Vidua chalybeata (village indigobird): 128802416
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Entry
128802416 CDS
T11587
Symbol
UTP15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog isoform X1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128802416 (UTP15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcha03009
]
128802416 (UTP15)
Ribosome biogenesis [BR:
vcha03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128802416 (UTP15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_Vps41
PAC11
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_VPS8
DSE1_N
Beta-prop_HPS5
Beta-prop_EIPR1
KNTC1_N
Beta-prop_WDR19_1st
TRM82_WD
Beta-prop_At4g14310
Beta-prop_LRRK2
Beta-prop_NWD2_C
Salt_tol_Pase
Motif
Other DBs
NCBI-GeneID:
128802416
NCBI-ProteinID:
XP_053824730
LinkDB
All DBs
Position
Z:25508915..25519619
Genome browser
AA seq
548 aa
AA seq
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MAAYKPVVVQACPKLGERITQDTLYWRGYKTPVQIKEFGAVNKIDFSPVPPYNYAVTASS
RVSGFFEAFMLLFFSRYLTRRCNALVFWQIHIYGRYSQEPIKTFSRFWHAAYSATYRDDG
RLLAAGSEDGSISLFDVSGKAPLRQFEGHTKPVHLVGFLSDKYRIFSGGDDYSSNLWDIP
SATEIISYSEHTDYVRCGCASKVNTDVFITGSYDHTVKLFDARTKSSVMTIEHGHPVESV
LLFPSGGLLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTVTCLCLNSSGQRLLSGSLDRHV
KIYSTTSYRVVHSFNYATSILSLALSPEDETIVVGMTNGVLNVKHRKPEEKNEDSHKKRQ
PAYRTYVRGRTYMPKQEDFCVSKPVKRVLRKYDKLLRSFQSSKALDAVLEPPIMLHTPEV
TVAVMQELHRRGTLRSALAGRDEKQVNLLLTFVARRVIEPRFTPVLVTVADMLTDIYQPV
VGQSAIVDKQFLKLQQAIGKEIDCQEELLEVLGMMDTLFATFTKKRDTCLEENKSNGVTE
IIETNRNF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtacaagccagtggtggtccaggcgtgccccaagctcggggagaggatcacg
caggacacgctctactggcggggatacaagacacctgttcagataaaggaattcggtgca
gtaaataaaattgacttctccccagtcccgccatataactacgctgtcacagcatcctcg
agggtaagtggcttttttgaggcttttatgctgttgttcttcagccggtatctcaccaga
agatgtaatgccctcgtgttttggcagatccacatctatggccgttactcccaggagccc
atcaagacgttctctcgcttctggcacgcggcgtactctgccacttaccgggacgacggg
cgcctgctcgccgcaggcagcgaggacggcagcatctccctcttcgacgtcagcggcaaa
gcaccgctgaggcagttcgagggtcataccaagccagttcatctagtgggattcctgtcc
gataaataccgaatattttctggtggtgatgattattcatcaaatttgtgggatattcca
agtgccacagaaatcatctcttacagtgaacatactgactatgtgagatgcggctgtgca
agtaaagtgaatacagatgtcttcataacaggttcctatgatcacactgtgaaactgttt
gatgcacgaacaaagagtagtgtcatgacaatagaacacggccatcctgtggagagcgtg
cttctctttccatctggtggacttctggtatctgcaggaggtcgatatgtcaaagtttgg
gatgtattaaaaggtggacagttactagtttcacttaaaaatcaccataaaactgtgact
tgtctgtgcctgaacagctctggacaaagattattgtcaggatcccttgacaggcatgtg
aagatttacagtactacatcctacagagtggtccacagcttcaattatgcaacatccatc
ctcagtcttgcattgtcgcctgaagacgaaaccatagttgtaggcatgaccaatggggtg
ctaaatgttaaacacagaaaaccagaagaaaagaatgaagactctcataagaagagacaa
ccagcatatagaacctatgtgagaggaagaacttacatgccaaaacaggaagatttctgt
gtcagtaagcctgtaaaacgtgttttgagaaaatacgacaagctgctcaggagctttcag
tcttccaaggctcttgatgcagtactggagccacccatcatgcttcatacccctgaagtc
acagttgcagtcatgcaggagctgcatcgcagaggaacactgagaagtgcacttgcaggc
cgagacgagaagcaagttaatctcctgcttacctttgtggcaaggcgtgtgattgagcct
agatttactcctgtgctggtgactgttgctgatatgctcactgacatttatcagcctgtg
gttgggcagtcagcaatagtagataaacagttcttgaaacttcagcaagctatcggaaaa
gaaattgactgtcaagaagaactactagaggttttgggaatgatggatacactgtttgct
acttttactaagaaaagagatacgtgtctagaagagaacaaaagtaatggtgtcacagag
atcattgaaacaaataggaatttctga
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