Vidua chalybeata (village indigobird): 128798767
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Entry
128798767 CDS
T11587
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcha03036
]
128798767 (CHD5)
Chromosome and associated proteins [BR:
vcha03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128798767 (CHD5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
128798767
NCBI-ProteinID:
XP_053818557
LinkDB
All DBs
Position
22:4339889..4363454
Genome browser
AA seq
1958 aa
AA seq
DB search
MRGPAAARELLDDADNEEDVSEEDDGVLEGLDEFFAEDQVVVQKKKKSKKLKDGKAAKIK
RRKKEGSNDEISENEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDNE
DGSLKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPALPASPQHSALPTVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSMRSECSAGLGKRGKKRKKKKRTEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAPL
PPVLPAADPQLVLPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQR
KNDMDEPPAFDYGSGDEDNQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDK
KGDIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGK
KLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK
ESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACL
VVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF
LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL
TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGNSLVKSSG
KLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD
VEGMVSQGQRIAMPDAVTPFSDALSTKGGAATPGMKKKHGSTPPGDNKDVDDSSVIHYDD
AAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKTDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLLLEGPESKRSSEVVSSDPNTPVPASPAHTH
TVLGALADKTEAQLGFHEEKEPVEQKLRKVSDSQVPASAEVEREEHLESCDSKERPRKEK
QEDCEKAEPPSEPLVKGLFPPADEGIQEQEKPLEKAELSSSPGKGENKEVKPEDGKQEEK
EPSDAQQNGDKEEEEEGKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDI
WHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKL
LEQALVIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANA
VLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQGS
FGSAPIFNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggcggccgcccgggagctgctggacgacgcggacaacgaggaggacgtg
tcggaagaagatgatggggtgctggaaggattggatgagttttttgcagaagaccaagtt
gtggtacagaaaaagaagaaatccaagaagctgaaagatggcaaggctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgagatctcagaaaatgaagaggagatcgaggag
aaatcagaaagtgaagggagtgactattctcccaacaaaaagaagaagaaaaaactgaaa
gacaagaaggagaaaaagccaaaacggaagaagaaggatgaagaggaggatgacaatgag
gatggaagtttaaaggagcccaagagctcagcccagctcatggaggaatggggtctcgat
gacgtagattatgttttctcagaagaggattaccatactctgacgaattacaaggctttc
agccagttcctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatg
atgacggtgctcggtgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcggcggcggcggctgcggccgctgtggctgcagctgtggagactgtcaccatcgccccg
gcgctccccgccagcccccagcactctgccctgcccactgtcatcaggaaggccaagacc
aaggagggcaagggtccaggtgtacggaagaaaatcaagggctccaaagacgggaagaaa
aaggggaaagggaaaaagatggcaggcttgaaatttcggtttggaggaatccccagcaaa
aggaaaaagggctcctctagtgaagaggaggaacgggaagaatccgactttgacagcgcc
agcatcaacagctcctccatgcgctctgagtgctcggctggcctggggaagagagggaag
aagaggaaaaagaaaaagaggactgaagagggggacgggtacgagaccgaccaccaggac
tactgcgaggtgtgccagcagggcggggagatcatcctgtgcgacacctgcccccgcgcc
taccacctggtctgcctggaccccgagctggagaaggcccccgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggagccgaaggaagaggaggaggaggaggag
gatggtggcgaggaggaggaggatgaccacatggagttctgccgggtgtgtaaggatgga
ggggagctgctgtgctgcgacacctgcccgtcctcctaccaccttcactgcctgaaccca
ccgctgccagagataccaaacggtgaatggctctgcccacgctgtacatgccctcccttg
aagggcaaagtgcagcgcatcctgcactgggcctggaaggagccgccggccgccccgctg
ccgcccgtgctgcccgccgcggacccgcagctggttctgcccccgcccaaggtgctggag
ggcatcccggagcgcgagttctttgtgaagtgggctggcctctcctactggcactgctcc
tgggtcaaggagctgcagctggagctctaccacaccgtgatgtaccgcaactaccagcgg
aagaacgacatggatgagccaccggcctttgactacggctctggggacgaggacaaccag
agggagaagaggaagaacaaggacccccagtatgccaagatggaggagcggttctaccgc
tatggcatcaaacctgagtggatgatgatccaccgcatcctgaaccacagctttgataaa
aagggagacatccattacctgatcaagtggaaggacctgccctatgaccagtgcacctgg
gagatcgatgacatagacatcccctactatgagaacctcaaactcctctactggaaccac
agggagctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaa
aagctgaaagaggagaagctggaaaagcctccagaaacacctcttgtggatcctacggtg
aagttcgacaagcagccgtggtacattgatgccacgggaggcacgctgcacccttaccag
ctggaagggctgaactggctgagattctcctgggcacaagggacagatacaatcctagct
gatgagatggggctagggaagacggtgcagactatcgtgttcttgtactccctgtacaag
gagggccactcgaaagggccgtacctagtcagtgcccccctctccaccatcatcaactgg
gagcgtgagtttgagatgtgggcacctgacttctacgttgtgacctacacgggggacaag
gagagccggtcggtcatccgggaaaatgagttctcttttgaagacaacgccatccggagc
gggaagaaggtcttccggatgaagaaggaagcccagatcaagttccatgtcctgctcacg
tcctatgagctgatcaccattgaccaggcagtgctgggctccatagagtgggcctgtctg
gtggtggatgaagcacacaggctgaagaacaaccagtcaaaattctttagagtactgaat
agctacaagatcgattacaagctgcttctcacagggactccgctccagaacaacttggaa
gagctcttccacctgctcaatttcctgactccagagaggtttaacaacctggaggggttc
ctggaggagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctg
ggtccccacatgctgcggcggctcaaggccgacgtgttcaagaacatgccggccaagacg
gagctgatcgtgcgcgtggagctgagccagatgcagaagaagtactacaaattcatactg
acaaggaactttgaagccctgaattcaaaaggtggtgggaaccaggtctcactgctcaac
atcatgatggacctgaagaagtgctgcaatcacccgtacctgttccctgtggcagctgtg
gaggcccctatgctgcccaatggatcttatgatgggaattctttggtcaaatcttctggg
aaactgatgctgctccaaaagatgctgaagaagttacgggatgggggtcacagagttctg
atcttctcgcagatgacaaagatgctggatttgctggaggatttcctggagtatgaaggc
tacaagtacgagcgcattgacgggggcatcaccggcggcctgcgccaggaggccatcgac
aggttcaatgctcctggggctcagcagttctgcttcctcctctccacccgcgccggtggt
ctgggcataaaccttgctacggccgacactgtcattatttatgattctgactggaatccc
cacaatgacatccaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatg
atttaccgcttcgtgaccagggcctctgtggaggagcgcatcacccaggtggccaaaagg
aagatgatgctcacccacctggtggtccgcccagggcttggctccaagtcgggctccatg
accaaacaagagctggatgacatcctcaagttcgggacagaagaactcttcaaggatgat
gtggagggcatggtgtctcagggacagcggattgcaatgccggatgctgttacccctttc
tcggacgcactgtcaacaaaagggggtgcagcaacccctggcatgaaaaaaaagcatggt
agcaccccaccaggtgacaataaggatgtagatgacagcagtgtgatccactacgatgac
gctgccatctctaagcttttggaccgaaaccaggatgcgactgacgacacggagctgcag
aacatgaatgagtatctcagctcctttaaagtggctcagtatgttgtgagagaagaggac
ggtgtggaggaggtggaacgggagatcatcaagcaagaggagaatgtggaccctgactac
tgggagaagctgctgcggcaccattatgagcagcagcaggaagatctggccaggaacctg
gggaaagggaagagaatccgcaagcaggtcaactacaatgacacctctcaggaggaccaa
gagtggcaggatgagctctctgacaaccagtcagagtattccattggctctgaggatgag
gatgaagactttgaagagaggccagaaggccagagtggcagaagacaatcacggagacaa
ctgaagactgacagagacaaacctctccctcctttgctggcaagagttggggggaacatc
gaggttctgggcttcaacgcccggcagcgcaaggcattcctgaatgccatcatgcgctgg
ggaatgccaccccaggatgccttcaactcccactggctggtccgggatctgcgagggaag
agcgagaaggagttcagggcatacgtgtctctcttcatgagacatttgtgtgagcccggg
gctgatggtgctgaaacctttgcggacggcgttccccgggaagggctgtctcgccagcac
gtgctgactcgcatcggggtcatgtcactagtaaggaagaaggtccaggagttcgagcat
gtcaatgggaagtacagcaccccagacctgcttcttgagggcccagagagcaagagatcc
agcgaggttgtgtcttcagatcccaacacacctgtcccggccagtccagcacacacacac
acagtactaggggctcttgcagataaaacagaagcacaattggggttccatgaggaaaag
gagccggtggagcagaagctcagaaaggtgtccgacagccaggtacctgcaagtgccgag
gtggagagagaagagcacctggaaagctgtgacagcaaggagaggccaaggaaagagaag
caagaggattgtgaaaaggctgagcctccttctgagcccctggtgaaaggcctgttccct
cccgcagacgaggggattcaagagcaagagaagcctttggagaaggcggagttgagcagc
agcccggggaagggggagaataaagaagtcaaaccagaggatggcaagcaggaggagaag
gaaccaagtgatgcccagcaaaacggtgacaaagaggaagaggaggagggaaagaaggat
gacagaaacatgaacttcagattcatgttcaacattgctgatggtggcttcacagagctg
cacacgctgtggcagaatgaggagagggctgccatgtcctctggcaagatctacgacatc
tggcaccgccgacacgactactggctgttggcaggaattgtcactcatggctatgcccgc
tggcaggacatccagaatgacccgcgctacgtgatcctgaatgagcccttcaagtcagag
atacacaaggggaactaccttgagatgaagaacaagttccttgctcggcgttttaagttg
ctggagcaggccctggtgatcgaggagcagctgaggagggcggcgtacctcaacatgacc
caagaccccagtcacccggccatggcactgaacgcgcggctggcagaagtggagtgcctt
gctgagagccaccagcacctctccaaagagtccctggctgggaacaagcctgccaacgct
gtcctgcacaaggtgctgaaccagcttgaggagctgctgagtgacatgaaggctgatgtg
acacgcttgccctccatgctgtcccgcatcccgcccgtggctgcccggctgcagatgtca
gagcggagcatcctcagccgcctggccacccgtggaggggatccagctgcccagggctcc
tttggctctgctccgatcttcaacaacaactttgggccaaatttccgtggtccggggcca
ggtgggattgtcaactacagccagatgcctctgggaccctacgtgactgatatttag
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integrated database retrieval system
