Vidua chalybeata (village indigobird): 128795949
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Entry
128795949 CDS
T11587
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128795949 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128795949 (GSPT1)
03012 Translation factors [BR:
vcha03012
]
128795949 (GSPT1)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128795949 (GSPT1)
Translation factors [BR:
vcha03012
]
Eukaryotic type
Release factors
128795949 (GSPT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
128795949
NCBI-ProteinID:
XP_053813076
LinkDB
All DBs
Position
16:7447645..7469336
Genome browser
AA seq
628 aa
AA seq
DB search
MEANGNGSGSSSDSAPDCWDQADIEPGSGAGPGCAPPAAEAEAQQELLGAAFSRQLNVNA
KPFVPNVHAAEFVPSFLRSGPAPGLPPPSPPPGLPPPPPLGAPVEPSPEEQTTSCEGSNA
AVNMEISESVVENGEIEMSPEESWDHKEEPSEAELGGGPAGDAGPSEESAQEMMEEEEEI
PKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKN
RETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQAD
LAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEEC
KEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRS
VDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVA
PGENLKIRLKGIEEEEILPGFILCDLNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIH
TCIEEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRF
TLRDEGKAASAAGTDCCKSLLGLRATWQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacgggaacggcagcgggagcagtagcgactctgctcccgactgctgggac
caggcggacatcgagccgggcagcggcgccggcccgggctgcgctccgccggccgcggag
gccgaggcgcagcaggagctgctcggggcggccttcagccggcagctgaacgtcaacgcc
aagcccttcgtgcccaacgtccacgccgccgagttcgtgccgtccttcctgcggagcggc
ccggcgcccggcctgccgccgccctcgcccccgcccggcctcccgccgccaccgccgctc
ggtgcacctgtagagccttctccagaggagcagacaacctcttgtgaaggttcaaatgct
gctgttaacatggaaatttcagaatctgttgtggaaaatggagagatagaaatgtcccca
gaagagtcgtgggaccacaaagaagaacccagtgaagcagagctaggaggtggtcctgca
ggagatgcggggccttctgaagagagcgctcaggaaatgatggaggaggaggaggaaata
ccaaaaccgaaatctgttgtagcacctccaggtgctcctaaaaaagagcatgtaaatgta
gtattcattggacacgtagatgctggcaagtcaactattggaggacaaataatgtatttg
acaggaatggttgacaaaagaacacttgaaaaatatgaaagagaagctaaagaaaaaaac
agagaaacatggtacctttcatgggccttagacacaaaccaagaagaacgagacaaaggt
aaaacagtagaagtgggtcgtgcctattttgaaacggagaagaaacacttcactatttta
gatgctcctggacacaagagctttgttccaaatatgattggtggggcttctcaagctgat
cttgctgtgctggttatttctgcaagaaaaggagagtttgagactggatttgagaaaggt
ggacaaacaagagaacatgccatgttagcaaaaacagcaggtgtaaagcatttaatagtt
cttattaataaaatggatgatccaactgtaaactggagcaatgaaagatatgaggaatgt
aaagagaaactggtgccatttttgaagaaagttggcttcaatcccaaaaaggacattcat
ttcatgccctgctcaggactgactggagcaaaccttaaagaacagtcagaattctgtcct
tggtatattggattaccatttattccatacctggataatttgccaaacttcaaccgttca
gttgatggaccaatcaggctgccaattgtggataaatataaggacatgggcactgtggtc
cttgggaagctggaatcgggctctatttgcaaaggacaacagcttgtgatgatgccaaac
aagcacaatgtggaagttcttggaatcctttctgatgatgtagaaactgactcagtagcc
ccaggtgaaaatctaaagatcagactgaagggaattgaagaggaagagatccttccagga
tttattctctgtgatctcaacaacctttgtcattctggacgcacatttgatgcccagata
gtgataattgagcacaaatccattatctgcccaggttataatgcagtgctgcacatccac
acctgtattgaagaagttgagataacagccttaatctgcttggtagacaaaaaaacagga
gaaaaaagtaagacacggccccgttttgtgaaacaagatcaagtctgcattgcccgttta
aggacagcaggaacgatctgccttgagacattcaaagatttccctcagatgggtcgcttc
actttaagggatgagggtaaggctgcttcagcagcaggtactgactgctgcaaaagctta
cttggactcagagccacatggcagtga
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