Vidua chalybeata (village indigobird): 128797788
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Entry
128797788 CDS
T11587
Symbol
SOX9
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcha03000
]
128797788 (SOX9)
Transcription factors [BR:
vcha03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128797788 (SOX9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128797788
NCBI-ProteinID:
XP_053816643
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All DBs
Position
19:complement(7790569..7794468)
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AA seq
479 aa
AA seq
DB search
MNLLDPFMKMTEEQDKCISDAPSPTMSDDSAGSPCPSGSGSDTENTRPQENTFPKGDPDL
KKENDEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEQEEGAEQTHISPNAIFKALQADSPQSSSSISEVHSPGEHSGQSQGPPTPPTT
PKTDPQPGKQDLKREGRALGEGGRQPPHIDFRDVDIGELSSDVISNIETFDVNEFDQYLP
PNGHPGQPGQVAYTGSYGISGAAGTPAGVWMSKQQPPAQLPALSAEQGPQQQQQQQQQRT
HIKTEQLSPSHYSEQQQHSPQQQQQQQLSYGSFNLQHYSSSYPSISRAQYEYGEHQGSSG
SYYSHAGQGGGLYSTFSYMSPTQRPMYTPIADTAGVPSIPQTHSPQHWEQPVYTQLTRP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgaccctttcatgaaaatgacagaagaacaggacaaatgtatctccgac
gcccccagccccaccatgtcggatgactccgccgggtccccctgcccctctggatccggc
tcggacacggagaacaccagaccccaagagaacaccttccccaagggggacccggacctg
aagaaggagaacgacgaggacaagttcccggtgtgcatccgggaggcggtgagccaggtg
ctgaagggctacgactggaccctggtgccgatgccggtgcgggtgaacggctccagcaag
aacaagccgcacgtcaagagacccatgaacgccttcatggtgtgggcgcaggcggcccgc
aggaagctggcggaccagtacccgcatctgcacaacgccgagctcagcaagaccctgggc
aagctctggaggctgctgaacgagagcgagaagcgcccgttcgtggaggaggccgagcgg
ctgcgggtgcagcacaagaaggaccaccccgactacaagtaccagccccggcggaggaag
tcggtgaagaacgggcaggcggagcaggaggagggcgcggagcagacccacatctccccc
aacgccatcttcaaggcgctgcaggcggactcgccgcagtcctcctccagcatcagcgag
gtgcactcgcccggggagcactcgggccagtcccaggggccccccacgccgcccaccacg
cccaagacggacccgcagccgggcaagcaggacctgaagcgggagggccgcgcgctgggc
gagggcggccggcagccgccgcacatcgacttccgcgacgtggacatcggcgagctgagc
agcgacgtcatctccaacatcgagaccttcgacgtcaacgagttcgaccagtacctgccg
cccaacgggcaccccgggcagcccggccaggtcgcctacacgggcagctacggcatcagc
ggcgccgcgggcacgccggcgggcgtgtggatgtccaagcagcagccgccggcgcagctg
ccggcgctgagcgccgagcagggcccgcagcagcagcagcagcagcagcagcaaaggacg
cacatcaagacggagcagctgagccccagccactacagcgagcagcagcagcactccccg
cagcagcagcagcagcagcagctgagctacggctccttcaacctgcagcactacagctcg
tcctaccccagcatcagccgcgcgcagtacgagtacggcgagcaccagggctcctcgggc
tcctactacagccacgccggccagggcggcgggctctactccaccttcagctacatgagc
cccacgcagcgccccatgtacacccccatcgccgacacggccggcgtgccctccatcccc
cagacccacagcccgcagcactgggagcagcccgtctacacgcagctcacccggccctaa
DBGET
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