Vidua chalybeata (village indigobird): 128797966
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Entry
128797966 CDS
T11587
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128797966 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcha04040
]
128797966 (TRPV1)
Ion channels [BR:
vcha04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128797966 (TRPV1)
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Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
YVC1_C
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128797966
NCBI-ProteinID:
XP_053816968
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Position
20:8025515..8037615
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AA seq
844 aa
AA seq
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MSSILGKMKKFGSFDMEESEVTDEHTDGEDSVQETPDNPQGPLSSRVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFCQMDHLMAPSVIKFHVNLERGKLHKLLSTDSITGCSEKAFRFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANITAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHITILTAAAYYRPVHKNEKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQETNISDYARCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNL
SFSIKPGRVSGKHWKTLVPLLKDGEKRREEPHKPPEEVKLKPVLEPYFEPEDSEELKESI
PKSA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttgggaagatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacacggatggggaggactctgtccaggagacccctgacaacccccag
ggccccctcagctccagggtgcagccacccaaaagcaacatttttgcaagacggggtcgc
tttgtgatgggggatagtgacaaggacatggctcccatggactccttctgccagatggat
cacctgatggcaccttctgtcatcaaattccatgtgaatttggagaggggcaaacttcac
aagctcctctctacagattccatcacaggctgctcagaaaaagctttcagattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctacta
ctctaccttaatagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
ggcaaaacctgtttactgaaagccatgctgaatctacatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagaa
tatactgacaactactacaagggccagactgctcttcacattgccatcgagaggaggaac
atgtacctggtgaaactcctggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacatcactgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtaaccaagatgtataataacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgggagatcaaagaccctgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaat
tcagtgcttgagatccttgcctacagcagtgagacaccaaaccgtcacgagatgctgctg
gtggaaccccttaacaggctgctgcaagacaagtgggaccgctttgtcaagcacttgttt
tacttcaacttctttgtctacaccatgcacatcaccatccttactgcagctgcttactac
agacctgtacacaagaatgaaaagcctcccttcacctttggttacagcactggggaatat
tttcgagtaactggagagatcctgagtgtactgggaggcctctatttttttttcagaggg
atccagtatttcgtgcagaggcgcccatcactcaggacactgatagttgatggctacagt
gaggttcttttctttgtccactccctgctcctgctgagctctgtggtgctgtacttctgt
ggccaggagctctacgtggcttccatggtgttctccttggccctgggctgggccaacatg
ctctactacacccggggcttccagcagatgggaatttactccgtcatgatcgccaagatg
atccttagagatttgtgtcgcttcatgtttgtctatctcgtattcctcttgggattttct
acagctgtggtgactttgattgaagatgacaacgaggggcaggaaacaaatatctctgac
tatgccaggtgctgccacgtgaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagagaattac
aggttcaagtctgtgtttgtcatcctgctggtgctctatgtcatcctcacctacatcctc
ctgctcaacatgctcattgcactgatgggggagactgtcaacaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcctggacattgagaacagctacttg
aactgtctgaggcactcgttccgctctgggaagcaagtcctggtggggatcacacctgat
ggccaagatgattacaggtggtgcttcagggttgatgaagtgaactggtccacgtggaac
actaatctgggcatcatcaacgaagaccctgggtactctggggacctcagacgaaatctc
agtttctccattaagcctggcagagtttcagggaagcactggaaaacattggttccactt
ctaaaagatggagagaagaggagagaagaacctcacaagccaccagaagaagtcaaatta
aaacctgttttggaaccttattttgagccagaagattctgaggaattgaaagagtcaatt
ccaaagtcagcctaa
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