Vidua chalybeata (village indigobird): 128796847
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Entry
128796847 CDS
T11587
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type substrate 1-like isoform X1
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128796847
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vcha04515
]
128796847
04090 CD molecules [BR:
vcha04090
]
128796847
Cell adhesion molecules [BR:
vcha04515
]
Immunoglobulin superfamily
SIRP family
128796847
CD molecules [BR:
vcha04090
]
Proteins
128796847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
Ig_3
C2-set_2
I-set
V-set
ig
Ig_2
C1orf162
SIT
Ig_IgSF3
LLCFC1
PKD
CcmD_alt
TUNAR
DUF6479
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
128796847
NCBI-ProteinID:
XP_053814854
LinkDB
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Position
17:7937935..7961924
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AA seq
503 aa
AA seq
DB search
MEPHPRDPGRTAWALPCLLLLALPGVGAQAGQDFSLQQPQAKVTVAAGETLTLNCTTSGT
AGPGPVMWLKGWGSGNTTIYDQSKQDSSSRVTRAVDRSDTDFTIRIRNVQPEDMGTYYCV
KFVKGNTGDDEVFQHGRGTEVSVQAKPSPPLVSGPEQRARPGQSVPFTCTTGGFFPEKIG
LKWFKNEDPMGGQPPRVTEWKMKTYNMSSTVTVTLQKDDILSQLICEVRHSTLPAPLRGH
YQLSRVLRVPPSIEVRAEPSPVEVNQTVTFTCLVKEFYPADVSVSWLENGIEIKVENVSR
PLELPRRLFELRSQVEVQATEEKNGSTITCMVVHDAQAPANKSAFLWISNPAQGGLSNGF
QMSKDDLLIYIVVGVVCTVLALLVAAILYLIRTKQIKAGKSSPSARLHEPEKSSEATTQE
SDPNNLTYADLNFDKERKSIRRMVEMSQQSEYACIQTNQAPNGDDNLTYADLDMVHLSKA
PKRPAPRPEEAGSEYASVQITRK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcatccccgggatcccggccgcaccgcctgggcattgccctgcctgctgctg
ctcgccctgcccggtgtgggtgcccaggcgggtcaggacttcagtctgcagcagccccag
gccaaggtgacggtggcagccggggagacgctcaccctgaactgcaccacatctggaacc
gctggaccaggtcctgtgatgtggctgaagggctggggcagtgggaacacgaccatctat
gaccagagcaagcaggattcctcctcccgtgtgacgagagcagtagataggtccgacaca
gacttcaccatccgcatcaggaacgttcagcctgaggacatgggcacctactactgtgtg
aagtttgtcaaggggaacactggtgatgatgaggtgtttcagcatggccgtggcacggag
gtgtctgtgcaagccaaacccagccccccgctcgtgtctgggcctgagcagagagcgagg
ccagggcagtcggtgcctttcacctgcacgactggagggttctttcctgaaaagattggg
ctgaaatggttcaagaacgaggaccccatggggggtcagccaccccgggtcactgaatgg
aagatgaaaacctacaacatgtccagcacagtgacggtgaccctgcagaaggatgacatc
ctctctcagctgatctgtgaggtgcggcactccacgctgccagccccgctgcgtggccac
taccagctcagcagagtcctgcgagttccccccagcatcgaagtgcgcgctgagccgagc
cccgttgaggtgaaccagaccgtgaccttcacctgccttgtgaaagagttttacccagca
gatgtgtccgtttcctggctggagaatgggattgagataaaggtggaaaacgtctcccgg
ccgttggagctcccccggcgtttgtttgagctgagaagccaggtagaggtgcaagccacc
gaggagaaaaacgggtccacgatcacctgcatggtggtgcacgatgcccaggcccctgcc
aacaaatcagccttcctgtggatctccaacccggcccaagggggattgagcaacgggttc
cagatgtctaaagatgatctgctcatctacattgtggtgggtgtggtctgcaccgtgctg
gccctgctggtggctgcgattctatacctgatccggaccaagcagatcaaggcaggtaaa
agctcgccatctgccaggttacatgagccagagaagagcagcgaggccacgacccaggaa
tctgaccccaacaacctgacctatgccgacctgaacttcgacaaggagaggaagagcatc
cggcggatggtggagatgagccagcagtcggagtacgcctgcatccagaccaaccaggcg
cccaacggcgacgacaacctcacctacgccgacctggacatggtgcacctcagcaaggcg
cccaagaggccggccccgcgccccgaggaggccggctctgagtatgccagcgtccagatc
accaggaaatga
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