Vidua chalybeata (village indigobird): 128796142
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Entry
128796142 CDS
T11587
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128796142 (TMC5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcha02000
]
128796142 (TMC5)
03037 Cilium and associated proteins [BR:
vcha03037
]
128796142 (TMC5)
Transporters [BR:
vcha02000
]
Other transporters
Pores ion channels [TC:
1
]
128796142 (TMC5)
Cilium and associated proteins [BR:
vcha03037
]
Other cilia and associated proteins
Stereociliary proteins
128796142 (TMC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
128796142
NCBI-ProteinID:
XP_053813482
LinkDB
All DBs
Position
16:8588780..8612068
Genome browser
AA seq
864 aa
AA seq
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MSYHYNEAFENPDYHFSETLEIDRRGSSQRNRFSHQTPYDSSLHGSYGEHRGREQNYPVA
IPMASLGPGSDYSQDLPRTGAYGNFTDSLSFEPEPEETYTPYSTFHVLDYPYTHGISSGS
EDSFIRRRNRRPPDEIFMTSSSTFETDPVCSEEEDLVGSLASMSTNERIKAIQKMPETMR
KKREIRNKVLKEITKKSRHRGAQCTQCLQGAAVSFRRFGNTLSEYFHQLRLWHKTLKIIG
AEFGTSVLSYFVFLKWLLNLNIFSFLINFGFITIPQFLAAEPNNLSFTGLELFTGAGYFQ
QTVLYYGFYTNATISKVENGPSYNMQLAYIFTVGIYFVICFLILLFSMAKFFSRNINPQT
FSVNASKLLCTWDFNITNEKAVKLQQKNLHTQIKEGLTEVNKEVQNFSAMERVVRIATHL
LAWLASLGTAVAACAGVYFLSINNLELFMKGYRNDLESQTAMLVLPVIVSLFNTLIPFFF
SWLGHLEKFQTPGQHIYVTITRNTILKMSIVGILCYYWLNIVATSESQCWETLVGQDIYR
LVLVDFIFCLLGSFFGEFLRRIIGTTVCMNLGLPEFDIGRNVLDLIYAQTLTWIGILFSP
LLPGIQMIAFFIVFFVKKVSLIRNCQPPRKVWRTAQMMTSFIFLLFCPSFLGVLSVIGVT
VWRLKPSEECGPFRGLSSMYAAVDEWIQILESYTASKWVAWIYHNLISSELFFFILSSIL
LIITYLYWQIIQGRKTMTELLRKQINNAGKDKIFLLKKLRALQRAKRSLSALGGRGQQRS
ASSSRQPAQEVPGYPERAFDRNQNTSYNEHPFSVEISSSSDSPPGREPSPPRRSPGASRA
LALALRAREAALRQDGDGSGGVQP
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcattacaatgaagcctttgaaaatccagactaccacttctcagagacattg
gaaattgatagaagggggagttctcaaaggaatcgattctctcaccaaaccccttatgat
tcatctctgcatggttcctatggagaacacagaggcagggagcagaactaccctgtggcc
atcccaatggcttccctggggcctggctctgactacagccaggatttacccagaacaggt
gcatatggaaatttcacagacagtctttcctttgagcctgagccagaagagacttacacc
ccctattctaccttccatgtgctggattatccctacactcatggaatttccagtggatca
gaagacagcttcattcggagacgcaaccgaagaccacctgatgagatcttcatgacttct
tccagcacgtttgaaacagatccagtgtgcagtgaagaggaagatttagttggaagtctt
gcaagtatgtccaccaatgaaaggattaaagcaatccagaagatgccagagaccatgaga
aaaaagagagagatcagaaacaaagttcttaaagaaataacaaaaaaatcaaggcatcgt
ggtgctcagtgtacacagtgtctgcagggagcagcagtgtcatttcggcgattcggaaat
acactttcagaatattttcaccaactgcggctgtggcacaagactctgaagatcattggt
gctgagtttggaacaagtgtgctttcttactttgttttcttgaagtggctgctaaatttg
aacatcttctcattcctcataaactttggtttcatcacaattcctcagtttcttgcagca
gaaccaaataacctttcattcacgggcctggagctgttcactggagctggttattttcaa
caaacagtgctctactatggcttttacaccaatgctacaatcagtaaagtggagaatggt
ccatcttacaacatgcagctggcctatattttcactgttggaatatattttgtcatctgt
tttcttatcttgttgttcagcatggcaaaattcttctccaggaacattaaccctcagaca
ttctctgtgaatgccagcaagctgctctgcacttgggacttcaatataactaatgaaaaa
gctgtgaaactgcaacaaaagaatctccacacacaaataaaggaagggctcactgaagtc
aacaaagaagttcaaaatttttctgcgatggagagagttgttcgtattgctactcatctt
cttgcttggcttgcttccctgggaacagcagtagctgcttgtgctggtgtttacttcctc
tccattaataacctcgagctgtttatgaaagggtatagaaatgatctagagagccaaact
gccatgttggtgctacctgtgattgtatctctcttcaacacattgattccattcttcttc
tcctggcttgggcacctggagaagtttcagactcctggacagcacatatatgtcactatt
accagaaataccatcctaaaaatgtcaattgttggaatactgtgctactactggcttaac
atcgtggctacctcagagtcacagtgctgggaaactttggttggccaagatatttatcgt
cttgttctagttgacttcatattttgtttgcttggctctttctttggggagttcttacga
agaattattggaactacagtctgcatgaacctagggctgccagaatttgatattggacga
aatgttttagatttgatctatgcacagactttgacctggattggtatcctgttctcacct
ctgttgcctggtatccagatgatagcattttttatagtattttttgtgaagaaggtcagt
ctgataaggaactgccagccccctcgcaaagtctggagaactgctcaaatgatgacatcc
ttcattttcctgctgttttgtccttccttccttggagtcctgtctgtcattggagtcact
gtctggaggttaaaaccttcagaagaatgtggtcctttcagaggtttgtcttctatgtat
gctgcagtcgatgagtggatacaaatactggaaagttacactgcctcgaaatgggtagcg
tggatctaccataatttaatttcaagcgaacttttcttcttcatcctgtctagtatttta
ctaattattacttatctttactggcaaataatacaaggaagaaagaccatgaccgaactc
ttacgtaagcaaattaataatgcaggaaaagataagatatttctgctcaaaaagctacga
gcactgcaaagagcaaagcgaagcttgtctgcactgggaggaagaggccagcagagaagt
gcctcttcatccaggcaacctgcccaggaggtgccaggctacccagaaagagcatttgac
agaaaccaaaacacatcctacaatgagcatcccttttctgttgagatctcaagcagcagt
gactctccaccaggccgggagcccagcccgccccgccgcagccccggcgcgtcccgggcc
ctggcgctcgccctgcgcgctcgggaagcggcgctgcggcaggacggcgacggcagcggg
ggagttcagccctga
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