaactgtcatctgaggcttccaacaaaccaaacttcacagtc
catgactacagaaacaacacagctgggattgaaaccaggagaaatggctacagcagaagg
cagcaagagctgtactttcttccagtagtaattgaagacagcagttaccctgtccagagc
agcacaaacactttgactatccgtgtttgcagatgtgattctgatggcaccatccagtcc
tgcaacgtggaagcaatcttcttaccagttggcctcagcacaggagctttgattgcaatc
ttgttgtgcattgttatacttctagtcattgtggtactgtatgtagcactacggaggcag
aagaaaaaagacaccctgatgacctctaaagaagacatcagagataatgttatccattat
gatgatgaaggaggtggagaagaggacacccaggcttttgacataggtgccctgaggaat
cccaaagtgattgaagataataaaatacgcagggacataaaaccagacaccttgcgtttt
acacgccacagaccaccagcggaagataacacagacataagagatttcattaatcaaagg
ctgcaggaaaatgatgtagatccatctgcacccccttatgactccttggcgacctatgcg
tatgaaggaaacggatctgttgcagagtctctgagttctatagactccctaactacagag
gcagatcaggattatgactatctgagtgactggggacctcgctttaagatcttggcagat
atgtttggagaagaaagttataaccctgacaaagtcacttaa
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