Vidua chalybeata (village indigobird): 128798017
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Entry
128798017 CDS
T11587
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128798017 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcha01009
]
128798017 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcha03036
]
128798017 (NCOR1)
Protein phosphatases and associated proteins [BR:
vcha01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128798017 (NCOR1)
Chromosome and associated proteins [BR:
vcha03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
128798017 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
NCOR1_N
Myb_DNA-bind_6
DUF7952
Motif
Other DBs
NCBI-GeneID:
128798017
NCBI-ProteinID:
XP_053817103
LinkDB
All DBs
Position
20:complement(7828177..7884735)
Genome browser
AA seq
2533 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDSH
FQRVSAATVLPLVHPLQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKLSK
EELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQI
IYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNH
ARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQER
FQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFI
NMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLYY
YLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKSDKSEKKEEEKKDEE
EKDEKEESKENTKEKDKTEVAPEETEEREQAAPRGRKTANSQGRRKGRITRSMTNEAAQA
NAAAAAATEEPPPPLPPPPEPSSTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGT
KSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIEA
SNEEENPEDSEGAENSSDTESAPSPTPAEPAKPTEETPSEPAAPKVTTEAPAEQESAIKP
AASTSPSLPALSVTTAETQNPEPQVKEEINTEAEEPMEVDSRSHSAEAKPVITLPVHTKV
EPVETEMRLPENIQVKIESDTKEREMEKPKEKSEPEEMDYSLSQQVTTARPESHSDNDSS
ATCSADEEVDGEPDRQGIFSRESKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIPPM
VSCSPCSVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSAVSPCGTSKSP
SVEWEGKPVAYMPYAEVKRIEQEAQVQNPATRSASPYRLSPREVNKASPQPEMNAARYSV
PPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTPG
TYLTSHSQASYAPETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEGLL
VRAQHESVVRGTTTIQEGSITRGTPTNKVSVETIPSLRGSITQGTPALSQSGIAADALLK
GTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDAIKNVREGTRSPRTAHEIGLK
RTYDTMEGNIKQGMSLRESPGSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRAT
AESFEEGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQES
RKTPEIVQTTRPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEMVP
ENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNARRT
PVNYQSPMSRSSPMMNRVSEAGVSSGKSANHDRKNTLTPTQRESVPAKSPVPGVDPVVAH
SPFDPHHRGATPEVYRGHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYA
MENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILVP
HPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAEREREREREKE
RERERERERERERERERERERITSVPAELYLRPGAEQPGRPGSHGYVRSPSPSVRSQENI
LQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALVDA
AASAPQMEVAKAKENKHEGTRIEENMGRRSAVVTDQQQMEQKTLEVEKRPVQCPYTSANY
SGGKSQAQTSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKD
ARDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPVPAQEKLQPYQQETPKPSQAETDP
NRPYEGPIHRYRTQQEPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFARN
QASSQASLQPPTTTFQNSTPAPTPVSGRAKTSNRYSPEAQPQPVHHQRPGARVSPENLSD
KARGRPGKSPERSHVPSEPYEPISPPQVPVVHEKQENVLLLSQRTEPTEQRTDSRSPGSI
SYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSGAVS
SRGHSFGDPASNLGLEDIIRKALMGNFDDKSEEHGVVMSQPLAVVPGSSGAAVPATNETR
REEANPSPNSGGAVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQTP
VWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHPQNRIWEREPAPL
LSAQYETLSDSDD
NT seq
7602 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctccgaaccaaggagctttcagcacggagcagagccggtac
ccgccccactctgtgcagtacaccttccccagcacccgccaccagcaggaatttgccgtt
cccgactatcgctcgtcccacctggaggtcagccaggccacgcagctcctgcagcagcag
cagcagcagcagcagctccggcgcaggccctcgctgctctccgagttccacccaggctct
gacaggcctcaggaaaggagaactggatatgaacagcagttccatccaggtccatctcag
acggatcatgattcactggaatcgaagcgaccacgtcttgagcaagtgtctgattcccat
ttccagcgtgtcagtgcagccactgtcttgcctttagtgcatcctctgcaggaagggttg
aggtctgcagatattaagaaggacccagcttttggaggaaagcatgagggaccatcttct
ccaatttctggtcagccttgtggggaggaccaaaatgcttcaccttccaagctgtcaaag
gaagaattgatacagagcatggaccgcgtagatcgtgaaattgcaaaagtggaacagcaa
atcctgaaactgaagaaaaagcaacaacaacttgaagaagaagctgctaagcctcccgag
ccggagaggccggtgtcccctcctcccgtggagcagaagcaccgcagcatcgtccagatc
atttacgatgagaatcggaaaaaagcagaagaagctcacaagatttttgaaggtcttggt
ccaaaagttgaattgccactttacaaccaaccctcagacaccaaggtctaccatgaaaac
atcaaaacaaaccaggtgatgaggaaaaagctgatcctattctttaaaagaaggaaccat
gcaagaaaacaacgggaacagaaaatctgtcaacgttatgatcagctgatggaggcatgg
gagaagaaagtggacaggatagaaaataatccacgcaggaaagccaaggagagcaaaaca
cgggagtactatgagaaacaattcccagaaatcaggaagcagagagaacagcaagaaaga
ttccaaagagttggccaaagaggcgctggcctttcagcaaccattgccagaagtgaacac
gagatttcagaaatcatcgatgggctctctgagcaggagaataatgagaagcaaatgcgc
cagctctctgtcatccctcccatgatgttcgatgcagagcagagaagggtgaagttcatc
aacatgaacgggctgatggaggatcccatgaaagtttataaagacaggcagttcatgaat
gtctggacagaccacgagaaggagatttttaaggaaaagtttgtccaacatcccaagaat
tttggtctaattgcttcctacttggaacgaaagaatgttcctgactgtgtattatattat
tatttgaccaagaaaaatgaaaattataaagcccttgtgcgaaggaattatggcaaacgc
agaggaagaaaccagcaacagattgctcgtccttctcaagaagaaaaggtagaagaaaag
gtagaagaggaaaaatcagacaaatcagaaaaaaaagaggaggaaaagaaagatgaggag
gagaaggatgagaaggaggaatctaaagagaataccaaagaaaaggacaaaactgaagtt
gcaccagaggaaacagaggaaagggagcaggcagctcctcggggccgaaaaaccgccaac
agccaaggtcggcgtaagggcagaatcaccagatcaatgacaaatgaagctgcacaagca
aatgctgctgcagctgcagccactgaagagccaccaccacctctgccacccccaccagaa
ccttcttctacagagcctgtggagacatcccgctggacagaagaagaaatggaagttgct
aagaaaggtctagtggaacacgggcgaaactgggcagcgattgccaaaatggttgggaca
aaaagtgaagctcagtgtaagaacttctacttcaactacaaaaggagacacaacctggac
agtctcctccaacagcacaaacagaagtcttcgcgaaggccccgagaggagcgagatgtg
tcacagtgtgagagcgtggcttccactgtgtcagctcaggaggatgaagatattgaagca
tctaatgaagaagagaacccagaagacagtgaaggtgctgaaaatagttctgatacagaa
agtgctccatctccaactccagcagaacctgctaaaccaactgaagaaactccatctgag
cctgctgctccaaaagtaaccactgaggccccagcagagcaggaatctgccataaaacct
gcagccagcacatctccctccttaccagccctaagtgtaacaacagctgaaactcagaac
cctgagccacaggtcaaggaagaaataaacactgaggctgaagagcctatggaggtggac
agtagaagccattcagctgaagctaagcctgtgattactcttccagttcataccaaagta
gaacctgtagagactgaaatgaggctaccagagaatattcaagtgaaaatagagagtgat
accaaagagagagagatggagaaacccaaggaaaagtcagaaccagaggaaatggactac
agcctgtcccagcaagttactacagccaggccagaatcccattcagataatgactccagt
gccacctgcagtgctgatgaggaagttgatggagaacctgacaggcagggtatcttcagc
agagagtcaaagccctccctgttaaatcccactgggtcaattctggtgtcatccacaata
aagcaagggcagatggacctgcagcagcttcaccaccgagctgctgtcatcccacctatg
gtttcctgcagcccctgctctgtccccgtgggcaccccagtgagtggttatgccctctac
cagcggcacatcaaggccatgcacgagtcagccctgctggaggagcagcggcagcgccag
gagcagctggacatggaatatcggagcgctgtgagcccctgtggcacttccaagagcccc
agtgtggagtgggaaggaaaacccgtggcctatatgccttatgctgaggtcaagagaata
gaacaggaagcacaagtgcaaaatccagccacaaggtcagcatcaccctacaggttatct
ccaagagaagtcaataaagcctctccccagcctgagatgaatgcagctcgctacagtgtc
cctccagttctccagccagcccctcaccaggtgataaccaatattcctgaaggagttcgc
ctgcccacaaccagacccaccagaccaccaccacctctcattccatcctccaaaaccagt
gtgccatcagaaaaaccttccttcatcatgggaggctcaatctcacaaggaacacctggc
acttatttaacatcccacagtcaagcttcctatgccccagaaactgcaaagccatcagtg
ggttctatatcccttgggctgccaaggcagcaagagtcggccaaatctgcttctctgccc
tatatcaaacaagaagaattctcacccagaagccagaattcccaacctgagggactcctg
gtcagggcacaacatgaaagtgtggtgcgaggtaccacaacaatacaggaggggagtata
acacgaggaactccaaccaataaagtttccgttgagaccattccttctttgagaggctcc
ataactcagggtaccccagctctgtcccagtccggcatcgccgccgatgcgctgctgaag
ggaaccatcacccgcctggccaccgaggacagcagcccagagaagtgcagggaggaggcc
tcagccaagggccatgtcatttatgaaggcaaaagtgggcatattctatcttatgatgct
attaaaaatgtccgtgaaggaacaaggagtccaagaactgctcatgaaattggcttaaag
agaacctatgatacaatggaaggaaatataaagcaggggatgtcactgagggagtctcca
gggtctgcaccactggaaggtttaatctgccgagcgctgcctcggggtagcccacatgct
gaactaaaggagagaacagtcttgtctggctctataatgcaaggcacaccaagagcaaca
gctgaaagttttgaggaaggtttgaagtatcccaagcagatcaagagagagtcacctccc
atcaggacgtttgaaggagccatcaccaagggcaaaccctacgatggggtgaccaccata
aaggagatgggtcgctccatccatgagatcccaaggcaggacctcttaagccaagagagt
cgcaagactcctgaaatagtgcagacaaccaggccaatcatagaaggctccatatctcag
ggcacacccataaaatatgaaagcaactctggccagtctgccatcaaacacaatgtaaaa
tctttaatcactggaccaagcaagctgccccggggaatgcctcagctggaaatggtgcca
gaaaacgtgaaggtggtggagcgaggaaaatacgaagatgtgaagaccggggatgccgtg
cggtcccgtcacacgtccgtagtcagctctggtccctctgttctcaggtcaacccttcat
gaaactcccaaatcacagctgagccctgggatttatgatgatacaaatgctcggaggaca
cctgtgaactatcagagtccaatgtccaggagttcacctatgatgaatagagttagtgag
gctggagtatcttctgggaagtcagcaaatcatgacaggaagaacacactcactccaaca
cagagggagagtgtgccagcaaaatctccagtcccaggggttgatcctgtagtggctcac
agtccttttgaccctcaccacagaggagcaactcctgaagtctacaggggtcacctccct
ccccatttagatcctgctatgccatttcacagggctctggatcctgctgctgctgcttac
ctgttccaaaggcagctgtcccccacgccggggtaccccagccagtaccagctgtacgcc
atggagaacacgcgccagaccatcctcaacgactacatcacctcccagcagatgcaagtg
aacctcaggcccgatgtcaccaggggattgtcccccagggagcaaactttagcactccct
tatgcaggagcacgaggaattattgacctgaacaatatggcccccactatcttagtgcct
catcctggaggaaccagcaccccacccatggagagaatcacatacatccctggcacccag
cttaccttccctcccaggccttacaaccctgcttctctgtcaccaggacaccccacccac
ctggcagcttctgcagctgcaaatgctgaaagggaacgggaaagggaaagggagaaggaa
cgggaaagggagagggaacgtgaacgagagcgggaaagagaacgagaacgagagagggaa
agaatcacctcagtccctgctgaactttatctccgaccaggtgcagaacagcctggcaga
cccggcagtcacggatacgtccggtccccatccccctctgtcagaagccaggaaaacatt
ctgcagcaaaggccaagtatattccaaggaaccaatgggacaagcgtaatcacacctttg
gatcctgctgctcagctacgtatcatgcagctcacccctggagctccctctatcactcaa
ggcttgccagcttcccgttacaacactgctgctgatgccctggcagcactcgtggatgct
gcagcctctgctcctcagatggaagttgccaaagcaaaggagaacaagcacgaaggaacc
aggatagaagagaacatgggacgccggtcagctgtggtgactgaccagcagcagatggag
cagaagaccctggaggtagaaaagaggcctgtgcagtgcccctatacatctgcaaattac
tctggtggcaagtcccaggcacagacttcatcagtagtctattcagaggctggtaaagag
aaaggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaagaccaca
attactgctgctaacttcatagatgtgatcatcactcgccagattgcttcagacaaggat
gctcgagataggggctctcaaagttcagattcttccagtagtttgtcctcacaccggtat
gaagctcctggagatgccattgaggtgatcagccctgcaaattcacctgtacctgctcaa
gaaaagctgcagccctatcaacaagagacacccaaaccaagccaggcagagactgacccc
aacaggccgtacgagggccccattcaccgctacaggacacaacaggagcccccctcaccc
cagcaacctccacctccctcttcccaggcagaggggatggcacacgtgcccaggacccat
cggctcatcacccttgctgatcacatctgtcaaattatcacacaagactttgctagaaac
caagcatcttctcaggcctctttgcagcctcccaccactacattccagaattccacccct
gctccaacgcctgtttctggccgggcaaagacctcgaaccgctacagccccgaggcgcag
ccacagcccgtgcaccaccagcggccaggggccagagtgtcccctgagaacctctctgac
aaggccaggggaaggcctggaaaatctccagagaggagtcatgtcccctcagagccctac
gagccaatctcaccacctcaggtcccagttgtacatgagaaacaggaaaatgttcttttg
ctttcccaaagaactgagcctactgaacagaggactgactctcgctctccaggcagtatc
agttacctgccttcgtttttcaccaaacttgagaacacttcaccaatggtaaaatccaag
aaacaggagatatttcgaaagctgaactcatctggtggaggtgactctgacatggcaact
gctcagccagggactgaaatattcaatttgccagcagtcactacctcaggtgcagtcagt
tctaggggtcactcctttggagatcctgccagtaatctgggtctggaagacattattagg
aaagcactgatgggaaactttgatgacaagagtgaggagcacggggtcgtcatgtcccag
cctcttgcggtggttccgggcagctccggcgccgcggtaccggcgactaacgagacacgt
agggaagaagccaatccatctccaaattcaggtggggcggtcagcaagcagaagctcatc
ggcaagtcaaacagtaggaagtcaaagtctccaattcctgggcagggatatttgggaact
gaaagaccttcttctgtctcatctgtacactcagaaggggactaccacagacagactcca
gtgtgggcctgggaagacaggccttcatcaacaggttccacccagtttccatacaaccct
ctgaccatgaggatgctgagcagcacccccccaacctccatcgcctgtgcccccccgtcc
atgagccaagcaaccactcacccacagaacaggatctgggagcgagagcctgcaccactg
ctttcagcacaatatgagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
