Vidua chalybeata (village indigobird): 128797907
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Entry
128797907 CDS
T11587
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128797907 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128797907 (RABGEF1)
Membrane trafficking [BR:
vcha04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128797907 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
128797907 (RABGEF1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
128797907
NCBI-ProteinID:
XP_053816807
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All DBs
Position
20:6179877..6201282
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AA seq
538 aa
AA seq
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MNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRAGAKKAAEEK
TPKQGQLGRERNADNILRDLKEIFTPSWELASPSEALAGKLKEIQEAKAPSPSIHRQASI
ETDRVSKEFIEFIRTYQKPGQDIYKQCKLFLDTMSHKRDLSIEEQSECAQDFYQNVADRL
QTRWKVPPEKVEKAMDEVEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQML
CVPVSEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASAD
DFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQS
LNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGVKQMCKSLDLLSQLNERQERIVSEAKK
LEKDLIDWTDGITKEVEDIVEKYPLEIKPKSQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaatcggagcgcagagggatccacgtggatcagtcggagctgctgtgcaag
aagggctgtggttactatggcaatcctgcctggcaggggttttgctccaagtgctggagg
gaggaataccacaaggccaggcagaagcagatccaagaggattgggagctggcagagcgg
ctccagcgtgaggaggaagaagcctatgccagcagccagagcacccaaggggcacagtcc
ctgaccttctcaaagtttgaggagaagaaaaccaatgagaaaacaagaaaggtcactact
gtgaagaagttcttcactgcttcctccagagcaggagctaagaaggcagctgaagagaaa
acccctaagcaaggacagcttgggagggagagaaatgctgataacattctcagggatttg
aaggagatttttactccctcctgggaactggcttccccttctgaagcgttggctggcaag
ctgaaagagatccaggaggccaaggctcccagcccttccatccacaggcaggccagcatc
gagacagacagagtgtccaaggagttcatagaattcatcaggacctaccagaagcctggc
caggatatctacaagcaatgcaagctcttcttggacaccatgagtcataaaagggattta
agcattgaggaacaatctgagtgtgcccaggacttctaccagaatgtagcagacaggctg
cagacacgctggaaagtgccccctgaaaaagtggagaaggcaatggatgaggttgagaaa
tacatcatgactcgccagtacaaatatgttttttgccctgagacaactgatgatgagaag
aaagaccttgctgtccaaaagaggatcagggctctgcactgggtgactccccagatgctg
tgtgttcctgtcagtgaggaaatcccagaagtctctgacatggttgtaaaggcaattaca
gacatcatcgagatggactccaagcgtgtccctcgggataaactggcctgcatcaccaaa
tgcagcaagcacatcttcaatgccatcaaaatcaccaaaaatgagccggcctctgctgat
gatttcctgcccaccctgatttacatcgtgctgaaggggaaccccccacgcctgcagtcc
aacatccagtacatcactcgcttctgcaaccccagcaggctgatgactggggaggatgga
tattatttcaccaacctgtgctgtgctgtggccttcattgaaaaactggatgctcagtct
ttaaatctgagccaggaggattttgatcgtttcatgacgggccagacctccccaaaaaag
caggaatctgacagcttctcccctgatgtgtgcctgggggtgaagcagatgtgcaaaagc
ttagacctcctctctcagttgaatgagagacaggaaagaatcgtcagtgaggccaagaag
ctggagaaagacctcattgattggactgatggcatcaccaaggaggtggaggatattgtg
gagaaatatcccttagaaatcaaaccaaaaagtcaagccttggcagccattgactctgaa
aacgtggagaatgacaagctgcccccaccactgcagcctcaggtttatgcaggataa
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