Vidua chalybeata (village indigobird): 128797964
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Entry
128797964 CDS
T11587
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04142
Lysosome biogenesis
vcha04144
Endocytosis
vcha05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128797964 (CLTC)
04142 Lysosome biogenesis
128797964 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128797964 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128797964 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcha04147
]
128797964 (CLTC)
Membrane trafficking [BR:
vcha04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
128797964 (CLTC)
Exosome [BR:
vcha04147
]
Exosomal proteins
Proteins found in most exosomes
128797964 (CLTC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
NEW1_HB
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
128797964
NCBI-ProteinID:
XP_053816953
LinkDB
All DBs
Position
20:8736150..8766349
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcatctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacgatggagtctgacaaattcatctgcatc
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaatccggagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattgaaagctgggaaaacgctgcaaatctttaacattgagatgaagagcaagatgaag
gctcacaccatgacagatgatgtcaccttctggaagtggatctctctgaacactgttgcc
ctcgtgacggataatgcagtttaccactggagcatggagggggagtcccagcccgtgaag
atgtttgatcgccactccagccttgctggctgccagatcatcaactacagaactgatgcc
aagcagaaatggctcttgctgactggaatatctgcacagcaaaaccgtgtcgtgggagca
atgcagctgtactctgtggacagaaaagtgtcccagcccatcgagggacatgcagccagc
tttgcacagttcaagatggaagggaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagctgcatatcattgaggttggcacaccacccactgggaat
cagccctttccaaagaaagctgtggatgtcttctttcctcctgaagcacaaagtgacttt
cctgttgctatgcagatcagtgacaagcacgatgtggtgttcctcataacaaagtatggc
tacatccacttgtatgacctggaaactggcacctgtatctacatgaacaggatcagtgga
gagaccatttttgttactgcacagcacgaagcaacagctggaattattggagtcaacaga
aagggacaagtgctctcagtgtgtgtggaagaggagaacatcattccctacatcacaaac
gtgctgcagaatcctgacctggctttacggatggctgtccgcaacaacctggcaggggcc
gaggagctctttgccaggaaattcaatgcactctttgcacaagggaactactcagaggca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgtcgg
ttccagagtgttccagctcagccagggcagacttcccctctcctgcagtattttggcatt
ctgctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtgctc
caacagggccgcaagcagctcttggaaaaatggctaaaagaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtggatcctacactagcacttagtgtctatctg
agagccaacgttccaaacaaggtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagatataacacagattgtggatgtctttatggaatataatttaatccag
caatgtacagcctttctgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcacgcgcctcaggttgcagatgccatcctg
ggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaggct
ggtttgctgcagagagcactcgagcacttcacagacttgtacgacatcaagcgcgcggta
gttcacactcacctcctcaaccctgagtggttagtgaattattttgggtccttatcagta
gaagactctctggagtgtctgcgtgcgatgctgtccgctaacatccgtcagaacctgcag
atctgtgtccaggtagcttccaaataccacgagcagctgtcaacacagtcactcattgag
ctctttgagtccttcaagagctttgaaggtttgttttatttcctgggctccattgtaaac
ttcagccaggatccagatgtgcacttcaagtacattcaagctgcatgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagctgcctctcatcattgtgtgtgaccgc
tttgactttgtccacgacttggtgctgtatttgtatagaaataatctccaaaaatatatt
gagatttatgtacagaaggtgaatccaagccgtctgccagttgttattgggggactgctt
gatgtggattgctctgaagacgtgatcaagaacctcatccttgtagtgagaggtcaattt
tcaactgatgaacttgttgcagaagttgagaaaagaaacaggctgaagctgcttctgccc
tggctggaagcaagaattcacgagggctgtgaggagcctgccactcacaatgcactggcc
aagatatacattgacagcaacaacaacccagagaggttcctgcgtgagaatccctactat
gacagtcgtgttgttggcaagtactgtgagaagagggaccctcacctggcctgcgtggct
tacgagcgtggacagtgcgatctggagctgattaatgtgtgcaatgagaactccctcttc
aagagtctctcccgctacttagttcgtcgtaaggaccccgagctctgggccagtgtgcta
ctggaaagcaacccctacagaagacccctgattgaccaggttgtccagactgcgctgtca
gagacccaggaccccgaggaagtctctgtcactgtgaaggccttcatgactgcagatctt
cccaatgagctcattgaactgctggagaaaatcgttctggataattcagtgttcagtgag
cacaggaatctgcagaaccttctcatccttacagctatcaaggctgaccgcacccgtgtc
atggagtacatcaatcgcctggataactatgatgcccctgacatagccaatattgctatc
agcaatgagctttttgaggaggcatttgctatcttcaggaagtttgatgtcaacacatca
gctgtacaggtgttgatagagcacattgggaacctggaccgtgcgtacgagttcgccgag
cgctgcaacgaacctgcagtgtggagccagctggccaaagcacagctccagaaggggatg
gtaaaggaagcaattgactcctacattaaagcagatgatccttcctcatacatggaagtt
gttcaagctgctaatgccagtggaaactgggaagaactggtgaagtatctgcagatggca
cgcaagaaggcccgagagtcgtatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgcctggcagagctagaggagttcatcaatggccccaacaatgcacacatccagcag
gttggtgatcgctgctatgatgagaagatgtacgaagcagccaagctcttgtacaacaac
gtgtccaacttcggccgtttggcctcaaccttggtgcacctcggcgaataccaggcagcc
gtggatggtgctcggaaagccaacagcactcgcacgtggaaggaggtctgctttgcttgt
gtggatggaaaagaattccgcctggctcagatgtgtggcctccatattgtagtgcatgca
gatgagctggaagagctaatcaactattaccaggatcgtgggtactttgaagagctgatc
actatgttggaagcagcacttgggctggagcgagcacacatggggatgttcacagagctg
gcaattctctactccaagttcaagccacagaagatgagggagcacttggagctgttctgg
tccagagtcaacattcccaaggttctgagagctgcagagcaagcccatctctgggctgaa
ctggtgttcctgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggccagttcaaagatatcatcactaaggtggccaat
gtggagctgtactacaaggcagttcagttctatttggaatttaagcctctgctgctcaat
gatctgctgatggtgttgtctcctcggcttgaccacactcgtgctgtcaccttcttcaca
aaggttaaacagctgcccctggttaagccttacctgcgctctgttcaaaatcacaacaac
aaatcagtcaatgagtccctcaacaacctcttcattattgaagaagattaccaggctctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgcccaacgtttggag
aaacacgagctaatagagttccgaaggatcgctgcctatctcttcaaaggcaacaaccgc
tggaaacagagcgtggagctctgtaagaaggacaggctctacaaggatgccatgcagtac
gcttccgaatccaaagatactgagctggcagaagagctgctgcagtggttcttgcaggag
aacaagagggaatgctttggtgcttgtctcttcacctgctacgatctcctaaggccggat
gttgtcttggaaacagcgtggaggcacaacattatggactttgccatgccatactttatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtctttgagaaaggaagaggagcaagctacagaaacacaacctattgtt
tatggccagccccagctgatgctgacagcgggacccagcgtggcggttcctccgcaggca
cctttcggctacggctacacggcccctccgtacgggcagccgcagcccggcttcggctac
agcatgtga
DBGET
integrated database retrieval system
