Vidua chalybeata (village indigobird): 128796965
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Entry
128796965 CDS
T11587
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128796965 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128796965 (DEPDC5)
Membrane trafficking [BR:
vcha04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
128796965 (DEPDC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
vWA_IML1
IML1_N
IML1_small
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
128796965
NCBI-ProteinID:
XP_053815039
LinkDB
All DBs
Position
18:complement(9258264..9297358)
Genome browser
AA seq
1601 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPEAHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPSGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRMGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKPLTEKAKNNRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPARAQRCTT
FRSVRERESRTRKSSSSYDVSCSPSLQSRALPPEEVRSQASDDSSLGKISNILMIPRPHL
HQCEVSSSLGYTSTRDFLENTLESQQRDSSAPGRFHVGSAESLLHIRPGGYAPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGSEQQDLTHSSAELLE
LAYHEATGRHVSSRHPGDSASFLSFSGTEEYGNGLGAGPGTGVNLKTQNKDSLEDAVSNS
PDPILTLSAPPIVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPE
ADIDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQSKPQKPAPAVPPPLSSSPLYSRGL
VSRNRPEEENQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDSE
FVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRIM
EGEAHCDVYGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKGLQIAGP
IPTHSLEQSGPPIGKKGTSALSALLQMEASQKTLGEQQTAMLSGKSSVQPSESGSIAITP
TYMDSPRKDGAFFMDFVRSPRTASTFYSQVSIDQSVPATSDGSALLPTGQVPDRGSTQAL
GSTQNAAEPGYSTAGAAEGSSQQCSTSALTSSSTLVEILEAMKHPTTGIQLLSEQKGLSP
YCFISAEVVHWLVNNVEGVHTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIVV
DKEPDRVGLQQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPSRPASY
ASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAA
FEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPL
NVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIAHRFGFVQDKYSASAFNFPAENKPQYI
HVTGTVFLQLPYSKRKFSSGQQRRRRNSTSSTNQNMFCEERIGYNWAYNTMLTKTWRSSA
TGDEKFADRLLKDFTDFCWNKDSRLVTFWTDCLDKMHASAP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctcgtcatacataagaaggggtttggaggcagtgat
gatgaactggtggtgaatcctaaagtatttcttcaaatcaagctgggagatgttgtggaa
attgcacatcccaatgatgaatacagtcccctgcttctccaagtgaagtcgcttaaggaa
gatttgcagaaagaaacgataagtgtggatcagacagttgcacaagtgttccgcctgcgg
ccctaccaggatgtccatgtcaatgttgttgacccaaaggaggtgaccttggacttggtg
gagctgacatttaaggatcagtatattgggcgtggggatatgtggcgactgaagaagagt
ttggtcagcacatgtgcatatgtcacccaaaaagttgaatttgcaggtatcagggcccag
gcaggtgaattgtgggtaaagagtgagaaagtcacttgtggatacatcagtgaggacacc
cgggtggtcttccgctccacgtctgccatggtttatatttttatccagatgagctgtgaa
atgtgggattttgatatttatggggatctatactttgagaaagctgtgaatggtttcctt
gctgacctcttcacaaaatggaaggagaagaattgcagccatgaagtgacagtggttcta
ttttcaaggacattttatgaagcaaaatctatagatgagtttcctgaagcacatcgtgca
tcaattcggcaggatcatgagggaagattttatgaagatttttacaaagtcgtagttcag
aacgagaggcgggaggagtggacctccttgcttgtgaccattaaaaagcttttcatccag
tatcctgtgctggtacgactcgagcaagcagagggctttccttcaggttacaattctacc
tcagcacaagggaactacctggaggctataaatctttcattcaatgtgtttgacaagcat
tacatcaaccgcaacttcgaccgcacggggcagatgtcggtggtgatcacccccggcgtg
ggcgtgttcgaggtggaccggctcctcatgatcctgaccaagcagcgcatgattgacaac
gggataggtgtggatttggtgtgtatgggagagcaacccttgcatgctgtaccactcttt
aagctccataatcgctgtggccctggtgactcacgaatgggtgatgactacaatatccca
cactggataaatcatagtttctacacatccaaaagccaactcctgtgtaacagcttcact
ccacggatcaagctggcaggaaggaagccactgacagagaaagcaaaaaataatcgtgat
gcctcattaggagctccaaaggatgctgagaatgccttgcctatccaggtagattatgat
ggctatgatgcccaggtgttcagactgccaggcccagccagagcccagcgctgtaccact
ttcaggtcagtgagggagagggaaagccgcacgaggaagagctccagctcgtacgacgtc
tcgtgcagcccctccctgcagagccgcgcgctgcccccggaagaggtgaggagccaggct
tctgacgacagctctctgggcaagatctccaacatcctgatgatcccacggcctcacctg
caccagtgtgaagtcagcagctccttgggctataccagcaccagagatttccttgagaac
acgctggagtcgcagcagcgcgactccagcgccccggggcggttccacgtgggcagcgcc
gagtccctgctgcacatccgcccgggggggtacgcgccccagcgcgccctcatcaacccc
ttcgccccgtcccgcatgcccatgaagctgacgtcgaaccgcaggcgctggatgcacacc
ttccccgtgggtccctcaggagaagctatccagatccaccatcaaacccgccagaatatg
gcagaaatgcagggcagtgagcagcaggatttgacacattcctctgcagagctgctggag
ctggcttaccatgaggcaactggcagacacgtcagctctcggcatccaggggatagtgcc
tccttcctgagcttcagcgggacggaggagtacgggaacgggctgggggccggcccgggc
acaggggtgaacctcaaaactcagaacaaggattccttggaagatgctgtctctaattct
ccagatccaattctgacgctgtctgctccccccatagtgccaggcttctgttgtacagtt
ggagtggactggaaatccctgaccaccccggcctgcctccctctcaccacggattacttc
cccgaccgccagagcctgcagaacgattacaccgagggctgctacgacctgctgccagag
gctgacattgacaggagggatgaggaaggagtgcagatgacagcccagcaggtgtttgag
gagtttatttgtcagcgtctcatgcaaggctatcagattattgtgcaatccaagccgcag
aagccggccccagccgtgccacccccactcagcagcagtcccctgtacagcagaggtctt
gtgtcaagaaatagacctgaggaagagaatcaatactggctgagcatgggccgtactttc
cacaaagtcaccttaaaagacaaaataattactgtgactcggtacctgccaaagtatcca
tatgaatctgctcagataaactacacctacagcttgtgcccctcacactctgactcggaa
tttgtctcttgctgggtagaattttcccatgagagacttgaagagtacaagtggaattac
ttggatcagtatatctgctctgctggttcagaggatttcagccttatcgagtccctgaag
ttctggaggacgcggttcctgctgctgcccgcctgcatcagcgccaccaagcgcatcatg
gagggcgaggcgcactgcgacgtgtacggcgacaagccccgctcggacgaggaggagtgg
cagctcctcgatggcttcatccgcttcgtggagggcttgaaccgcatccgccgccgccac
cgctccgatcgaatgatccgaaaagggtctgccatgaaaggcttgcagattgctggtcca
attcccactcactccctggagcagtctgggcctcccattgggaaaaaaggaacctcagca
ctctcagctctgctgcagatggaagccagtcagaagactctgggggagcagcaaacagca
atgctttctgggaagagctctgtccagccttcagagagtgggagcattgctatcacaccc
acctatatggacagccctcggaaggatggggccttctttatggactttgttcgcagccca
cgcacagcttcaaccttctactcccaggtctctatcgatcaatcggttcctgcaacctca
gatggcagcgccttgctacccacggggcaggtccctgacaggggcagcacccaggccctg
gggagcacccagaatgctgcagagccaggatacagcacagctggtgctgcagagggcagc
tcccagcagtgttcaacaagtgctctgacttcctcctccactttggtagagattcttgaa
gccatgaaacaccccaccacagggatccagctgctctctgaacagaagggcctctccccc
tactgcttcatcagtgcagaagttgtgcactggctggtgaataacgtggaaggggtgcac
acccaggccatggccattgacataatgcagaaaatgttagaagagcagcttattgtccat
gcatctggagaagctttacgaacatttatttatggcttttatttttacaagattgttgtg
gacaaagaaccagaccgagtggggctgcagcagcctgccatgtggcacacagctgccatg
gatgacttctcagccttccagaggaaatggtttgaggtggcctttgtggcagaagagctc
ctgcactcggagatcccggcgttcttcctgccctggctgcccagccgccccgcctcctat
gcaagtaggcacagttcctttagccgcagtttcggaggacggagccaggcagctgcactc
ttagctgccacggtgcccgagcagcggacggtgacgctggatgtggatgtgaacaaccgc
acggaccggctggagtggtgcagttgttattaccatggcaatttctccctgaacgctgcc
tttgaaatcaagttacactggatggcagtgactgcagctgttctttttgagatggttcag
ggttggcaccggaaagccacctcctgtgggttcctgcttgtcccagtcctggaaggcccc
tttgctttgcccagttacttgtatggggacccacttcgagctcagctgttcatcccactc
aacgtgagctgcttgctgaaggaggggagtgagcatttgtttgatggctttgaaccagaa
acatactgggaccgaatgcatcttctccaggaagcaatagctcacagatttggatttgta
caagataaatattcagcctctgcattcaacttcccagcagaaaacaagccccagtatatc
catgtcacagggacagtgtttttgcagctgccatattccaagcggaagttttccagcggg
cagcagcggcgccggcgcaactccaccagctccaccaaccagaacatgttctgtgaggag
cgcattggctacaactgggcctacaacaccatgctgaccaaaacctggcgctccagcgcc
actggcgacgagaagttcgcagaccggttgctgaaagacttcacagatttttgctggaac
aaagacagccggcttgttacgttctggactgattgtctggacaagatgcatgctagtgct
ccgtga
DBGET
integrated database retrieval system
