Vidua chalybeata (village indigobird): 128796450
Help
Entry
128796450 CDS
T11587
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcha01002
]
128796450 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcha04121
]
128796450 (USP42)
Enzymes [BR:
vcha01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128796450 (USP42)
Peptidases and inhibitors [BR:
vcha01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128796450 (USP42)
Ubiquitin system [BR:
vcha04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128796450 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
128796450
NCBI-ProteinID:
XP_053814074
LinkDB
All DBs
Position
16:complement(9511753..9530378)
Genome browser
AA seq
1334 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAAFMGPRLPPHMIKSSSRLNGNGPLKEDPSAVGVAVKRPSS
APPTACVQNWAISRPSMTDPSKTQKITISIHNKLPTRQAVPQAECPSSAVEEEDLKPLPS
ATITNSSTAEPTSNLSTVSVATNVSKQEVPDEIFVEPAVNGNPKLCSDNMVPFSAEPSGK
SEESKGLFKRHCNVISSNGILIGKMVHTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDPTCQVQPVKPSEIFFSKANGVLEAMPKALSPDPQGILESLTYSQLNSL
SEEKSVSGPQKSSDNDGVTDTVVMEALFAYEESRKVPSNFSCEVEKLFTQSDSETIFTKE
EVPESIVTKADNAHLNINGQHKVRKKSLDTEGEFLGQCESEDIRDKDKLRRSKEAELISK
ENPLYIKGSPESKEKLGQISSIKPDIECSSKKLASLDITDKCQDTKDISNNYVEVPPVND
SSITKLDKVLESQFSRADEGPSNKICEDDDKHMKKNKKKIHDSKRTDKEHYRRKRENSDT
EEKERQTRNKPDDHSHRRRSSHSVETNKQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRERYYQDEPRRWEKCRYYNDYYSSHGTRDGR
DRRSSHCDKDYDKLSQAYSRSHKDYHCKSRWAHSTLSREEDVHHFSSHRANFHHCSVPQQ
HSEKYSRERHALPPVSAHSNLEDSSRENEKEKLRNGKRKYSHQEESGSDIEKKFRKTDDQ
RIKKYKKVKKKKKSKDKHREKDYKHYDLDCSVLHFDNDNRKHKKKKKKKKHDRKLKDLLE
YLDPHFQKKTWEKKEESRPPDDHLCEQYRNQGSKQPYKEEKPSGAGDSKKYSSMASTEYV
RDVELTDESLQYSD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacggtct
gacaaatctatgaaaccccgtactaaaaaaatgacgtctcgcactgcaagtttgggccgg
gtaccccctacagaagatccaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccaaagagatctagttgttaatgat
gggattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcaa
caaacacaaagtgttggagttggactgcagaacctcggcaacacatgtttccttaattct
actctccagtgtttgacctacacgcctcctcttgccaattacatgctttcacttgagcac
accaagtcatgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgctctaataatgccatcaaacctacgtctgttatcaatggccttaaa
agaataggaaaacatttccactttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagcaccaaattagacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcagtgtcagatacgtacgagccatttctcgacgttactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacagctggat
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttccagcgtcaaagagatac
acgatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcaaattttacg
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatctattggagaacccctcatctatgctttatatgcagttcttgtacatagtggc
ttcaactgtaatgctggacactatctctgcttcataaaggctggcaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctacgatctgacgctgggggagcgagccttttacctg
cccgcgccctcctacccgcgctccttcctgggccagcgcggggccaacagcaagcaggct
gcattcatgggacctcggcttcctcctcacatgattaagagttcaagtcgtttaaatgga
aatggacccttaaaagaggatcccagtgctgttggtgttgctgtaaaaaggccatcttca
gctccaccaacagcttgtgttcaaaactgggcaatttccaggccgtcaatgacagaccct
tccaaaacccagaagatcacgatcagtattcacaacaagctgcccactcggcaggcggtg
ccgcaggcggagtgtccgagcagcgctgtggaggaggaggatctgaagccccttccttca
gccacaattacaaactcttccacagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgtctccaagcaggaggttcctgatgaaatctttgttgagccagcagtgaat
ggaaaccctaagctctgttctgacaacatggtccctttcagtgcagaaccttcaggaaaa
tccgaggagtccaagggcttgttcaaaaggcattgcaacgtcatatcttccaatggaatt
ctgattgggaagatggtccatacattgcataattcccattcatcctgtcagaatgcagaa
gaaagatcccagcatgagctgccaaaaattgattctctaaatggtgctattagtttagat
aatgaatataaagaaaatggactgaaacttgatgatcccacttgccaagtccaacccgtt
aaaccttccgagattttcttctctaaagcaaatggagtgcttgaagcgatgcctaaagct
ttgtcaccagatcctcaaggtatcttagaatctcttacgtacagccagttgaacagcttg
tcagaggaaaagagtgtctctggacctcagaaatcctctgacaatgatggagttacggat
actgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaacttt
agctgtgaggttgagaaactttttactcaatcagattctgaaaccatttttaccaaagaa
gaagttcctgaaagtattgtaacaaaagctgataatgcacatctcaatatcaatggtcag
cacaaggttaggaaaaaatccttggatactgaaggtgaattccttgggcagtgtgagtct
gaagacatcagagataaagacaaactaagaagatcaaaagaagctgaactcatttcaaaa
gaaaatcctttgtacatcaaaggatctcctgagagcaaagagaaattagggcaaatttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagat
aaatgccaagatacaaaggacatttctaataactatgtagaggtaccacctgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagacgaggga
ccgagtaataaaatatgtgaagatgatgataaacatatgaaaaaaaataagaaaaaaatc
catgactctaaaagaactgacaaagagcactaccggaggaagagagaaaactcggacact
gaggagaaggagaggcaaaccagaaacaaaccagatgatcattcccacaggaggaggagc
tctcacagcgtggaaacaaacaagcagagccgtcataagcaggagtattgtagtgagagc
aagtacagatcctcccacaatgaaagaaacagtcccagtaatggcaggagctcaggaaaa
tattctcgttacagatcccgaagcagagaaaggacagatccagacaggaataggtactat
tattccaaaggagacagaccttggattagagaaagatactatcaagatgaaccacggaga
tgggaaaaatgcaggtactacaatgattattattcctcccatggaacaagagatggtagg
gacaggaggtcctctcattgtgataaagactatgacaaattgagccaagcttacagcagg
tcacacaaggattatcattgcaaaagcagatgggctcacagcacactctcccgagaggag
gatgtgcatcacttcagcagccacagagcaaacttccaccattgttcagtacctcagcag
cactcagaaaaatactcccgtgaaaggcacgcacttccaccagtgtcagctcactcaaat
ttggaggactcttcccgggaaaatgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaattccgaaagacagatgaccaa
agaatcaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaacattatgatttggattgctctgtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaactgaaagacttactggaa
tatttagatcctcatttccagaagaaaacatgggagaagaaggaagaatcccgtcctcca
gatgaccatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaagag
aagccttctggtgcaggtgacagcaagaaatacagctccatggcatccactgagtatgtc
agagatgtggagctgactgatgaaagccttcaatactcagactga
DBGET
integrated database retrieval system
