Vidua chalybeata (village indigobird): 128799163
Help
Entry
128799163 CDS
T11587
Symbol
NECTIN1
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03266
Virion - Herpesvirus
vcha04514
Cell adhesion molecule (CAM) interaction
vcha04517
IgSF CAM signaling
vcha04520
Adherens junction
vcha05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
128799163 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128799163 (NECTIN1)
04517 IgSF CAM signaling
128799163 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128799163 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128799163 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vcha04515
]
128799163 (NECTIN1)
04090 CD molecules [BR:
vcha04090
]
128799163 (NECTIN1)
Cell adhesion molecules [BR:
vcha04515
]
Immunoglobulin superfamily
Nectin family
128799163 (NECTIN1)
CD molecules [BR:
vcha04090
]
Proteins
128799163 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
ig
Ig_2
I-set
Ig_PVRIG
C1-set
DUF5849
TM_ErbB1
EphA2_TM
Flp1_like
Motif
Other DBs
NCBI-GeneID:
128799163
NCBI-ProteinID:
XP_053819300
LinkDB
All DBs
Position
23:complement(2169894..2265796)
Genome browser
AA seq
538 aa
AA seq
DB search
MASRLQTSCRASWWTIGVCILAAALLPGLQAQTVLVNDSVSGFIGTDVVLHCSFTNSLPI
VKITQVTWQKATNGTKQNVAIYNPAMGVSILSPYKERVTFRNPSFKDGTIQLSRLELEDE
GVYICEFATFPTGNREGQLNLTVLAKPTNWMEGTKRPLIAKSGRTEKILVATCTSSNGKP
PSTVTWDTKLKGEAEFQEIRNSNGTITVISRYRLVPSREAHRQQLTCVVNYQLERFTDSI
TLNVQYEPEVTIEGFDGNWFLNRKDVKLICKSDANPPAHTYEWKLPNGTLPGSVEIQNNT
IYFKGPVSYSVAGTYVCEATNAIGTRSGLVEVNVTDKPLPQSAPGGIIGIVGGVIAAVFI
IGVAVTVVIVYRRQQKSRSDTDNDLIDLPPSHKPAPPPKRKQDMKSHLTPEDIQVVHLDN
MKHEEEIQKFPLQTPYYDMAAPEPSPYSDKLNEDQGLRRRNEREWTNFGKCHSEISNASD
YLTRCYSHEDRYLEKIPHVYAPLSDLPQDLYPHHSDISFCCPPPGSRAPYICPKEQYV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacggctgcagacaagttgccgtgcatcgtggtggactatcggagtttgcatc
ctggcagccgcgctcctaccagggctgcaagctcagactgtcttggtcaatgactccgtc
tcggggttcatcggcacggacgtggtgctgcactgcagcttcaccaactcgctgcccatt
gtgaagatcacgcaggtgacgtggcagaaggccaccaacggcaccaagcagaatgtggcc
atctacaaccccgccatgggcgtgtccatcctgtccccctacaaggagcgggtgactttc
cggaacccttccttcaaggatggcaccatccagctgtcccggctggagctggaggatgag
ggggtttacatctgtgagtttgccactttcccaaccggcaaccgggaagggcagctgaac
ctcaccgtgctggccaagcccacgaactggatggagggcaccaagaggccactaattgcc
aagtctggcaggacagaaaagatcttggtagccacctgcacctcctccaacgggaaaccc
cccagcaccgtcacctgggacacgaagctgaagggggaagcggagttccaggagatccgg
aacagcaacggcaccatcacggtgatcagccggtaccggctggtgccgagccgcgaggcg
caccggcagcagctcacctgcgtggtcaactaccagctggagaggttcaccgacagcatc
accctcaacgtgcagtatgagccagaagtcaccatcgagggctttgatggcaactggttc
ctgaaccgcaaggatgtgaagctgatctgcaaatctgatgccaaccccccagctcacacc
tacgagtggaagctgccaaacgggaccctgccagggagcgtggaaatccagaacaacacc
atctacttcaaagggcccgtgtcctacagcgtggccggcacctacgtctgcgaggccacc
aacgccatcgggacacgctcgggcttggtggaagtcaatgtcacagacaagccactacct
cagagtgcccccggaggcatcatcggcatcgtgggaggcgtcatcgccgccgtcttcatc
atcggcgtggccgtcaccgtggtcatcgtctacaggcggcagcagaagagccgctccgac
acggacaacgacctgattgacctccctccatcccacaaacctgcccctccaccaaagagg
aaacaggacatgaaaagccacctgactccagaagacatccaggtcgttcacttggacaac
atgaaacacgaggaggagatccagaagttccccctgcagactccctactatgacatggca
gcccccgagccctctccctacagtgacaaactgaatgaggatcaaggtcttcgtagacgt
aacgagcgagagtggacaaactttggaaagtgtcactcagagatatcgaatgcgagtgat
tacctgacccgctgttactcacatgaagatcgatatctggagaagatccctcatgtctat
gcccccttgtcagacctcccacaagatctttatcctcaccattccgacatctccttctgc
tgcccacctcccggctcccgggctccttacatctgtcctaaggaacagtatgtttaa
DBGET
integrated database retrieval system
