Vidua chalybeata (village indigobird): 128797150
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Entry
128797150 CDS
T11587
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04142
Lysosome biogenesis
vcha04144
Endocytosis
vcha05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128797150 (CLTCL1)
04142 Lysosome biogenesis
128797150 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128797150 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128797150 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcha04147
]
128797150 (CLTCL1)
Membrane trafficking [BR:
vcha04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
128797150 (CLTCL1)
Exosome [BR:
vcha04147
]
Exosomal proteins
Proteins found in most exosomes
128797150 (CLTCL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
128797150
NCBI-ProteinID:
XP_053815432
LinkDB
All DBs
Position
18:complement(11759177..11793082)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGNYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMEHSLLQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIGLLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLFLVKPYLRSVQNHNNKGVNEALNNLLTEEEDFQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgcccattcgcttccaggagcacttccagctccaaaatttgggcatt
aatccagcaaatattggattcagcaccctaacaatggaatctgacaagttcatctgcata
agggagaaagtaggagagcaggcacaagtagtgataattgacatgagtgatccaacaaca
cccatcagacgtccaatttctgcagaaagtgccatcatgaatccagcctctaaagtaata
gcgctaaaagctgggaaaacacttcagatttttaacattgagatgaaaagtaaaatgaaa
gcccacacaatggcagaggaagtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtgacagagacagcagtgtaccactggagcatggagggagaatcacaaccccaaaag
atgtttgatagacacgctagtcttgcaggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtattcggttgatagaaaagtctcccaacctatagaaggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttctaccctcttttgttttgctgtg
aggagtcctgcaggaggcaagctgcacataatcgaagtaggtcagccagctactggaaat
cagccatttgttaagaaagctgttgatgtgtttttcccacctgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcatggtgtaatttatctgatcaccaagtatgga
tatatccacatgtatgatttggagtctggagtgtgcatctacatgaaccgtattagtgct
gatactatctttgtcacagctcctcatgaacctacctcaggcattattggtgtgaacaaa
aaaggacaggtgctttctgtatgtgttgaggaagacaacattgtgaactatgctacgaat
gttctccagaatcctgacttgggactgcgaatggctatacgtagtaacctagcgggggca
gaggagttatttgccagaaagttcaacacactgtttgctcaaggaaactatgcagatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaattaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccctgctccagtactttggaata
ttgcttgaccagggacagctgaacaagtttgaatctctggagctctgtcgccccgtcctg
cagcagggccgcaaacagcttctggagaagtggctgaaggaagacaagctggagtgctcg
gaggaactgggagacttggtgaagacggctgacccgacccttgcactcagcgtctacctt
cgagctaatgtgccaaacaaagtgattcagtgttttgctgaaactggccaattccagaaa
atagtgctgtatgctaagaaggttggctataccccagactggatcttcctactgagaagt
gtgatgagagtcagtccagaacaaggcctgcagttctctcagatgctggtacaggatgag
gagccactggctaacattaaccagattgtggatgtgttcatggagcacagtcttctgcag
cagtgcacatcctttttgttggatgccctgaaaaataaccgccctgcagaaggccacctt
cagacccgtctcctggaaatgaatttgattcatgccccacaggttgcagatgccattctt
ggaaaccaaatgtttacgcactatgatcgtgctcatgttgcccagctgtgtgaaaaggca
ggcttgctccagcgagctttggagcactacacggatctctatgatattaaacgtgcagtt
gttcatactcacctcttgaatcctgagtggcttgtgaacttctttggctctctctcggtt
gaagactccgtggagtgtttgcgtgccatgctgtcagctaacattaggcaaaacctacag
ctgtgtgtgcaagttgcttctaaataccatgaacagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
tttagccaggatccagatgttcacttcaagtacatccaggcagcttgcaagactggtcag
ataaaggaagtggaaagaatctgccgtgaaagtaactgttataacccagaacgagtgaag
aacttcctgaaggaggcaaagctcacagatcagcttcctctgatcattgtctgcgatcgg
tttgactttgttcatgacctggtgctctatttatatcgcaataatctgcagaagtatatt
gagatctacgtacagaaggtgaatcctagccgtataccagcagtggttggagggcttctt
gatgtagattgttctgaggacgtcatcaagaacttgatcatggtggtgagagggcagttc
tccacagatgagctggtggctgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcgactcataatgctttggcc
aaaatctacattgacagtaataataatccagagcgcttccttcgtgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgct
tatgagagggggcagtgtgatctggaactcataaaggtgtgcaatgagaattccctgttt
aagagcgaggctcgctatctggtgcgcaggaaggaccctgagctctgggcaaatgtactg
gaagagaacaacccattcaggcggcagcttattgaccaggttgtccaaacagccttatca
gagacacaggatccagaggaagtttccgtaactgtgaaagctttcatgactgctgatctg
ccaaatgaactgattgagttattggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaatctccagaatctgctgatcctgactgccattaaggctgaccgcacccgagtg
atggaatacatcaatcggctggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctatatgaggaagcctttgctatattcagaaaatttgatgtcaatacttca
gcaattcaggtgctgattgagcacattggcaacttagaccgtgcttatgaatttgcagag
agatgtaatgaaccagcagtgtggagccagctggccagagcacagctccagaaggacttg
gtgaaggaagccattgactcctatataaaggcagatgatccatctgcctacatggaagtc
gttcaggcagctaatagaaatgataattgggaggacttagtcaagttcttacagatggcc
aggaagaaggctagagagtcttatgtagagacagaacttatttttgctttggcaaaaact
aatcgtctgtcagaactggaggagtttattagtggccctaataatgcccatatacagcag
gttggtgatcgctgttacgaagaggggatgtatgaagcagctaaacttctctataacaat
gtatccaactttgctcgcctggcatctaccttggtgcaccttggggagtatcaggcagca
gtggacagtggccgcaaagccaatagcacaaggacttggaaggaggtctgctttgcatgt
gtggatggaaaagaattccgcttggcacaaatctgtggtttacacatagtcatccatgct
gatgaacttgaggagctgatcagttactatcaggatcgtggctactttgaagaactgatt
ggccttttggaagctgctttgggcctggagcgtgctcacatggggatgtttactgaactt
gccatcttatactccaaattcaagcctcagaaaatgagggaacatctggagcttttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctgtatgacaagtatgaggagtatgacaatgcaataattactatgatgaat
catcccactgatgcctggaaagaaggccagtttaaagacataattgccaaggtggccaat
gtggagctgtattacaaagccttgcagttctatttagactacaaacctctgctgatcaat
gatctcctgcttgtattatctccacgactggatcacaccaggacagtcaattttttctca
aaggttaatcagctatttctagtaaagccctacctgcgttcagtccagaaccacaacaac
aaaggagttaacgaagctctaaacaaccttttaacagaagaggaagatttccagggtttg
agagcttccattgatgcctatgacaactttgataacataacattggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcgtacttgtacaagggtaacaaccgc
tggaagcagagtgtggagctgtgcaagaaagaccgtctgtataaggatgctatgcagtat
gctgcggagtccaaagatgcagagttggctgagaagctgctccagtggttcctggaagaa
ggcaagcaggagtgctttgcagcctgccttttcacatgctatgacttgctgcacccagat
gtagtcctggagttggcatggagacataacatcatggactttgcaatgccttatttcatc
caagtgatgagagagtaccttaccaaagttgatggactgttctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtacctccccaggcaaacttc
ccatatggatacacagcaccaggattcacccagccgcctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
