Vidua chalybeata (village indigobird): 128798987
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Entry
128798987 CDS
T11587
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcha03037
]
128798987 (NPHP4)
Cilium and associated proteins [BR:
vcha03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
128798987 (NPHP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
128798987
NCBI-ProteinID:
XP_053818988
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All DBs
Position
22:4385319..4407193
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AA seq
1362 aa
AA seq
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MLSFPTFPWLCHPLAWRQVLQQHVKLSVAMRLIWAPLRKRELPLLPKCVLSFGDAELACP
RASPKPVCCALQGAQYQLRLSLFDATYHHFFGRTWRSSWRAASAAPPRSARATFNEVVYF
HTSLNHPGIAAVVEVVMMAREGDGGSQHLSCGFGIIPLFHGGSEVTDPATEDRALKLYHG
TPRALLHPRFQDPVEKNKYMTVMEKSHLQYGLKSHQPLEAIFHLLPENLLISGLQTVPGL
LPAHGDTGDCLQKPRLMKTVTCYLERLFIHLYPSLEEFEEELLDLLNSDRLLQANTALDG
EEVVVRERRLHVGVHNGLRFVRAPQVAVLVPEAELSPGRCQGMPSSGARDADQALVLRSR
IQLSEMVPHPAFRVCFQLEYVFCSTARAGGKALSGSARSEAADMRSVRWAVWSPVPGTGD
TDVILPLRGGARRGPCQALVYRTPPSSRQGKHMESGTIQFHVSTDSEEHLVTAAKILCKD
RDESKKPPTPSLRVPAPRRVAVSPRGPGLSVSQLMASPRGTGRTLQQDGAITHLEADLGS
PDAEPCASDQLRALPFTPLQLPMAAVGLQACSSHVSLSRAALARLHAAGFPDILDRNQEP
VEISEPVELGSFNLRLEEADPLQGNEIVLQFLAFGRDAQGSMEGLWPRTIFLTFQFYRFP
PVTTPRLQLVSTEGGLATGLAVPAQLLVRVNEDGTLTRPPGLQLKYMVDPAFLRPGEQRW
FLRYLAEHSLQIDVWDGDSLLHFGSAAIKLEPLLRQGQTAVRTYHELEVATTEYEPDGTV
MGREALRHGALRPLGVRVAVRGRLHLCLANIGHPCEETPEQLPSHSCIVTAPDTTVTTPG
GRGCSLSTPGGRRTAWARRLVDVDNELEAALRSRRPEGWPKQRAWDLQVIDSYRNHIKGE
CIYQMLSQAITATRTVHAVLGTAEFFEFALKNPYGVQHTVTIEVDHPELSVILDPREWRH
FKELTRSVTPVEEDMFHLSEDLKPQVYLRPSETVHIPFKFQTFSADPAMVAAQGPAGLST
GANENTHSLGKSGAKQTKLIQVSFQVSRGKPIALLRVKVEPQPHVVDQTFRFYHPELTFL
KKTIRLPPWHTLPGTPVGVPGGQPEMFVRCSDPDIICETKSLGPGEPQDIFLKVAGGPSP
QIKKFFVAIYTDAWLAAPVQIWQFYLHSLQRLDVACTAGQLTRLSLLLRGTAAPRRVQAF
TSHPQELEVDPNGAFLLPANGIQDLYIGVRPRRAGSKFIYLNLVDVESHQLVSSWLLCLS
CRQPLISKAFEISLPAGGGKGCNKRITYTNPYPSPRLYFLCTNRPDLLQFKEDSFEVAGG
EVYTIGLRFAPSQTVGEEEILIHINDHEDKNEETFCVKVLYQ
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttttcccacttttccttggctctgtcatcctctggcttggaggcaggttctg
cagcaacacgtgaagctgtctgtggccatgcgcctgatttgggcaccccttagaaaacgg
gaattacctctcttacccaagtgtgttctgagctttggggacgcagagctggcttgtccc
cgagcgtccccaaagccggtgtgttgtgccttgcagggagcccagtaccagctgcgcctg
tcccttttcgatgccacctaccaccacttctttgggaggacgtggaggagcagctggcga
gctgccagcgctgccccgccgcgctcggccagggcgacgttcaacgaggttgtttatttc
cacacctccttgaaccaccctggcattgctgctgtcgtggaagttgtaatgatggctagg
gaaggggatgggggctctcagcacctttcctgcggctttggaatcatccccctcttccac
ggcggatcagaggtgacagacccggccactgaggacagagcgctgaagctgtaccatggg
acaccacgtgccctactgcacccacgcttccaggaccctgtggaaaagaacaaatacatg
acagtgatggagaagagccacctgcagtatggcctgaagtcccaccagcccctggaggca
atatttcacctacttcctgaaaacctgctgatatctgggctgcagactgttcctggcttg
ctgccggcacatggagacacaggcgactgcttgcagaagccccggctgatgaagacggtc
acctgctatctggagcgccttttcatccacttgtacccttccctggaggagtttgaggag
gaattgctggatttactgaacagtgatcgcttacttcaggctaacactgcgctggatggt
gaggaggtggtggttcgggagcggcggctgcacgtcggcgtccacaatggcctgcgcttc
gtccgggcaccgcaggtcgctgtgctggtgccagaggcagaattgtcaccaggtcgctgc
caggggatgcccagctctggagccagggatgcagatcaagccctagtgctgaggagccgc
atccagctgagtgaaatggtccctcacccggcattcagggtctgcttccagctggaatat
gtcttctgcagcacagcgagagctggtggcaaggccctgtccggcagtgctcgcagtgag
gcggccgacatgcgctcggtgcgctgggctgtctggagccccgtcccgggcaccggtgac
acggacgtcatcctccccctgcgtggtggtgcccgccgtggcccctgccaagccttggtc
taccggaccccaccgagctcccggcaggggaagcacatggagtctgggactatccaattc
catgtttccactgattcggaagaacatcttgtaactgctgcgaagatcctatgtaaagac
agggacgagtcgaagaagcctcctacgccatcgctgagagtgccagccccacgacgagtg
gcagtctccccacgaggaccagggctgtccgtatcccagctcatggcctcgccacggggc
acaggccggaccctgcagcaggatggggccatcacccacctggaggccgacctgggctcg
ccggacgcagagccctgtgccagcgaccagctgcgggcgctgcccttcaccccgctgcag
ctgcccatggctgctgtggggctgcaggcatgcagttcccacgtgtccctctctcgtgcc
gcgctggcgcgcctgcacgctgccggttttccagacatcctggaccgcaaccaagagccg
gtggaaatctcagagccagtggagctgggcagtttcaacctgcggctggaggaagctgac
cctctgcagggcaatgaaatagtcctgcagttcctggcttttggcagagatgcccagggc
agcatggaggggctgtggccaaggactatcttcctcaccttccagttctaccgtttccca
ccggtcaccacgccccggctgcagctggtcagcacagagggcgggctggcaaccgggctg
gctgtgccggcgcagctccttgtccgtgtcaacgaggatgggaccctaaccagaccaccg
ggcttgcagctgaagtacatggtggatccagctttcctgcggcccggggagcagcgctgg
ttcctgcggtacctggctgagcacagcctccagattgatgtctgggatggagattccctg
ctccattttgggtctgctgccattaaactggagcccctgctgcgccagggccagacggcc
gtcaggacctaccacgagctggaggtggccacgactgagtacgagccggacgggacggtg
atgggccgggaggctctgcggcacggcgccctgcggcccctcggagtccgtgtggctgtg
aggggccgcctccacctctgcctggccaatattggtcacccatgcgaggagaccccagag
cagctgccatcccattcctgcattgtcactgcaccagacaccactgtcaccaccccaggt
ggcagggggtgctccctgagcactcctggtggcaggaggacggcgtgggcacggaggctg
gtggatgtggacaacgagctggaggccgcactgcgcagtcgccggccagaaggctggcca
aagcagcgtgcctgggacctgcaggtcattgactcctaccggaatcacatcaagggagag
tgcatctaccagatgctcagccaggccatcacagccacccgcactgtccacgctgtgctg
gggacagctgagttctttgagttcgccctgaagaacccgtatggcgtccagcacaccgtg
accattgaggtcgaccaccctgagctcagtgtcatactggacccgagggagtggcgccac
ttcaaggagctgaccaggagtgttacaccggtggaagaggatatgttccatctcagtgag
gatctcaagcctcaggtctacctgcgccccagtgagactgtccacatccccttcaaattc
cagaccttctccgcagaccccgccatggttgcggcacaggggccagctgggctgagcact
ggtgccaatgagaacactcactcccttgggaagagtggagccaagcagacaaagctcatc
caggtctccttccaggtgagcagggggaagcccattgcactcctgcgggtgaaggtggag
ccacagccccatgtggtggaccagacctttcgcttctaccacccagagctcaccttcctg
aagaagaccattcggctgcctccctggcacactctccctggcacgccagtgggggtgccg
ggaggacaacctgagatgttcgttcgctgcagcgaccccgacatcatttgtgaaaccaaa
tccttggggcctggcgagccacaggacatctttctcaaagtagccggaggaccaagcccg
cagatcaaaaagttctttgttgctatttatacggacgcctggctggcagcacctgtccag
atttggcagttctacctgcactccctgcagcgcctggacgtcgcctgcacggccgggcag
ctcacgcgcctctccctgctgctgcgtggcaccgcggccccgcggagggtgcaggccttc
acttcccacccccaggagctggaggtggatccgaacggtgccttcctcctccctgccaat
ggcattcaggacctctacattggtgtgaggccacggcgggctggcagcaagttcatctac
ctcaacctggtggatgtggagtcccaccagctggtgtcctcctggctgctctgcctgtcc
tgcaggcagcctctcatctccaaggcctttgagatctcgctgcctgcgggaggtgggaaa
ggctgcaacaagcgcatcacctacaccaacccctacccctcgccccggctctacttctta
tgcaccaaccgccctgacctgctgcagttcaaggaggactccttcgaggtggcgggaggg
gaggtgtacaccatcggcctgcgcttcgccccgagccagactgtgggggaggaggagatc
ctgattcacatcaatgaccacgaggacaagaatgaggagaccttctgtgtgaaggtcctg
taccagtga
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