Vidua chalybeata (village indigobird): 128798015
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Entry
128798015 CDS
T11587
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03030
DNA replication
vcha03410
Base excision repair
vcha03420
Nucleotide excision repair
vcha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128798015 (RFC2)
03410 Base excision repair
128798015 (RFC2)
03420 Nucleotide excision repair
128798015 (RFC2)
03430 Mismatch repair
128798015 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcha03032
]
128798015 (RFC2)
03036 Chromosome and associated proteins [BR:
vcha03036
]
128798015 (RFC2)
03400 DNA repair and recombination proteins [BR:
vcha03400
]
128798015 (RFC2)
DNA replication proteins [BR:
vcha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128798015 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
128798015 (RFC2)
Chromosome and associated proteins [BR:
vcha03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128798015 (RFC2)
DNA repair and recombination proteins [BR:
vcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128798015 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
128798015 (RFC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_lid_RFC1
nSTAND_NTPase5
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
Rad17
AAA_11
RuvB_N
AAA_assoc_2
nSTAND3
AAA_19
DNAX_ATPase_lid
AAA_24
MipZ
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_25
AAA_23
AAA_30
NTPase_1
SLFN-g3_helicase
MeaB
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
128798015
NCBI-ProteinID:
XP_053817100
LinkDB
All DBs
Position
20:3612615..3620471
Genome browser
AA seq
356 aa
AA seq
DB search
MEVDMAEDEKAGPSAGEKRGPTDPAGAVPGGGGGHYELPWVEKYRPMKLSEIVGNEDTVS
RLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRN
KIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKII
EPIQSRCAVLRYTKLTDAQILARLLKIVEKEDVAYTDDGLEAIIFTAQGDMRQALNNLQS
TYSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGN
IFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatatggcggaggacgagaaggccgggccgtcggcaggcgagaagcgggga
cccaccgaccctgcaggggccgtgcccggcggcggcggcggccactacgaactgccctgg
gtggaaaaatacagacccatgaaactgtccgaaatagttggaaatgaagatactgtgagc
aggttggaggtctttgcaaaagaggggaatgtaccaaatattataattgctggtcctcca
ggaacaggtaaaaccaccagtatcctgtgtttggctcgtgctctgcttggtcctgcatta
aaggatgctgttctggagctgaatgcctcaaatgacagaggcattgatgttgtaagaaac
aaaatcaaaatgtttgctcagcaaaaggtcacacttccaaaaggtcggcataaaataatc
atccttgatgaagcagacagcatgacagatggagcacagcaagcattgagaagaacaatg
gaaatttattccaaaacaacacgcttcgcactggcctgcaatgcctctgacaaaatcata
gaacctattcagtctcggtgtgcagtgctgcgttacaccaagctgacagatgcacaaata
cttgccaggctactgaaaattgttgagaaagaggatgtagcatatacagatgatggacta
gaagccattatcttcacagcccaaggtgatatgagacaggcattaaacaacttacagtcc
acatactctggatttggctttataaacagtgaaaatgtctttaaggtatgtgatgagcct
catcctctgctggtgaaggaaatgatacaacactgcataaatgcaaatattgatgaagca
tacaagattcttgcccacctgtggcgccttggatactctccagaagatgtcattggcaat
atcttccgtgtgtgtaagacctttcaaatgccagaatatctgaaactggaatttatcaag
gaaattgggtacacccacatgaagatagcagaaggtgtgaactcccttttacaaatggct
gggctgctggcccggctgtgccagaagactgcagcccctgcagccagttag
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