Vidua chalybeata (village indigobird): 128795027
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Entry
128795027 CDS
T11587
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcha03037
]
128795027 (NPHP3)
Cilium and associated proteins [BR:
vcha03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
128795027 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
NPHP3_hel
TPR_10
TPR_12
NPHP3
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
NPHP3_N
TPR_11
NACHT
AAA_16
AAA_22
KAP_NTPase
DUF2225
14-3-3
AAA_19
T2SSE
Viral_helicase1
PH_met_RdRP
IPGA1_CC
Motif
Other DBs
NCBI-GeneID:
128795027
NCBI-ProteinID:
XP_053811409
LinkDB
All DBs
Position
1:complement(43627004..43659899)
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AA seq
1322 aa
AA seq
DB search
MGTASSLVSPAGAVGEVIEDTYGGGGGEACEIPVEVKPKARLLRGSLRRVGGSRPGGLIG
ASFKSTASVQELECVAEYERLRKEYEIFRVSKNNEVASMVKKEAKLDRENKRLRAELQAL
QKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKREL
EAKLQRLQAQGIQVFDPEESDSDDNCTDVTATGAQSEYWNGGVLGSEPSMGSMMQLQQSF
RGPEFAHSSIDVEGPFANINRDDWDAAVASLLQVTPLFSHSLWSNTVRCYIISTDETQPE
VTVFIRNYSPKLQRVCETMGYFFQVVNFSTENERPLQDVRKWEIEKSSLVILLLHLTLPS
CLLEDCEEAFLRNPEEKPRLIYHRREDGKVSSVSVQQLIEQISCMNKAKMIHHVGGMEEG
AYEIYNCVEKIIKQDILGCEMTDLEGKDLGNKEDSTAPEEEVFGDVLWDAHDEQEQMEAF
QQASNSTCELGFEKYFERLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHSPNT
LILYHFVGRPMSTSSESALIIKRLTLKLMQHSWLVSPLTFDPAKLLEEFPRWLEKLSARH
QGSIIIIIDSIDQIQQAEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLNS
KDVKSLISAECNSANVKLTKEQEKKLERHCRSATTCNALYVTLLGKTIACVGNTGNIDEI
LQQCCQCQDTVSLYRLVLRSIQESLQSDKEKDLLREILCVIGVSHNGVSESELMELYPEL
TSAVLASLLHSLHKMCLLTYGCGLLKFQHLQAWEMVKLEYMEAGENVISAYRQRLVEYFT
MQLSQDRVTWRSADELPWLFQQQGDKQKLHKCLLNLFVSQNLYKRGHFAELLSYWQLVGK
DKSSMAAEYFDSLKEYEKSSEGEESMICLADLYETLGRFLKDLGLLSQAVAPLQRSLEIR
ETALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENAYGAEHPRVARELDAL
ATLYQKQNKYEQAEQLRKKSFKIRQKAARQKGSLCGFALLRQRALQLEELTLGKDTSDNA
RTLNELGVLYYLQNNLETAELFLKRSLEMRERVLGSDHPDCAQSLNNLAALYNEKKHYDK
AEELYEKALDIRRRALAPDHPSLAYTVKHLAVLYKKTGKLDKAVPLYELAVEIRQKSFGP
KHPSVATALVNLAVLYCQMKKQIEALPLYERALKIYEDSFGQMHPRVGETLKNLAVLSYE
RGDFEKAAELYKRAMEIKEAETLLIGGKATSRHSSSGDTFSLKSALSPNALLEHGQSNPF
AA
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgggcacggcgtcgtccctggtgagcccggcgggcgcggtcggggaagtgatcgaggac
acgtacggcggcggcggcggcgaggcctgcgagatcccggtggaggtgaagcccaaggcg
cggctgctgcgcgggtccctgcggcgcgtcggcggctcccggcccggcggtctcatcggg
gccagcttcaagtcgacggcctcggtgcaggagctggagtgcgtggccgagtacgagcgc
ctgaggaaagagtacgagatcttccgcgtcagcaagaacaacgaggtggcctccatggtg
aagaaggaggccaagctggacagggagaacaagcggctgcgcgccgagctgcaggcactt
cagaaaacataccagaaaatacttagagagaaagaaagtgcattagaagctaaataccaa
gccatggagagagctgctacttttgaacatgatcgagacaaggtcaaaaggcaattcaag
atttttagagaaactaaggaaaatgagattcaggacttactgagggccaaacgagagcta
gaagcaaaactccagagactgcaggcccagggaatccaagtgtttgatcctgaagagtct
gattctgatgataattgtacagatgttacagctacaggggcacaatctgaatactggaat
ggaggagtgttgggaagtgagccatccatgggtagtatgatgcaacttcagcagtctttc
agagggcctgaatttgctcatagctccatagatgttgagggaccatttgcaaatataaac
agagatgattgggatgctgctgttgccagtttattgcaggttactcctctgttttcccac
tctctgtggagtaacacagtaagatgttatattatcagtactgatgagactcagccagaa
gtgaccgtcttcattcgaaactactccccaaaacttcagagagtctgtgaaacaatggga
tacttctttcaagttgttaatttttcaacagagaatgaaaggcctcttcaggatgtaaga
aaatgggaaattgaaaaaagttcattagtcattttgctcttgcatttaactttgccaagt
tgtttgttggaggactgtgaagaagccttcttgagaaatccagaagaaaagccccggtta
atttaccacagaagggaggatggcaaagtcagttcagtctcagtgcaacagttaattgag
caaatttcttgcatgaacaaagcaaagatgattcaccatgttggaggaatggaggaagga
gcatatgaaatctataattgtgtagaaaaaataattaaacaggatatattgggatgtgaa
atgacagacctagaaggaaaggatttgggtaataaggaagactccactgctcctgaagaa
gaagtttttggtgatgtattgtgggatgcacacgatgaacaagaacagatggaagctttt
cagcaggcctctaattcaacatgtgagctgggatttgagaaatattttgaacgtctgaat
gacctagtagcagcaccagcaccaattccaccactgcttgtatcaggaggaccaggctct
gggaaatctctccttctgtcaaaatggattcaattacagcagaagcattcaccaaacact
ctaattctttaccactttgttgggaggcccatgtctaccagttcagaatctgcattgata
attaagcgccttactctgaagcttatgcaacactcttggttagtatcacctctgactttc
gatccagctaaacttctggaagagtttccccgttggctggaaaaactttctgcacgccat
caaggcagcattattataattattgactctattgaccaaatacagcaagctgagaagcac
atgaagtggttgatagatccactgccagtgaacgtgagagtgattgtatcagtgaatgta
gaaacatgtccgcaggcatggaggttatggcccactcttcatcttgatccactgaattcc
aaagatgttaaatctctcattagtgcagaatgtaactctgcaaatgttaaattgactaaa
gaacaggagaagaagcttgagagacattgtcgttccgccacaacttgcaatgctttgtat
gtcactctcttgggcaaaaccattgcttgtgttggaaatacaggaaatattgatgagatt
cttcagcagtgttgccagtgtcaagacacagtgtcactgtacaggcttgttctgagatca
attcaggaatcattgcagagtgataaagagaaagaccttttgagagagatactgtgtgtc
attggtgtcagccacaatggggtgagtgagtcagagctgatggagctttatcctgagctg
acttctgcagtgctggcctcactccttcatagcctgcacaaaatgtgtctgctgacatat
ggctgtggtttgctgaagttccagcacctccaggcttgggagatggtaaaactagagtat
atggaagcaggtgaaaatgttatttctgcctatagacaaagactagttgaatatttcacc
atgcagttaagtcaagaccgagtgacttggagaagtgcagatgaacttccctggctcttc
caacagcagggagataagcaaaagctacacaagtgtcttttgaatctctttgtgtcccaa
aacctttacaaaaggggacattttgcagaattgctgagttactggcagctggttgggaaa
gataagagctctatggcagctgagtattttgactctctgaaagaatatgaaaaaagcagt
gagggagaggaaagtatgatctgcctggctgatctttatgagaccctgggacggtttctt
aaggacctaggtcttctcagtcaggctgtagctcctctgcagcgctctctggagattcga
gagaccgcgctggatccagaccaccccagggtggcacagtcactccaccagctggcagga
gtctatgttcagtggaagaagtttggaaatgctgaacagctgtacaaacaggcattggaa
atctctgaaaacgcctatggagctgaacaccctcgggtggcccgtgaacttgatgcactt
gcaaccttgtaccaaaagcagaacaaatatgaacaagctgagcaactgaggaaaaagtcc
ttcaaaatacgccaaaaagcagcaaggcagaaaggcagtctgtgtggctttgctctcctg
cgtcaaagagctctgcaactggaagagctcacgttaggcaaggatacgtcagataatgct
cgaaccctaaatgagcttggagttctctactacctgcagaataatcttgagacagcagag
cttttcctgaagcgctccttggaaatgcgggagcgagtcctgggatccgaccacccagac
tgcgcgcagtccctgaacaacctggcagccctgtacaatgagaagaagcactatgacaag
gctgaggagctctatgagaaagctttggacatcaggaggagagccttagctccagatcat
ccctccttggcttacactgtgaaacacctggcagtgctgtacaaaaagacgggcaaactt
gacaaggctgttcctctgtatgagctagcagttgaaattcgacagaagtcatttggccca
aaacatccaagtgtagcaactgctctggtaaacctggctgtcctttactgtcagatgaaa
aagcagattgaagctttgcctctctatgaacgtgcactaaagatttatgaagacagcttt
ggtcaaatgcatcctcgcgtgggggaaacactgaaaaacttggctgtgctaagctatgaa
aggggagactttgagaaggcagctgaactttacaagagagctatggaaataaaagaagca
gagactttgttgataggtggaaaagcaacttcccgacactcatcaagtggagacacgttc
agcttaaaaagtgcattatcaccaaacgctttgctggaacatggacaaagtaatcctttt
gcagcatga
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