Vidua chalybeata (village indigobird): 128795457
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Entry
128795457 CDS
T11587
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128795457 (GEMIN5)
03041 Spliceosome [BR:
vcha03041
]
128795457 (GEMIN5)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128795457 (GEMIN5)
mRNA cycle factors
P-body specific factors
128795457 (GEMIN5)
Spliceosome [BR:
vcha03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
128795457 (GEMIN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
DSE1_N
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_Aladin
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
PAC11
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_WDR41
MIOS_WD40
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Nup120_160
ASA1
DNAI3_WD
Beta-prop_LRRK2
Beta-prop_VPS8
TPR_IF140-IFT172
WD_LRWD1
Beta-prop_IP5PC_F
Tricorn_2nd
Lgl_C
Motif
Other DBs
NCBI-GeneID:
128795457
NCBI-ProteinID:
XP_053812165
LinkDB
All DBs
Position
15:complement(13228408..13246037)
Genome browser
AA seq
1529 aa
AA seq
DB search
MGVRALPASPNWYSSRCSDASSDGRLFGFAARHRVCLLDVAGAAPAFYGELIGHTDRISG
FAFCHCPGQSSLCASSSDDGSVKIWDSGTLSAVLEYSLHQNAISALHWSPLVKDLIVSGD
EKGVIVCYWHNRSDSQQFFPEPRTVFCLTCSPHHENLVAIGYKDGMVVIIDISRKREVVH
RLRGHEDEIHCLAWCPVPGEERLPAWQDELQGAPSEEGKVPNGELTQDTATRKGCYLASG
SKDQTIRIWSCTRGRSVMTLKLPPTKRRGGAVDPAVKERIWLTVHWPAGHPSDLVSSGFG
GELLLWNLTQPGKRKWTLLGSSEGQNHSRIVFNLSSVKHQDRELLFSISMDRDVKCWDLS
TLDCSWTMPSLGGFVYSLAFSPVDTGCLAVGVGDSMIRVWNTLSINNIYDVKTFWQSIKS
KVTALSWHPTKEGSLAFGTDDGKVGIFDTLSSSAKNKPPQISSTYHKKTVYTLAWGPPTP
PLISGEENEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKLPARTEVS
WKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAIRWHHEHGTQPELSYLIASG
SINATIYVHNLKSVVENSSENPLTITEPFRTLAGHTAKITSLSWSPHHEGRLVSACYDGT
AEVWDVMKEEPLCNYRGHQGRLLSVQWSPVEPDCVYTGADDFSVHKWHISKQEHTRPPQG
KKSIELEKKRSIQPKVKAKKKKKPVGKSPGKQDANDAMNGDDSMKEMLLEENGVSDHEGE
KEAQEAELADKVSVTVSRDTSSSACDYSSFSLPKPFVTQKAVPVKKDPPKEKPTPDASLK
KRKPRSILPFSTLMDHRSKEELHQDCLRLAACLKTKDNNEDVSPDLKDCIHLGLFTDRDS
LHKMIDMEGKQHLENGHAELFQQLMLWKGDMKGVLQAAAERGELTDQLVAMSPMVGYQAW
VWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAIELLKVNNFYREAIVMAKARLRPEDPV
LKDLYSSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLSKKGDVASLKTAAELALISGEE
ELSATLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVFCLNELLCSCLSERNPSERKS
PVPPCYHSWELNREAPFFDMVTEVWQNVLGMDTSEKATCAQEQLRRIEHPPSTSNTHPKQ
VLFHISHDLALAALSCHLGTWDEAVKSILGAVTRSFDAGNFTLMQEICSIILPEGCDDLR
DKLDSTNSQSMDACRSLEGFVAYRLLYDLWWNPPKDSLGLQKAVLGAVPCPSEQTALEES
CISGDPSPEETVQTAAEMGENLCSTTEVPKSETQSDSRTDPVDVADRQSKLKGCQVLLSE
EMAALQNTQRDIAEVQETLAEMIRQHQQQRNNLQENTNGNTQGSNLKQSSETESDKPCSD
SNQMNGKDEAKQPVTLPELTKQLLKAKQKLAEFPDNLKVFPFPDVLECCLVLLHLGSQCP
PGLQEEALALLRKHGGAGVYKKAGRSFLT
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgcgggcgctgcccgcctcccccaactggtacagcagccgctgcagcgatgct
agcagcgacggccgcctcttcggcttcgcggcgaggcaccgcgtctgcctgctggatgtc
gccggcgccgcgcccgcgttttacggggagctcatcgggcacacggacaggatctccggc
ttcgccttttgccactgccccgggcagagcagcctctgcgccagcagctcggatgacgga
agcgtcaaaatctgggacagcgggacactgtcggcggtgctggaatacagcctgcaccag
aacgccatctcagcactgcactggtcccctcttgtgaaagatctgattgtgtctggtgat
gagaaaggtgtcattgtttgttactggcacaacagaagtgacagccagcagttcttccca
gagcccaggacagttttctgcctcacctgttctcctcatcatgaaaacctggtggccatt
ggctacaaggatggcatggtggtgataattgatatcagcaggaagagagaagttgtgcac
cggctgaggggccacgaggatgaaatccattgtctggcctggtgccctgtgcctggggaa
gagaggttacctgcttggcaggatgagctccagggagctccttcagaagaaggcaaggtt
ccaaatggggagctgacacaggacacagccacaaggaaaggttgttacctggcctctgga
agcaaggatcaaaccatacgaatatggagctgtaccagaggcaggagtgtgatgactctg
aagctgcctcccaccaagaggagaggtggagccgtggacccggcggtcaaggagcgcatc
tggctgactgtccactggcctgctggccacccctcagacctcgtgtccagtggctttgga
ggagaactgctcctttggaatttgacccagcctggcaaacgcaagtggactcttctggga
tcttcagaaggacaaaaccactccagaattgtgttcaatctcagttctgtgaagcaccaa
gacagagagctccttttttccatttcaatggacagagatgtgaaatgctgggatctgtca
actctggactgcagctggaccatgccctcccttggagggtttgtctacagccttgccttc
tcccccgtggacacaggctgcctcgccgtcggggttggggacagcatgatccgagtgtgg
aataccttgtccatcaacaacatttatgatgttaaaaccttctggcaaagcataaagtcc
aaggttacagcattatcctggcatccaactaaggaaggctccttggcttttggaacagat
gatggaaaagttggcatatttgacaccttgtccagcagtgctaagaacaagccacctcag
atttccagcacttaccacaagaagacagtgtacacattagcctggggtcctccaactcct
cctctgatttctggagaagaaaatgaacagccctctgtaactttatatagttgtgctgga
gaaggaattgtttttcagcacaatccctggaagcttaatggagaagcaaatgacatcaac
aaagtcatcagagacaccaattcaatcaaacacaagctgcctgcacgtacagaggtcagc
tggaaaccagatggcaaactcctggctcttggcaatgaggatggctcaattgaaatattt
caggcaccaaacttgaagttgctctgcactatccagcagcatcacaaattgatcaatgcc
attcgttggcaccatgagcacgggacccagccagagctgagttacttgatagcttcaggc
tccatcaatgccaccatttatgtgcataatctgaagagtgttgtagagaactcttcagaa
aatcctttgacaataacagagccttttcgaactctggctgggcacacagctaaaatcaca
agtctttcttggagcccccaccacgagggaagattggtgtctgcttgctatgatggcact
gcagaggtgtgggatgtgatgaaggaagagccactctgcaactaccgagggcaccagggc
cgcctgctgagtgtccagtggtcaccagtggagccagattgtgtttatacaggagcagat
gatttctctgttcacaagtggcacatctccaagcaggagcacacacggcctcctcagggc
aaaaagagtatagaattagagaagaaaagaagtatacagccaaaagtcaaagccaagaag
aagaaaaagcctgtaggcaagagcccaggcaagcaggatgcaaatgatgccatgaatgga
gatgacagcatgaaggaaatgctgctggaggaaaatggagtgtcagaccacgaaggagaa
aaagaagctcaggaggcagagttggctgataaagtctctgtgactgtgtccagggataca
tcttcatctgcatgtgattattcttcattcagcttgccaaagccttttgtgacccagaaa
gctgtgcctgtgaaaaaggatccacctaaagagaaaccaactcctgatgcctctctgaag
aagaggaagcctcgttctattctgcccttcagcacattaatggatcacagatcaaaagaa
gaattgcatcaggactgtttgaggctggctgcatgcctgaaaactaaagataataatgaa
gatgtgtcccctgacctcaaggattgcatccacctagggctgttcacagacagggattct
ctgcacaagatgattgatatggaaggaaagcagcacttggagaatgggcatgcagagctc
ttccagcagctcatgctgtggaaaggagacatgaagggtgtcctccaggcagctgctgag
agaggggagctcacagaccagctggtagccatgtcacccatggttggctaccaggcctgg
gtttggacagtggaagcctttgccaagcagctgtgttttcaggagcaatatgtgaaggct
gcctcccacctcctgtccatccataaagtctatgaggctatcgagctcctgaaagtgaac
aatttttacagggaagcaattgtaatggctaaggccaggctgcgaccagaagatccagtt
ctgaaggacctgtacagcagctgggcagctctgctggagaaagatggtcattattccatg
gctgccaaatgttatttgggagcttcctcaccctatgatgcagtcaaagtgttgtcaaaa
aagggggatgtggcatctcttaaaactgctgctgagcttgctctgatatctggggaggag
gagttgtcagcaactttgtctttgagatgtgcccaagacctgctgttatccaggaactgg
gtgggagctcaggaagtccttcagcagcataaaaccttatttggacaaagactggttttc
tgcctgaatgaactgctctgcagctgcctcagtgagaggaatcccagtgagcgaaagagc
cccgtgcccccctgttaccacagctgggagctgaacagagaggccccattttttgacatg
gtgacagaagtgtggcagaatgtgctgggcatggacacctctgaaaaagccacatgtgca
caggagcagcttcgcaggattgagcatcctccttcaaccagcaacacacacccaaagcag
gtgcttttccatatctcccatgacctggccctcgcagccctgagctgtcacttgggtact
tgggatgaggcagtgaaaagtattcttggggctgtgacccgcagttttgatgctgggaat
ttcactctgatgcaggagatttgcagtatcatccttcctgagggctgtgatgacctgaga
gacaaactggacagcacaaattctcagagcatggatgcctgcaggagtctggagggcttt
gtggcttacagactgctctatgacctgtggtggaacccacccaaagattcccttggcctg
cagaaggctgtgttgggtgctgtgccatgtcccagtgagcagacagctcttgaggagagc
tgtatttcaggtgacccatcccctgaggaaacggttcaaactgcagctgagatgggtgaa
aacctctgcagtacaactgaagttcctaagagtgagacacagagtgactcaagaactgat
ccagttgatgtggcagacagacagtcaaaactgaagggttgccaagtgctcctttcagaa
gagatggctgccttgcagaacacccagagggacatagctgaggtccaggagactttagca
gaaatgatccgccagcatcagcagcagaggaacaatctccaggaaaacacaaatggaaac
acccagggaagcaacctgaaacagagttcagagactgaatcagacaaaccatgctctgac
agcaaccagatgaatggcaaagatgaagcaaagcaaccggttacactccctgagctcaca
aagcagcttctgaaagcgaagcagaaattagctgaattcccagacaatttaaaggtcttc
ccattccctgacgtgctggagtgctgccttgtgctccttcaccttggatcccagtgtcct
cctgggctgcaggaagaggctctggctctccttaggaaacacggtggtgctggtgtttac
aaaaaggctggcaggagcttcttgacatga
DBGET
integrated database retrieval system
