Vidua chalybeata (village indigobird): 128801566
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Entry
128801566 CDS
T11587
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128801566 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcha03021
]
128801566 (SMARCD1)
03036 Chromosome and associated proteins [BR:
vcha03036
]
128801566 (SMARCD1)
Transcription machinery [BR:
vcha03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128801566 (SMARCD1)
Chromosome and associated proteins [BR:
vcha03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128801566 (SMARCD1)
PBAF complex
128801566 (SMARCD1)
GBAF(ncBAF) complex
128801566 (SMARCD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
128801566
NCBI-ProteinID:
XP_053823520
LinkDB
All DBs
Position
30:complement(556578..563301)
Genome browser
AA seq
511 aa
AA seq
DB search
MAARAGFQSGPASGGGAGAAPGAALGPGAPGGAVRMGPAPGQGLYRSPLPGAAYPRPGML
PGGRLAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAK
KKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRI
FISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIEL
DKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARL
LGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHAL
LMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKI
HETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQ
PWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggccgggttccagtcggggcctgcgagcggcggcggcgccggggccgcg
cccggggccgcgctgggcccgggagcgccgggcggggcggtgcgcatgggcccggcgccg
gggcaaggcctgtaccgctcgccgttgcccggagccgcctacccgcgccccgggatgctg
ccgggcggccgcctggcgccacagggtccggccatgggtcctcccgggtacggcgggagc
ccagcggtacggcccgcgctggcgcaggccgggctggaccaggctcgcaagcggccggcg
ccgcagcagcttcagcaggtgcagccgcaggcggtgcccaaccgcaaccacaatgccaag
aagaagaagatggcagataaaatcctcccacagcggatccgtgagctcgtgcccgaatcc
caggcctacatggacttgctggccttcgagaggaagctggaccagaccatcatgaggaag
cgtctggatatccaggaggctctgaaacgtcccatcaagcaaaagcgaaagctgcgtatt
tttatctccaacaccttcaaccccgccaagtcggatgcggaggacggcgaaggaactgtc
gcctcctgggagcttcgggtggaaggacggctgttggaggattctgctctgtccaaatat
gatgccaccaagcagaaaaggaaattttcgtccttctttaaatctctggtcattgaactt
gataaagacctgtatggccctgacaatcacctagtagagtggcacaggactgctacaact
caggagacagatggcttccaggtgaagaggccaggggatgtgaatgtgcgctgcactgtc
ctgctgatgctggattaccagcctccccagttcaaactggatccacgcctggctcggctc
ctgggcatccacacgcagacccggcctgtgatcatccaagccctgtggcagtacatcaag
acccacaagctgcaggacccccacgagcgggagtttgtcatctgtgacaagtacctgcag
cagatattcgagtcgcagcggatgaagttctctgagatcccacaaaggcttcatgccttg
ctgatgccccccgaaccgatcattatcaatcacgtgatcagtgttgacccaaatgaccag
aagaaaacagcctgctatgacattgacgtggaggtggacgataccctgaaaactcagatg
aattcctttctgctctccacagccagtcaacaggaaattgctgctctggataacaagatc
catgaaacaattgagaccatcaaccagctgaagacacagcgtgaattcatgctgagcttt
gcccgagatcctcagggcttcatcaacgactggctccagtcccagtgccgggatttgaag
acaatgactgatgtcgttgggaatcccgaggaggagcgcagagccgagttctacttccag
ccgtgggcgcaggaagctgtgtgccgatacttctactccaaggtgcagcagagacggcag
gaattggagcaggccctggggatccggaacacatag
DBGET
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