KEGG   Vidua chalybeata (village indigobird): 128800451
Entry
128800451         CDS       T11587                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
vcha  Vidua chalybeata (village indigobird)
Pathway
vcha03020  RNA polymerase
vcha03420  Nucleotide excision repair
vcha04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:vcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    128800451 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    128800451 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    128800451 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcha03021]
    128800451 (POLR2E)
   03400 DNA repair and recombination proteins [BR:vcha03400]
    128800451 (POLR2E)
Transcription machinery [BR:vcha03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     128800451 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     128800451 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     128800451 (POLR2E)
DNA repair and recombination proteins [BR:vcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      128800451 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1 DUF7890
Other DBs
NCBI-GeneID: 128800451
NCBI-ProteinID: XP_053821589
UniProt: A0A851KVX6
LinkDB
Position
27:5977380..5979984
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggttgtggaagatccgcaagaccatcatgcagctc
tgccacgaccgcgggtatctggtgacccaggacgagctggatcagacgctggaggagttc
aaggcgcagttcggggacaagcccagcgagggccgcccccgtcgcaccgacctgaccgtg
ctggtggctcacaacgatgatcccaccgaccagatgttcgtgttcttccccgaggagccc
aaggtggggatcaagacgatcaagatgtactgccagcgcatgcaggaggagaacatcacc
cgggcactgatcgtggtacagcagggaatgaccccctcggccaagcagtccctggttgac
atggctcccaaatacattctggagcagttcctgcagcaggagcttctcatcaacatcacg
gagcatgagctggtgccagagcacgtggtcatgacaaaggaggaagtaacggagctgctg
gcccgatacaaactgagggagaaccagctccccaggatccaggctggggaccccgtggcc
cggtacttcgggataaagcgtggccaggtagtgaagatcatcaggcccagcgagacggcg
ggcaggtacatcacctacagactggtgcagtga

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