Vidua chalybeata (village indigobird): 128797645
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Entry
128797645 CDS
T11587
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128797645 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcha02000
]
128797645 (TMC6)
03037 Cilium and associated proteins [BR:
vcha03037
]
128797645 (TMC6)
Transporters [BR:
vcha02000
]
Other transporters
Pores ion channels [TC:
1
]
128797645 (TMC6)
Cilium and associated proteins [BR:
vcha03037
]
Other cilia and associated proteins
Stereociliary proteins
128797645 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
MiaB_C
Motif
Other DBs
NCBI-GeneID:
128797645
NCBI-ProteinID:
XP_053816364
LinkDB
All DBs
Position
19:complement(6616032..6622791)
Genome browser
AA seq
799 aa
AA seq
DB search
MFQPPSITLHVPEGSESDGQEPSPDNERALHTSFHQLILEQSSLIEAGLELELQERGRES
PARLAVPDACAMAWPEPGQGEEHPSYSSASLQILASMPSRTIGRNLGAIISQYCNRTARL
RRRSGRPPLQQLCRTARPSLRQYDLEADPTRATLEEKRRLLVKELLSLSPSQCSHMLLTM
PLSLAEKRILRRQLSGQRGPVRQHAHHWAPFSPCGWSKVCVGLGCRGLWYRLLSLLRTAQ
PGHYALKQIGGRFGSSVLSYFLFLKTLLMLNFFSFLILLAFVVVLQAVYPTASVSPQPFT
GLEVLTGAGYFTHSLLYYGYYSNVTLNDPCTSSPEGSVCPLAAPLLPYNLPLAYLFSVGV
SFLVTCILLVYSVSRSFRESVGSSTGDLAIKVFCAWDFKVIQRRSVKLQCENICTQLKEL
LGEQRSRSHSQSRCQCLRHCVVVLLAWALALGSVLGCVLAVHYFSEHMHVVQQEQQARGS
GRWQQEAILLVLPLVVSLLNALMPHLYNLLAMWEKQDSPVTQVYVAITRNLILKMVILIL
LCYHWLSRSVVCSTEECWETCVGQDLYRFMVMDFIFTLLDTLFGELIWRLILEKRLKTKQ
RPEFDIARNVLELIYGQTLTWLGVLFAPLLPAVQMLKLLLLFYIKKSSLMRNCQSPSKPW
QASRMSTVFITLLCFPSFLGAAAFLSYTIWSVQPSETCGPFRGLETIYKSGKRWVLVLEK
SNPNITWFAWVYQHLLENTSPLFFVSVALIAVIYFNIQVVRGRQRVICLLQEQIANEGED
KVFLIQKLHSVYRQRHRRF
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgttccagccgccctccatcaccctccacgtccccgagggctccgagagcgatggccag
gagcccagtccggacaacgagagagccctgcacacctcattccaccagctcatcctggag
cagagcagcttgatcgaggcaggtctggagctggagttgcaggagagaggcagagagtcc
ccagcccgcttagctgtgccagatgcctgtgccatggcctggccagagcccgggcaaggt
gaggagcaccccagctactcctctgcctccctgcagatcttggccagcatgcccagccgc
accatcggacgcaacctcggggccatcatctcccagtactgcaaccgcacggcgcggctg
cggcgccggagcggccgcccgccgctgcagcagctctgccgcacggcacggcccagcctg
cgccagtacgacctggaggctgaccccaccagggccacgctggaagagaagcggcgcctg
ctggtgaaggagctgctgagcctctcacccagccagtgcagccacatgctgctcaccatg
cccctcagcctggcagagaagcgcatcctccggcggcagctgagcgggcagaggggccca
gtgaggcagcacgcccatcactgggcccccttctcaccctgtggttggtccaaggtctgc
gtcggcctcggctgccgaggtctctggtacaggctcctctccctgctccgcactgcccag
cccgggcactatgccctgaagcagatcggtggccgctttggctccagtgtcctgtcctac
ttcctcttcctcaagacactccttatgttgaacttcttttcattcctcatcctcctggcc
ttcgtggtggtcctgcaggccgtgtaccccactgcatcagtcagcccccagccattcacg
ggcctcgaggtcctcacaggagcgggctacttcacgcactcgctgctctactacggctac
tacagcaacgtcaccctgaacgacccctgcacctccagtcctgagggcagcgtgtgcccc
ctcgcagcccccctgctcccgtacaacttgccactggcctacctgttcagtgttggggtc
tccttccttgtcacctgcatcctgctggtgtacagcgtgtcccgctcttttcgggagagc
gtgggaagctccacaggggacttggccatcaaagtcttctgtgcctgggacttcaaggtg
atccagaggcgctcggtgaagctgcagtgcgagaacatctgcacccagttgaaggagctg
ctgggggagcagcgctcccgctcccactcccagagccgctgccagtgcctgcggcactgc
gtcgtagtgctgctggcctgggcgctggccctgggctcggtgttgggctgcgtgctggct
gtgcattacttctcagagcacatgcacgtggttcagcaggagcagcaagcgcggggcagt
ggcagatggcagcaagaagccattctgctcgtcctgcccctcgtggtgtccctcctcaat
gccttgatgccgcacctgtacaacttgctggcaatgtgggagaagcaggactccccagtg
acacaggtctacgtggcaatcaccaggaacctcatcctgaagatggtgattctcatcctg
ctgtgctaccactggctcagccggagcgttgtctgctcgacagaggagtgctgggagacg
tgtgtggggcaggacctgtatcgcttcatggtgatggatttcatcttcaccttgctggat
acgctcttcggggagctgatctggaggctaattctggagaagaggctgaagacaaagcag
aggccagagtttgatatcgcccgaaatgtgctggagctgatctatgggcagaccctgacc
tggctgggcgttctcttcgctccgctcctgccagctgtgcagatgctgaagctgctgctg
ctgttctatatcaaaaagagcagcctgatgcggaactgccagtcccccagcaagccctgg
caagcatcacgcatgagcaccgtgttcatcactctgctgtgcttcccctccttcctgggt
gcagctgccttcctctcctacaccatctggtcggtgcagccatcagaaacctgcggtccc
ttccgggggctggaaaccatctacaagtcagggaagaggtgggtgctggtgctggagaag
tccaaccccaacatcacctggtttgcctgggtctaccagcacctgttggagaacacaagc
cccctgttcttcgtgtctgtggccctgatagctgtgatctacttcaacatccaggtggta
agaggccgccagagggtcatctgcctgctccaggagcagattgccaacgagggggaagat
aaggtatttctcattcagaagcttcactccgtttacaggcagagacacaggcgcttctga
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integrated database retrieval system
