Vidua chalybeata (village indigobird): 128794836
Help
Entry
128794836 CDS
T11587
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128794836 (TMC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcha02000
]
128794836 (TMC3)
03037 Cilium and associated proteins [BR:
vcha03037
]
128794836 (TMC3)
Transporters [BR:
vcha02000
]
Other transporters
Pores ion channels [TC:
1
]
128794836 (TMC3)
Cilium and associated proteins [BR:
vcha03037
]
Other cilia and associated proteins
Stereociliary proteins
128794836 (TMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Orf78
TMEM43
Motif
Other DBs
NCBI-GeneID:
128794836
NCBI-ProteinID:
XP_053811029
LinkDB
All DBs
Position
13:12074162..12095138
Genome browser
AA seq
1113 aa
AA seq
DB search
MAAAQGSPALRAAKSCKKQRTVKRQTGIYTYQEPPHSNSDDDTGEEKAESHDPEQIFQNI
QYQKEIMSNIRCRPWPMRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWKKFIRLAY
NFVVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGAPF
GSTVSKTIPKEHIASAQDLDTIWSLGGYLQYSVLFYGYYGRDRKIGKAGYRLPLAYFLVG
MAVFAYSFIILLKKMAKNSRMSLASASDENYTFCWRLFCAWDYLIGNPEAAESKAAAIVN
SIREAILEEQEKKKSKNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQRLERTKKEL
TLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVDSMSVTDSDVNTNASNSTISSASNTLSKDDNLTIPNVQIKRNGFVTLEEHRTQGLT
DSLVNQTISFNTQNPQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLCVRYLSDC
WCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAV
LTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQEKIYDI
VSETIQNDFPTWFNTVITYISSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQLRMKIQT
ERTEDKKKVVQMAVARIQNLDANDKRPEQETDIISQESSARSSTPRKNGSVLNFESPVSK
GTRIQTISQSVPQAVPTTDVVRPVNTTPTTLTSLTPAPSVSSVQKPRNDHITNRYPSVVH
RSASELCKTKPYTPVTFKKHTEDVHSDPLFRKAIRQVNSDALGARAPVFLGCRPYATRYF
LVNENESRKKSLRSTSRLQRHFRKEESRDIIELYPRHVRRYVVRTPHQMYSPHPSEEEED
EEELEKEFMNGSHRPRSLSDLRPGSRFYIGDRADGHILMSKDLGRVHYKSWDDGFELDLD
RPPYAYKKVHLNYPEPRVKPKSKQKLEQSLTESDSISIESSSDPQNSSNDQYIQVIHTKD
KYPKTGAKLTKKKSKNSVDLSMSEPSELVCSNV
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcacagggctcccctgcgctcagagctgccaagtcctgcaagaagcagcgc
acggtgaagcggcagactggcatctacacctaccaggagcctccccacagcaattcagat
gacgacactggtgaagagaaggctgagagccatgacccagagcagatctttcagaacatc
cagtaccagaaggagattatgtccaacatccgctgccggccgtggccgatgaggcagaag
ctgagggcgctcaggcaggcgaaggagatcgtgctgaagtacgaagggaggctcacgaga
accagaggttaccaggctgctggggcagagctctggaagaagtttattcgacttgcatac
aattttgtggtaatctttattccttgggaaatgagaataaagaaaattgagagtcatttt
gggtctggagttgcctcttacttcatcttcctgagatggctgtttggaatcaatatcgtc
cttaccataatgacaggagcatttgtagtcctaccagagctcctggctggggccccgttt
ggcagcacagtcagcaagaccattcccaaggagcacattgcatctgctcaagacctggac
accatctggtccctagggggctacctccagtactctgttctgttttatggctattatggt
cgggacaggaaaattgggaaagctggataccggctgcctcttgcctacttccttgttgga
atggctgtgtttgcttacagcttcatcattcttctaaaaaaaatggcaaagaactcaaga
atgagtttagcaagtgcctctgatgaaaattacactttctgctggagactgttctgtgct
tgggactatttgataggaaaccctgaggctgcagagagcaaagctgctgccatagtcaac
agcatcagggaagctatattggaagaacaggaaaagaagaaaagcaaaaacttggcagtg
accataagcttaagaattattgcaaacatccttgtgcttctgtcccttgcgggaagtatt
tacatcatctactttgttgtggatcgatcccaaaggttagagcgcaccaaaaaggaattg
actctttgggaaaaaaatgaggtcagtgtagttgtgtcactgatcacaatgattgcaccc
tctgcttttgaacttgtggcagctctggagatgtatcatccaaggaccactcttcgcttc
cagcttgccagggttcttgtcctatacctgggaaacctctacagtttaatcattgccctc
ctggataaagtggacagtatgagtgtcactgactctgatgtgaacaccaatgcaagtaat
tccaccatctcctcagcaagcaacactctttctaaggatgacaatttaaccatccctaat
gtacaaattaagagaaatggctttgtcacattggaagagcatcgcacccaaggcctgaca
gactcactggttaaccaaacaatttcctttaacacccagaacccacaggatcagtgctgg
gagacatatgttggtcaagagatgctcaagctttcaattatcgacatgattttcacagtt
gcaagcatcctgctaattgattttttccgtggactgtgtgtccggtatttgagtgattgc
tggtgctgggatctagaaagcaagtttccagaatacggagaattcaaaattgcagagaat
gtattgcatttggtctacaaccaaggaatgatctggatgggagctttcttttcaccttgc
ttaccagcattcaatgtactcaagttgattggactcatgtacctgaggagctgggctgtg
ctgacgtgcaatgtaccacaccagcaggttttcagagcatctcgatccaataatttctac
ttggccatgttgctgtttatgctgttcttgtgcatgttaccaacaatttttgctattgcc
cgatataagccatccttaagctgcggccccttcagtggtcaagaaaaaatatatgatatt
gtttctgaaacgattcaaaatgattttcccacatggttcaacacagtgattacttacatc
agcagtcctgtggttgtcctccctgcactactactgttattcatgctaatctactaccta
caaagtattgcaagatcattaaaattcaccaacaatcaactgagaatgaagatacaaacg
gaaagaactgaagataagaaaaaggtggttcagatggcagtagccagaatccaaaatctg
gatgctaatgacaaaagaccagagcaagaaacagatattatcagccaggagtcttctgct
cggtcctcaacaccccgaaagaatggcagtgtcttgaactttgaatctcccgtgagcaaa
ggcaccagaatacaaaccatttcccagtctgtgccccaagctgtgccaacaactgatgtt
gtgagacctgtcaatacaactcccacaactttgacctctttaacaccagctccctctgtg
tcaagtgtacagaaaccaagaaatgatcatatcacaaacagatacccaagtgttgttcat
aggagtgcaagtgagctgtgcaaaacaaagccctacacaccagtgactttcaaaaagcac
actgaagatgttcattctgaccctctcttcagaaaagccattcgacaggtaaattcggat
gcccttggggcacgggctcctgtatttttgggatgtagaccatatgccaccaggtatttt
ttggttaatgaaaacgagtcccgcaaaaaatcgctccgttctacgtcccgactccaaagg
catttcagaaaggaggaatcgcgagacattattgagttgtatccacgccacgtcagaaga
tacgtggtccgaacaccacaccagatgtattcccctcatcccagtgaagaggaggaggac
gaagaagaacttgagaaagaattcatgaacggatcccatcgccctcgctcactgtctgac
cttcgcccaggatcacggttttacattggggatcgtgctgatggccacattctaatgagc
aaagatctaggcagagtgcattacaaatcctgggatgatggttttgagctggacctggac
aggcctccatatgcttacaagaaagtacacctgaactatcctgagccacgtgtgaaacca
aaatcaaagcaaaagctggagcaatctctaacagagtctgattccatttccattgaatcc
agcagtgatccgcagaacagcagcaatgaccagtacatccaggtcattcataccaaggac
aagtacccaaaaactggggcaaaactcaccaaaaagaaatctaaaaacagtgtggatcta
agtatgtctgagcctagtgaactggtgtgctcaaatgtctga
DBGET
integrated database retrieval system
