Vidua chalybeata (village indigobird): 128800470
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Entry
128800470 CDS
T11587
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
vcha
Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcha03021
]
128800470 (MED16)
Transcription machinery [BR:
vcha03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
128800470 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
DSE1_N
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
128800470
NCBI-ProteinID:
XP_053821631
LinkDB
All DBs
Position
27:complement(3279158..3287356)
Genome browser
AA seq
830 aa
AA seq
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MDLAYVCEWEKKPKSNHCPSIPLVCAWSCRNLIAFTTDLRNEEEKDLTHMVHIIDTEHPW
DVYSVNSGHTEVITCLEWDQSGSRLLSADADGHIKCWAMTDHLANSWENTVGSVVEGDPV
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPNGQVLTATESLCRLRCRVALADVAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNE
KCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNNSIVECWSL
RKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVA
NDTKFFPGLGLALAFHDGSVHIVHRLSLQMMAVFYSSSSQRPVDEPALKRPRTTGPLVHF
KAMQLSWTSLALAGVDSHGKLSMLRISPSMGHVLDMNMSLRHLLFLLEYCMVTGYDWWDI
LLHVQPSMVQNLVEKLHEEYMRQNAALQQVLSTRIVAMKASLCKLSSSTIARVCDYHAKL
FLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDVDIDKVMINLKTEEFVLEMTTL
QSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGLLKPS
CLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDALIDECCLLPSQLLIPNIDW
LPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRAPGQPKIDHLRRLHLGAYP
TEECKSCTRCGCVTMLKSPNKVTAVKQWEQRWIKNCLCGGLWRKMPLNYS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggacctggcctacgtgtgcgagtgggagaagaagcccaagagcaaccactgcccctcc
atcccgctggtgtgcgcctggtcctgccgcaacctcatcgccttcaccacggacctccgc
aatgaggaggagaaagatctcacccacatggtccatatcatcgacaccgagcacccctgg
gacgtctactctgtgaactcgggccacactgaagtcatcacgtgcctggagtgggatcag
tcaggctccaggctgctctcggcagatgctgatggccacatcaagtgctgggccatgaca
gatcacctggccaacagctgggagaacacggtgggcagcgtggtggagggggacccggtg
gtggccctgtcctggctgcacaacggcgtcaagctggctctgcacgtggagaagtctgga
gcctcgaacttcggcgagaagttttcccgggtgaagttctctccgtcgctgacgctgttt
ggcgggaagcccatggagggctggattgctgtgaccatcagcgggctggtcaccgtgtcc
ctcctcaagcccaacgggcaggtgctgacggccactgagagcctgtgccgcctccgctgc
cgcgtggccttggccgacgtcgccttcacgggcgggggcaacatcgtggtggccacgtct
gatggcagcagcacgtcccccgtgcagttctacaaggtgtgtgtcagcgtggtgaacgag
aagtgcaagatcgacaccgagatcctgccgtccctcttcatgcgctgcaccaccgacccc
gcgcgcaaggacaagtacccggccatcacccacctgaaattcctggctcgggacatgtca
gagcaggtgctgctttgtgcctccaaccaaaacaacagcatcgtggagtgctggtccctt
aggaaggagggcctgcctgtcaacaacatcttccagcaaatctctcctgtggtgggagac
aagcagcccatgatcctgaagtggcggatcctgtctgccaccaacgacctggaccgggtg
tcggccgtggcgctgccaaagctgccaatctccctgaccaacaccgacctgaaggtggca
aacgacaccaagttcttccctggactgggcctggccttggctttccatgatggcagtgtc
cacatcgtgcaccggctgtccctgcagatgatggccgtgttctacagctcctcctcgcag
cgccccgtggacgagccggccctcaagcgcccgcgcaccacagggcccctggtgcacttc
aaggccatgcagctctcctggacgtcactggccctggctggtgtggacagtcatgggaag
ctgagcatgctccgcatctccccctccatgggccacgtgctggacatgaacatgtccctg
cggcacttgctgttcctgttggagtactgcatggtgactggctacgactggtgggacatc
ctgctccacgtccagcccagcatggtgcagaacctggtggagaagctgcacgaggagtac
atgcgtcagaacgcggccctgcagcaggtgctctccacacgcatcgttgccatgaaggcg
tcgctgtgcaagctctcctccagcaccatcgcccgtgtgtgtgactaccacgccaagctc
ttcctcattgccatcagctgcaccctgaagtcgctgctgcgcccacacttcctcaacacc
cctgacaagagccccggggaccggctcaccgagatctgctccaagatcacggatgtagac
attgacaaggtgatgattaacctgaagacggaagagtttgtcctggagatgacgacgttg
cagtccctgcagcagctcatccagtgggtgggggattttgtgctctacctgctggccagc
cttcccaaccagggctccccggtgcgccctggccacagcttcctgcgcgacggcgcgtcc
ctcggcatgttccgggagctgatggtggtcatccgcatctgggggctgctgaagcccagc
tgcctccccgtgtacacagcaacctcggacacccaggacagcatgtccctgctcttccgg
ctcctgaccaagctctggctgtgctgtcgtgaggaaaatcacatcacagagcctgatgat
gccctgatcgatgagtgctgcctcctgcccagccagctgctcattcccaacattgactgg
ctgcccatcaacgatggcatcatcagcaagctgcagaacaagcagctggtccggctgcag
tttgggaaggctcctgggctcgttggccacactgtctcttcccagttcgatgcctttgtc
agggcccctggacagcccaaaattgaccacctgaggcggctgcacctgggcgcgtaccca
acagaggaatgcaagtcctgtaccaggtgtggctgtgtcaccatgctgaagtcgcccaac
aaggtgacagcagtgaagcagtgggagcagcgctggatcaagaactgcctgtgtggggga
ctgtggaggaagatgcccctcaactactcctga
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