Vidua chalybeata (village indigobird): 128800574
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Entry
128800574 CDS
T11587
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128800574 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcha03009
]
128800574 (REXO1)
Ribosome biogenesis [BR:
vcha03009
]
Eukaryotic type
Pre-60S particles
RNases
128800574 (REXO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
128800574
NCBI-ProteinID:
XP_053821837
LinkDB
All DBs
Position
27:complement(1447412..1491572)
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AA seq
1227 aa
AA seq
DB search
MLRSTGYFRGIDCPFLNAGGSGPGRGCRRPYCHFRHPPVAPAPCGASGASSDPSVGLPLG
HGAERGYDPYNPELPRPSLEDGFLADITDVTPGILELELVNKAIEAVKNEVEREQKKYEE
LLETTKEFGASEGSSLISNTPVSAAGPQNDSFASLEYNPGSYNFNNSDYNPTPLAAAGRS
SKYTLDSSRSKGSSLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYSARL
LGKATTKGSKRERASDYEDSYSPSRKKLCEDPDDDEVLARFSSSEDEAEVEYKTASGSSP
SKAGSESESNEFSSKEQSTKVDGSASQESKEAAQHREDLPNSQKNLAKNSSDKSSKAAKL
CSGKNNKEIENKNRDSKDKTKKKKTDVSKAPGLSEAGKKEKNKNADKDKVLKKEEKLKTK
NEEKNCKDKSVKVKTDGNLKKPEKQKSEKVDGCKKEKSKSSTSSSGKSKSEGVTKGTEKV
GSSKKDSQSRTADVKTGKERSGRKNKEKGTKTSLERKKDKVSCAGQGDPKKGRKQQSLSH
VDLFGDESGDEDDKGRPLSSSLLDVSSDLDGADSGSASDSDKDRRKKVKRSKLSKSSSSS
STSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQPSKEEANEEKTEDN
LTTLFPGQKRRISHLVKQGNAEAPSKPVVRPYRPPTAQEVCYQRIQLAQQQAAQLVGTVQ
KTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKATVGGRSVTPSNDSEAPTLPLKPCTLA
GMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLKFCS
SSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPASTNKTSNKKVVSHE
AVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKENGYPMPHPEKAGR
AVLFTAEEKKVIDSSCRICCRCGTEYMVSASGSCIRKEECVHHWGRLRKQRVPGGWETHY
SCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYTKQGL
ELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLNMFS
ADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQDNVE
GHDSSEDARACMELMVWKIREDAKVKR
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatccaccggctacttccgcggcatcgactgcccgttcctcaacgccgggggg
tcgggaccgggtcgggggtgccgcaggccctactgccacttccggcaccccccggtggcc
ccggcgccgtgcggagcctccggagcctcaagcgaccccagcgtggggctcccgctcgga
cacggcgcagagcgaggctatgatccctacaaccccgagctgcccaggccctcgctggag
gatggctttctggctgacattacagatgtcacacccggaattctggagctggagctggtc
aacaaggccattgaggcagtgaagaacgaagtggagagggagcagaagaagtacgaggag
ctgctggaaaccacaaaggagtttggtgcttcagagggctcctcactcatttcaaacaca
cccgtgtcagctgctgggcctcagaatgattcctttgcctccttggagtataatccaggg
agctacaacttcaataactcggactacaaccccactcctctggctgctgctggccggtcc
agtaaatacactttggattcctcccgctccaaagggagctcactggagtatgtccccaag
gctgtagtacagaataaaaagtacagcagcactgtcactaacaacaaatacgtgattgat
gactccaagccttccacagacttggaatatgaccccctttccaattactctgccaggctg
ttgggcaaagccacgaccaaggggtccaaaagggaaagggcctctgattatgaggactcc
tactctccatcacggaagaagctctgcgaagatcccgatgatgatgaggtgttggccagg
ttctcctcctctgaagatgaggctgaggtagaatataaaacagcttctggtagttcaccc
tcaaaagctggttctgagagtgagtcaaacgagttctccagcaaagagcagagcacaaaa
gtggatggctctgcttcccaggagagcaaagaagcagcacagcacagggaggaccttcca
aattcacagaaaaaccttgccaagaactcatcagacaagagctcaaaggcagcgaagttg
tgttctggtaagaacaacaaggaaattgaaaataaaaacagagactccaaagacaaaaca
aaaaagaagaaaactgatgttagtaaagcaccaggcctcagtgaggctgggaagaaggag
aaaaataaaaatgcagacaaagacaaagtgctcaagaaagaagaaaaattaaaaaccaag
aatgaagagaaaaactgcaaagacaaaagcgtcaaagtgaaaacagatgggaacttgaag
aaacctgaaaaacagaagtcagaaaaagtggatgggtgtaagaaagaaaaatccaagtcc
tccaccagcagttcaggaaagagcaagagcgagggtgtcaccaagggcacagagaaggtg
gggagcagcaagaaggattcgcagagcagaacagctgatgtgaaaactggcaaggaaaga
tctggtcgtaaaaacaaggagaaagggaccaagacctccctggagcgaaagaaagacaag
gtcagttgtgcaggacaaggagaccccaagaagggtcggaagcagcagagtttgagccac
gtggacctgtttggagatgagagtggagatgaggatgacaaaggccggcctttgtcctcc
tccttacttgatgtgagctcggacttggacggggctgactctggctcagcctctgacagt
gacaaggacaggaggaagaaagtgaagcgctcaaagctgtccaagtcctcatcatcttcc
tcaacatctgatgacattgattattccatccttgagaaagatgtggacttcgagtcagat
cccatggaggagtgtctgaggatctttaatgaatctaaagatgtgaaaactgaagacaag
ggaaggctgggcaaacagccatccaaagaggaagcaaatgaagaaaagacagaagataat
ttaactaccttgtttcctggccaaaaaagaaggatctctcatcttgtcaaacaaggaaat
gcagaggccccgagcaagccggtggtgcggccgtaccgtccccccacggcccaggaggtg
tgttaccagaggatccagctggctcagcagcaggcagcacagctggttgggactgttcaa
aagacctctctctgtttgccaggagaaaagaggaggattgctcacgtgccaaatgcagcc
ctcaccgcagcagccaagcaaagcctcgggagcagtaaggcgactgttggtggcaggagt
gtcacaccttccaatgactctgaagcccccacccttcctctgaagccttgcactttggct
gggatggcttccaagaccaccagcaccatcgtgcccaaaagggtagcacatgttccctcc
ttacagagcaccactttacagaggcctgttattcccacagaatttggtgctaaagtccca
accaacattcgccagaggtatctcaatctcttcattgatgagtgcctgaaattctgctcc
tcctcccaggaagccttcgacaaggccctggcagaggagaaggtggcctatgagcgcagc
accagtcgcaacatctacctgaacgtggccgtgaacaccctgaagaagctccgcagcctc
gtgcccaactccccagccagcaccaacaagacaagtaacaagaaggtggtgtcccacgag
gctgtgctgggagggaagcttgctgccaagaccagctttactctgaaccgctcagggagc
ctgagagccgaggatctgacaggagctgccctgtaccggcgcctcaaggagtacctgatg
actgaggagcagctcaaggagaacgggtacccaatgcctcaccctgagaaggctggacgt
gctgtgctcttcactgcagaggagaagaaagtgattgactcctcgtgcaggatctgctgt
cgctgtggcaccgagtacatggtctcagcctcggggagctgcatccgcaaggaggagtgc
gtccatcactgggggcggctgcgcaagcagagagtgccaggtgggtgggaaacccactac
agctgctgctctggagctgtggggtcaccaggctgccaggttgctaaacaacacgtgcac
gacggacgcaaggagagcctggatggctttgtgaagacttttgagaagctgcccacgact
gatggctaccctgggatctacgccttagactgtgaaatgtgctacactaagcaaggactg
gagctgacaagagtaactgtgatcaactcggagctgaaagtggtgtacgacacctttgtc
aagccagactccaaggtggtggattacaacaccagattctcaggtgtgacagaagaggac
ctggaaaacacgagcatcaccctgcgggatgtccaagccgtcctactgaacatgttcagt
gcagacaccatactgatagggcacagcttggaaagcgacttatttgcactaaagctgatc
cacggcaccgtggtggacacagccatcgtgttcccccaccgcctggggctgccctacaag
cgggccctgcgcacactgatggccgactacctcaaacgcatcatccaggacaacgtggaa
ggacacgactccagtgaggatgccagagcctgcatggagctgatggtgtggaagatcaga
gaggatgccaaggtgaagcgatga
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