Vidua chalybeata (village indigobird): 128801912
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Entry
128801912 CDS
T11587
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03008
Ribosome biogenesis in eukaryotes
vcha03013
Nucleocytoplasmic transport
vcha03015
mRNA surveillance pathway
vcha05164
Influenza A
vcha05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128801912 (NXF1)
03015 mRNA surveillance pathway
128801912 (NXF1)
03008 Ribosome biogenesis in eukaryotes
128801912 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
128801912 (NXF1)
05168 Herpes simplex virus 1 infection
128801912 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128801912 (NXF1)
03009 Ribosome biogenesis [BR:
vcha03009
]
128801912 (NXF1)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128801912 (NXF1)
mRNA cycle factors
Stress granule specific factors
128801912 (NXF1)
Ribosome biogenesis [BR:
vcha03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
128801912 (NXF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
UBA_8
RRM_NXF1-2
Citrulline_exp
LRR_9
DUF562
Motif
Other DBs
NCBI-GeneID:
128801912
NCBI-ProteinID:
XP_053824044
LinkDB
All DBs
Position
32:159144..174022
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AA seq
609 aa
AA seq
DB search
MAEEGKGGGYSEHDDRVGGRAFPGRRRKGRGPFRGKMYSEVNPRGRPRRARPDEDDGDVA
MAEPHDGPRGRYVPYAPRSGRLANINITVKREPGERGGGAGRDGGRRSWFKITIPYGKKY
DKSWLLSSIQNLCSVPFTPVEFHYDHNRAQFYVEDATTASALKQVSRKITDRDNYKVVIV
INSSAPPQSLQNELKPEEIEQLKLCMSKRYDGSQQALDLKSLRVDPDLVAQSIDVVLSQR
SSMGVVLRIIEENIPELQSLNLASNRLFRLDDLAELPLKAPRLKVLDLSRNELKSERELD
KVKGLKLQELWLDGNPLCDAFRDQASYISSVRERFPKLLRLDGHELPPPIAFDVEAPTTL
PPCKSSYFGSDDLKALVLRFLQQYYSVYDSSDRQGLLDAYHDGACCSLSIPYGPQNTPRN
SLNEYFKDSRNVKKLKDPTMRFKLLKHTRLNVVAFLNELPKTQHDVNSFVVDICAQTNTL
LCFTVHGIFKEVDGKSRDSVRAFTRMFIAVPAGNSGLCIVNDELFVRGASPEELRKAFAL
PAPTPSSSPVPTLSAEQQEMLAAFAMQSGMNLEWSQKCLQDNDWDYGQAGQVFTQLKLEG
KIPEVAFLK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggggaaggggggcgggtacagcgagcacgatgaccgtgtgggcgggcgg
gcgttcccggggcggcggcggaagggccgggggccgttccgggggaagatgtacagcgag
gtgaacccccggggccgcccccgccgcgcccgccccgacgaggacgacggcgacgtcgcc
atggccgagccgcacgacggcccccgcgggcggtacgtgccgtacgcgccgcgctccggc
cgcctggccaacatcaacatcacggtgaaacgggagcccggggagcgcgggggcggcgcc
ggccgcgacggcggcaggaggagctggttcaagatcacgatcccctacgggaagaagtac
gacaagtcctggctgctgagctccatccagaacctctgcagcgtccccttcacccccgtc
gagttccactacgaccacaaccgggcccagttctacgtggaggacgcgaccacggccagc
gccctcaaacaggtgtcgcggaaaatcaccgacagggacaactacaaggtcgtcatcgtc
atcaactcctcggcgccgccgcagtcgctgcagaacgagctcaaacccgaggagatcgag
cagctcaagctgtgcatgagcaagcgctacgacggctcccagcaggcgctggacctcaag
agcctccgcgtggacccggacctggtggcccagagcatcgacgtggtgctgagccagcgc
agctccatgggggtggtgctgcgcatcatcgaggagaacatccccgagctgcagtccctg
aacctggccagtaaccgcctgttccgcctggacgacctggccgagctgcccctcaaggcc
ccgcgcctcaaagtgctcgacctgtcccgcaacgagctgaagtcggagcgggagctggac
aaggtgaaggggctgaagctgcaggagctgtggctggacgggaaccccctgtgcgacgcc
ttccgcgaccaggccagctacatcagctccgtcagagagaggttcccgaaactgctgcgc
ctggacggccacgagctccccccccccatcgccttcgacgtcgaggcgcccacgacgctg
ccgccctgcaagagcagctacttcggctctgacgacctcaaggctttggtgctgcggttc
ctccagcagtattactcggtgtacgactccagtgaccggcaggggctgctggacgcgtac
cacgacggcgcctgctgctcgctgagcatcccctacggcccccagaacacccccaggaac
agcctgaacgagtatttcaaggacagccggaacgtgaagaagctgaaggaccccaccatg
cgcttcaagctgctcaagcacaccaggctgaacgtggtggcgttcctgaacgagctgccc
aagacccagcacgacgtcaactccttcgtggtggacatctgcgctcagacgaacacgctg
ctctgcttcaccgtgcacggcatcttcaaggaagtggacgggaagtcgcgggactcggtg
cgggcgttcacgcggatgttcatcgccgtgccggccgggaacagcgggctgtgcatcgtg
aacgacgagctgtttgtgcgcggtgccagccccgaggagctgcgcaaagccttcgccctg
cccgcgcccacgccctcctccagccccgtgcccacgctctcggccgagcagcaggagatg
ctggcggccttcgccatgcagtcgggcatgaacctcgagtggtcccagaagtgcctccag
gacaacgactgggattacggccaggccgggcaggtcttcacccagctcaagctggaaggg
aagattccggaggtcgcgtttctcaagtga
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