Vidua chalybeata (village indigobird): 128798197
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Entry
128798197 CDS
T11587
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcha03021
]
128798197 (SUPT6H)
03036 Chromosome and associated proteins [BR:
vcha03036
]
128798197 (SUPT6H)
Transcription machinery [BR:
vcha03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
128798197 (SUPT6H)
Chromosome and associated proteins [BR:
vcha03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
128798197 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
128798197
NCBI-ProteinID:
XP_053817462
LinkDB
All DBs
Position
20:7005291..7031265
Genome browser
AA seq
1722 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEETEGETRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKNAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSFSRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYILKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
TYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSTQSQAQQPSSSSRQRQQPKTNSHAAIDWGKMAEQWLQE
KEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggagagcgaagcagaggagtcagaggaagagtacaaccaggatggg
gaggttgtacccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggagctgaaccttgatgatcaggatgagcaggggaacctgaaaggattcattaacgat
gatgatgatgaggaagaggaggaggaagccagtgactctggagactccgaggatgatgtt
ggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgactttgacctc
attgaagaaaacttgggtgttaaagtcaaaagacaaaaattcaggcgtgtgcgaaaaatg
tctgatgatgaggacgatgaagcagaagattatggaaaggaagaacatgagaaggaagcc
attgctgaagaaatctttcaggatggtgaaggcgaggaaggaggggaagctgtggaagct
cctgttgctccacaggaagaggaagaggaggaggaggaagatgaatctgacattgatgac
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggagaaagaagcttcca
ggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggactttgactac
gatgagtttgagaagtacaacgagtacgatgaggagatggaggaggagtacgagtacgag
gacgaggaaaccgaaggggagacgcgcgtgcggcccaaaaagaccaccaagaaacgcgtc
agtcgccgcagcatcttcgagatgtacgagcccagtgagctggagagcagccacctcaca
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagctgagatccatc
ccagtgaagaatgctgaagatgatgagctggaggaagaagctgactggatttataggaat
gcatttgcaacacccaccatctccttgcaggaaagttctgactaccttgaccgtggacaa
gccagcagcttcagccgcaaggggcccagcaccatccagaagatcaaagaagccctgaat
ttcatgagaaatcagcattttgaggtcccgttcatcgccttctacagaaaggagtatgtg
gagccagagctgcacatcaacgacctgtggagggtctggcagtgggatgagaagtggacc
cagctgaagatccgcaagcagaacctgactcgactgtttgagaagatgcaggcctaccag
tatgagcaaatctctgctgacccagacaagcccttggctgatggaataagggccctggat
actactgacatggagaggctgaaggacgtgcagtccatggatgagctgaaggacgtgtac
aatcacttcctgctgtactatggcagagacatccccaagatgcagaatgctgccaaggct
gctcgcaaaaagcaaaagcgtatccgggaggatggtgaagaagaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccgaagggatatg
tacaccatctgccaggcagctgggctggatggcttggctaagaaatttggtctgacacct
gagcagtttggagagaatctccgagacagttaccagcgtcacgagacagagcagttccct
gcagagcccctggagctggccaaggattatgtgtgtagtcaattcccaagcccggaagca
gtgctggaaggagctcggtacatggtggctttgcagatcgccagggagcccttggtcaga
caagtcctgagacaaactttccaagaacgagctaaaatcaacatttcaccaaccaaaaag
gggaagaaggatattgatgaagcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgagagatgaccaattcctgaaaatgagcctggcagaggatgaggca
ctgctcaccatagatatcagcattgacatgaaaggagtggagggttatggcagtgaccag
acgtactttgaggaaatcaagcagttctactaccgggacgagttcagtcaccaggtgcag
gagtggaatcggcagcgcaccatggccatcgagcgctccctcaaccagttcctctacgtg
cagatggccaaagaattgaagaacaagctcttagtggaggccaaggagtacatcctcaag
gcttgcagccgcaaactttacaactggctgaaggttgctgcctacaggccagatcagcag
gtggaggaagacgatgatttcatggatgagaaccaagggaaggggatccgcgtgctgggc
attgccttttcatcagccagggaccaccctgtgttttgtgccctcgttaatggagagggt
gaggtgacagatttcctccgactgccacatttcacaaagagaaggaatgcctggcgtgag
gaggagagggaaaagaaggcccaggatattgaaacattgaaaaaattcctcctgaacaag
aagcctcatgtggtgacaattgcaggcgagaacagggatgctcaaatgctgatggaggat
gtaaagagaattgttcatgagctggaccaagggcagcagctgtcctctatcggagtggag
ctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaatgaattc
cgggattacccccctctgctgcgtcaggccgtgtccctcgctcgccgcatccaggacccc
ctcatagagtttgcccaggtctgcagctctgatgaggatattctctgcctgaaattccac
cctctgcaggagcacgtggtgaaggaggagctgctgaacgcgctctactgcgaattcatc
aaccgtgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccag
gctttgctgcagtacgtgtgtggcctgggaccacgcaaaggcactcacctgctgaagatc
ttaaaacaaaacaacacccgtctggagaacaggacccagctggttacgatgtgtcacatg
ggacccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcatcactgggt
gatagcactgattcctacattgaagtcctagatggctctagggtccatcctgaaacctat
gaatgggccaggaaaatggcagtggatgccctggaatatgatgagtcagctgaggatgca
aatcctgcaggagctctggaggagatcctggaaaaccccgagcgcctgaaagacctggat
cttgatgcctttgctgaagaactggaaagacagggctatggtgacaagcacatcactttg
tatgacattcgagctgagctaagctgcagatacaaggacctgagaaccccgtaccgttct
cccaacacagaggaggtcttcaatatgctgaccaaagaaactccagagacattttacata
ggtaaaatgatcatctgcaatgtgactgggattgcccacaggcgcccacagggagagagc
tacgaccaggcgatccggaatgatgaaactggcctttggcagtgccctttctgccagcag
gacaacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccaggt
caggccattggagtgaagacacgtctggataatggtgttgctggcttcatcccaacaaaa
tttcttagtgacaaggtggtcaagaggccagaagaaagggtgaaggtgggaatgaccgtc
cactgccgcatcatgaagattgacattgagaaattcagtgcagacctgacctgcaggacc
tcagacctgatggacaagaacaacgagtggaagctgcccaaagacacctactacgacttc
gactctgaggcagcagatcacaaacaggaagaagacatgaaaagaaagcagcagaggaca
acgtacatcaagagggtaattgctcacccatcattccacaacatcagcttcaagcaagca
gagaagatgatggagaccatggaccaaggggatgtgattattcggccgagcagcaaaggg
gagaaccatctgactgtcacctggaaggtcaacgatggcatttaccagcacgtggatgtc
cgggaggagggcaaggagaatgccttcagcctgggctccatgctctggattaacacagag
gagtttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcttttgcc
agagacctgttgaaccacaaatactatcaggactgcaatggtggagacaagaagaagctg
gaagagctgctgataaagaccaagaaagagaagccaacatttattccatattttattagt
gcctgtaaagacctacctggtaaattcctcttgggatatcagcctcgaggcaaaccaagg
atagagtatgtgacagtgacaccagagggattccgctaccggggccaagtcttccctact
gtgaatggacttttccgatggtttaaggatcattatcaggaccctgttccaggtattacc
cccagcagcagcagtcggaccaggactccagcctccattaatgctactccagctaacatc
aacctggcagacctgacacgtgcagtgaatgccctaccgcagaacatgacctcccagatg
ttcagtgccattgctgctgtgacaggccagggacagaacccaaatgccaccccagcacag
tggggctccagccagtacggctacggaggcagcggaggcggcagcagcgcgtaccacgtg
ttcacgactccagcacagcagcccgtggccacccctctgatgacccccagctactcctac
actactcccagccagcccatcaccacgccccagtaccagctccaggccaacaccacaccc
cagtccactcagtcccaggcacagcagccgtcatccagctccaggcagaggcagcagcca
aagaccaacagccacgctgccatcgactggggcaagatggccgagcagtggctgcaggag
aaggaggctgagcggaggaaacagaagcagaggttgacccctcgcccctctcccagcccc
atgatcgagagcacgcccatgtccatcgccggggacgccacgcctctcctggatgagatg
gatcgatag
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integrated database retrieval system
