Vidua chalybeata (village indigobird): 128802406
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Entry
128802406 CDS
T11587
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha02010
ABC transporters
vcha04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128802406 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128802406 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcha02000
]
128802406 (ABCA1)
Transporters [BR:
vcha02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128802406 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
128802406
NCBI-ProteinID:
XP_053824708
LinkDB
All DBs
Position
Z:43951898..44047359
Genome browser
AA seq
2283 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEIAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLIDNETFSDFLHHNVSMPSSAVEELLDAGVNL
QQVMVSGYRMRLRDLCNSSTSSEFLTIQNHTAAMDSEAFICTLSKEKLHATEQAFRANLN
PLKPLQRQLSFNSSLWDLSETVETLRESIGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILFTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDFIRTLLKGKALWDLQLPASNWTVEDVARFLSNSPEDFETENG
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVPTEVQLINKSLELLDERRFWAGIVFT
EIIPGSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLISAGLLVLILKMGNLLPYSDPSVVF
IFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGIGVQWDNFFESPLEEDGFSITTSAVMMMFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQQPHLDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSIIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDKQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTA
SVPESVLDIFLKGNWSMENPSPSCQCSSEKIKKMLPVCPSGAGGLPPPQREQDTADILQN
LTGHNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSVYGISAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENHFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSHNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKICKLLLLAKNTIYTRLTLNSSLQM
KAE
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctgtggaagaactttacctacagaagaaga
caaactttccagctgctgatcgaaattgcctggcccctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcagcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccca
tgtttccggtatccaactcccggggaatcccctggtattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggacacg
agtataaaggatgtccaaaaggtcctgggaaaactacgcaagttgggaaattcctctggc
ttagacttgaaacttcgggatttcctgattgacaatgagacattctctgacttcctccat
cataatgtgtccatgccatcatctgccgtagaggagctactggatgcaggggtcaacctc
cagcaggtcatggtgtctggttatcgaatgcgactgcgagatctctgcaacagctcaacg
tcatctgaatttctaacgatccaaaatcacacagcagccatggactctgaagccttcatt
tgcactttgtcaaaggaaaaactccatgcaactgagcaagccttccgtgctaacctgaat
cctttgaagcctcttcagagacaactttctttcaattcctccttgtgggatctgtcagaa
actgtggaaactttgagagagagcattgggaagcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacacagatctatcaggctgtgtcacgtatcgtgtgcggccatcctgaaggcggaggg
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gagctaatgaagaacctggaatccagcccactttccaggattatctggagggctttgaaa
cccttgctgattgggaagatcttgttcactccagatacaccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgaccttgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatttcatt
cggacgttgctgaaaggcaaagccctctgggacctgcagttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacagtccagaggactttgagacagaaaatggc
tctgtgtacacctgggtggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacctggacaaactagagcctgtgcccacagaagtccagctc
attaacaagtccttggaacttctggatgaaaggaggttctgggctggcatagtcttcact
gaaataattcctggcagcacagaccttcctcaacatgtgaaatacaagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccttttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtg
gtagaacaggccatcatcagggttcagacaggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccatgttatgtggatgacatatttctgcgtgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccggctgaaagaaactatgaggattatgggacttgacaatggc
atcctttggttaagctggttcattagcagccttgtccctctcctgataagtgcaggactg
ctggtgctgatcctgaagatggggaatctgctgccttacagtgatcctagtgtggtattc
attttcctctcaatcttcggtgttgtgactatcctccagtgcttcctcatcagcactgtg
ttctccagggccaacctggcagccgcctgtgggggcattgtctacttcacgctctacctg
ccttatgtgctgtgtgttgcctggcaggaccacatcagtttctcactcaagatttttgca
agcctgctgtctccagtagcctttggttttggttgtgagtactttgcactgtttgaggag
cagggaattggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcagccgtcatgatgatgtttgataccttcctgtatggagtcatgacc
tggtacattgaatctgtctttccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcatattggtttggggaggaaccacaggacaggcagcagccccatcttgac
cagaaggggtcttcagaagtctgcaaggaagaagagccggtgcacctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctc
acacttaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccattttgactggcttgttccccccaacttcgggtacagccttcatc
ctgggcaaagatatccgctctgagcttagcatcatcaggcagaacctgggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctatgctcgg
ctcaaagggctgccggaaaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggcttgcctcacaaactgaaagctaggacaagcaagctctctggtggcatgcagaggaag
ctctctgttgccttagcttttgtcggtggctccaaggttgtcattctggacgagcctaca
gctggggtggatccttattctcgcagaggaatatgggaactgcttctgaagtatcggcaa
ggtcgcactatcattctctccacgcaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggatcttctctcttcctgaagaac
cagctgggaacaggctattatttgaccctggtcaaaaaggatgtagattcttctctgagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctcgcag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacactgacgatagatgtg
tctgcaatttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttggcatttccagctatggcatctca
gaaaccaccctggaggagatcttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatggtacattgccagccagaaggaacagacgtgtgtttggagacaaacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgattcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccaaatg
aagggctggaagctcacccagcagcaattcatggctttattgtggaagaggatgctcatt
gccaagagaagccgtaagggcttttttgcccagattgtgctgccagctgtctttgtgtgt
attgctctcatgttcagcctgattgttcctccttttgggaagtatcccagcctggaacta
caaccctggatgtatgatgagcagtacacttttattagcaatgatgctccagaagatgca
ggcactcacaagcttttggatgcccttcttgataagccagggtttgggacacgctgtatg
cagggacattccatcccggacactccttgcactgtggggcagaaggaatggacaactgct
tcagtcccagagtcagtgctggacatcttcctgaaaggcaactggagcatggagaatcct
tccccatcttgccagtgtagcagtgagaagatcaagaagatgctgcctgtatgcccctct
ggtgcaggtggcctgccacccccacagcgtgagcaagacacagctgacatcctccagaat
ctgacaggccacaatatatcagactacctggtgaagacctatgcgcagatcattgggaaa
agcttgaagaacaaaatctgggtgaatgagttcaggtatggtggcttttctttgggagcc
agcagttctctcgtgcttcctccaagtcatgaagtcactgatgccattaaacaggtgaag
aaaattttggagctggcacaggggagttctggggatcgatttctcaacagtttatcaagt
ttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcctgaatgtgatcaacaatgccatccttcgggccaacctccag
cagggtgaaaatcccagtgtttatgggatcagtgccttcaatcacccactaaacctcacc
aagcagcagctctctgaagtagctctgatgaccacctctgtggatgtccttgtgtccatc
tgtgtgatttttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctactgg
ctggccaactttgtgtgggatatgtgcaactacattgttccggccacactagttgtcatc
atcttcatctgcttccaacagaaatcctatgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccggcctcctttgtg
ttcaaaatccctagcacggcctatgttgtgctgaccagtgtgaatctcttcattggtatc
aatgggagtgtggccacctttgtcctggagctcttcaccaacaataagctgaaggacatc
aatgacatcctgaagtctgtcttccttatcttcccccacttctgcctgggccggggactc
attgacatggtgaaaaaccaggctatggctgatgctctggagagatttggagagaatcat
tttgtatcccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagaa
ggtgtggtgttttttctcatcacagtgctcatccagtacagattctttatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataataagtggaggaggacagagtgacattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaagccagcagttgataggatctgtgttggaatcccccctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgcta
actggtgatacagatgtgactggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacatccaagaagtccatcagaacatgggctactgcccacagtttgatgctgttaatgaa
ttgctgacagggcgagagcacttggagttctttgcacttctgagaggtgttccagagaaa
gaagtctgcaaggttggtgagtgggcaattcggaaactgggccttgtgaaatatggagaa
aaatacgctggaaattacagtggagggaacagacgcaagctttccacagccattgctctc
attggagggccacctgtggtgttcctggatgaaccaacaacagggatggatcccaaagca
cgtcgcttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcagtggtgctt
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggttaat
gggcgattcaggtgtctgggcagtgtccagcacctaaaaaacaggtttggagatggttac
accatagtagtgagaattgcaggggcaaacccagacttaaagcctgttgaggagttcttt
gggcatgccttccctggaagtgtcctaaaggaaaaacatcggaatatgctgcagtaccaa
cttccctcttcaccatcctccctggccaaaatattcagtattctctcccataacaagaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaat
tttgctaaggaccaaagtgatgatgaccatactaaggacctgtcattgcacaaaaaccag
actgtggtagacattgcaatccttaactccttcctgcaagatgagaagatatgcaagttg
cttctccttgctaaaaacaccatatacactcggttgactttgaacagcagtttacaaatg
aaagcagaataa
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integrated database retrieval system
