Vidua chalybeata (village indigobird): 128798028
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Entry
128798028 CDS
T11587
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128798028 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcha02000
]
128798028 (SLC6A4)
Transporters [BR:
vcha02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128798028 (SLC6A4)
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Motif
Pfam:
SNF
5HT_transport_N
PRONE
MPSS1_C
Motif
Other DBs
NCBI-GeneID:
128798028
NCBI-ProteinID:
XP_053817136
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Position
20:complement(7527241..7547875)
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AA seq
668 aa
AA seq
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MEKKTTGNETEPLTSKKDVSDCSKGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKGE
AAQISNGFSGVQSSVPCNGEVEDAQGTAPAATTTTTTTTSTTCGAEAQQQLMELEDRETW
SKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMALFGGIPLFYMELALGQY
HRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTAELPWTSCTN
PWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLLLI
FTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLMRGATLPGAWRGVLYYLKPNWQKLLA
TEVWVDAAAQIFFSLGPGFGVLLAYSSYNKFHNNCYQDALITSTVNCLTSFVSGFVIFTV
LGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAG
LEGVITGVLDEFPHVWGKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPAVL
TVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPLFLLFVTCSFLSNPPE
LRLFDYDYPYWTTVVGYCIGTSSIIFIPIYMVYRLVITPGTLKERILKSITPETATEIPF
GDIRMNAI
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaccacaggcaatgagacagagcccctgacttccaagaaagatgtctca
gactgtagcaaaggagaagattgtaaagagaatggacttctggtcaggaaccctaaatct
gccctacggctggtggaggatggcaacaaagtccacccgagccagggggataaaggggag
gcagctcagatctcgaatggtttttcaggggttcagagctcagttccctgcaatggagag
gtggaggatgcccagggcacggccccagcagccaccaccaccaccaccaccaccacgtcc
accacctgtggggctgaggctcagcagcagctgatggagctggaggacagggagacctgg
agtaaaaaaattgactttctcctctccgtcattggatacgcagtggatctgggaaatgtg
tggagatttccttatatctgctatcagaatggaggaggagctttcctcattccttacaca
atcatggccctctttggagggattcctctcttctatatggaattagcactaggacaatac
cacaggaatggctgcatttccatttggagaaaaatatgtcctatattcaaaggaattgga
tttgccatctgtatcatagatctttacgtagcctcctactacaacaccatcatggcttgg
gctttttactacctcatctcctccttcacggcggagctgccctggaccagctgcacaaac
ccctggaacacaggaaactgcaccaactacttcagcaaggacaatgtcagctggtccctg
cactccatctctcctgcagaagaattttatacccgccaggtgctgcaggtgcacaggtcc
aatgggctggatgacctggggggcattagctggcagctgaccctctgcttgctgctaatc
ttcaccattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggtttgg
gtgactgccacgttcccttacatcatcctcttcatcctgctcatgagaggtgcaactttg
cctggggcttggagaggtgtcctctattacttgaaacctaactggcagaaactcctggcc
actgaggtttgggtggatgcagcagctcagatttttttctccctgggaccaggttttggg
gtcctgttggcttattccagctacaacaaattccacaacaactgctaccaagatgctctg
atcaccagcaccgtgaactgcttgaccagctttgtgtctgggtttgtcatcttcaccgtg
ctggggtacatggctgagatgaggaatgaagatgtctcagaggttgccaaagacactgga
cccagcctgctcttcatcacctacgcagaggccattgccaacatgccagcttccaccttc
tttgccatcatcttcttcctcatgctgctcacgctggggttggacagcacgtttgcagga
ctagagggagtgattactggagtcctggatgaattcccacacgtctggggcaaacgcagg
gaattgtttgtccttggtctgaccatcgtttgctttttggggtcgctggcaaccctgaca
tttggaggagcatatgtggtgaagctgtttgaggaatacgccacgggtccagctgtcctg
accgtcgtgttcctggaggcagtggccgtgtcctggttctatggcatcacccagttttgc
aacgatgtgaaagaaatgctgggctctgccccaggctggtactggcgagtttgctgggtt
gcaattagtccccttttccttctgtttgtcacttgcagctttctgtccaaccctcctgag
ctgaggctttttgattatgattatccctactggaccacagttgtgggttactgcatagga
acctcctccatcatcttcattcccatctacatggtctatcgcttggtcatcaccccaggg
acacttaaggagcgtattctaaaaagcattactccagaaacagctacagaaattcccttt
ggagacatccgcatgaacgccatataa
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