Vidua chalybeata (village indigobird): 128802533
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Entry
128802533 CDS
T11587
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128802533 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128802533 (TNPO1)
03009 Ribosome biogenesis [BR:
vcha03009
]
128802533 (TNPO1)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128802533 (TNPO1)
Ribosome biogenesis [BR:
vcha03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
128802533 (TNPO1)
Pre-60S particles
128802533 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
TOR1L1_N
Vac14_Fab1_bd
HEAT_EF3_N
Cnd1
TPR_IPO5
IBN_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
HEAT_GCN1_C
INTS7_N
HEAT_GCN1_C_2
Dopey_N
CandA_N
RTP1_C1
ARM_TBCD
PIK3R4-like_middle
TPR_TTI1_C
DUF3689
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
128802533
NCBI-ProteinID:
XP_053824997
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All DBs
Position
Z:25100759..25170301
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AA seq
923 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVLTKLKSE
GPSGWHPFLLLCAVQLCCSTLSCADLLREHSIPDEPTRSLSGLILKNNVKAHFHNFPNGV
TDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPELLPKLCSLLDSEDYNTCEG
AFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQ
ALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMISIVEYMLQRTQD
QDENVALEACEFWLTLAEQPICKEVLCRHLTKLIPVLVNGMKYSEIDIILLKGDVEEDEA
IPDSEQDIRPRFHRSKTVAQQHEEDGIEDDDDDDDELDDDDTISDWNLRKCSAAALDVLA
NVFRDELLPHILPLLKELLFHPEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCL
SDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATL
EEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMP
PLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHN
AQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSS
FALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYI
PMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDN
EEKDSAFRGICTMITVNPSGVVQDFIFFCDAVASWISPKDDLRDMFCKILHGFKNQVGDE
NWRRFSDQFPLPLKERLAAYYGV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgagtggaagcccgacgagcaggggctccaacagatcctgcagctgctcaag
gagtcccagtccccggacaccaccacgcagagagccgtgcaacaaaaactagaacaactc
aatcagtatccagatttcaacaactacctgatctttgttcttacaaagttgaagtctgaa
ggtccctctggatggcatcccttccttctgttgtgtgctgttcaactgtgctgctcaact
ttgtcatgtgcagatctgctaagggagcactcaatcccagatgagccaacacgttccttg
agtggtcttatcttgaagaataatgtaaaagcacattttcacaactttccaaatggggta
actgacttcattaaaagtgaatgtctgaacaacattggtgattcctcccccttaattaga
gctactgtaggcattctgataacaaccattgcctcaaaaggggagttacagaattggcct
gaactcttgccaaagctttgcagcctgttggattctgaagattacaatacctgtgagggt
gcttttggtgctcttcagaagatatgtgaagattctgctgaaattttagatagtgatgtg
ttggaccggccactcaatatcatgatacctaagttcttgcagttcttcaagcacagcagt
ccaaaaatacggtctcatgcagtagcatgtgtcaatcagtttatcatcagcagaactcaa
gctcttatgttgcacatagattcttttattgagaatctttttgcactggctggtgatgag
gagcctgaagtacgcaaaaatgtttgccgtgctcttgtaatgttgctggaagttcgaatg
gatcgcttgcttcctcacatgattagtatagtagagtacatgcttcaaaggacccaggac
caagatgaaaatgtggctttggaggcatgtgaattttggctgactttggctgaacagccg
atttgtaaagaggtattgtgtcggcatcttactaagctgatacctgtgcttgtaaatggt
atgaaatattcagagattgatattattctgttgaagggggatgttgaagaagatgaagct
attccagatagtgagcaggatataaggcctcgtttccatcgttcgaagacggtggctcag
caacatgaagaagatggtattgaagatgatgacgatgatgatgatgaacttgatgatgat
gatactatttctgactggaacttaaggaaatgttctgctgctgctctagatgtcctagct
aatgtatttcgtgatgaacttctaccacacatcttgccactgttgaaggaattgctcttc
caccccgagtgggtagttaaagaatctggtatccttgttcttggtgcaattgctgaaggc
tgcatgcagggtatgattccatatcttccagagctaatccctcaccttattcagtgcctc
tctgacaaaaaggctcttgtgcgctccattacatgctggactcttagtcgctatgcacac
tgggtagttagtcaacccccagacacatacttgaagccattaatgactgagttgctaaag
cgtatcttggacagcaacaagagagtacaagaagctgcctgcagtgcctttgctactcta
gaagaggaggcttgtacagaacttgttccttatcttgcatatatacttgacactttggtc
ttcgcatttagtaaataccagcataaaaacctgctcattctttatgatgctataggaact
ctagcagattctgtaggacatcatctaaataaaccagaatatattcagatgctaatgcct
ccattgatccagaagtggaacatgctgaaggatgaagataaagatctcttccctttatta
gagtgcctgtcatcagttgctactgccttgcaatctggctttcttccatactgtgaacct
gtgtaccagcgctgtgtaaatctggtgcagaagacacttgcacaagccatgttgcataat
gctcagccagaccaatatgaggctccagataaagatttcatgatcgtagctcttgattta
ctcagtggtttagctgaaggacttggaggcaacattgaacagctagtggctcgcagcaat
atcctgacactaatgtatcaatgcatgcaggacaaaatgcctgaggtacggcagagttct
tttgcattgttaggtgacctgacaaaggcatgttttcagcatgttaaaccttgcatcgct
gatttcatgccaattttgggaaccaacctaaacccggaattcatttctgtgtgtaacaat
gccacctgggcaattggagaaatctctatccagatgggtatagaaatgcagccttatatt
ccaatggtcttgcaccagcttgtagaaataattaacagacccaacacaccaaagacgttg
ttagagaacacagcaataacaattggtcgtcttggttacgtttgtcctcaagaggtggcc
cccatgctacagcagtttataagaccctggtgcacctctctgcgaaacataagagacaat
gaggaaaaggattcagcgttccgtgggatatgtaccatgattactgtcaaccccagtgga
gtagtccaagactttatttttttttgtgatgctgttgcatcatggattagcccaaaagat
gatcttcgagacatgttctgtaagattcttcatggatttaaaaatcaagttggggatgag
aattggaggcgtttctctgaccagtttcctcttcccttaaaagagcgccttgcagcttac
tatggagtttaa
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integrated database retrieval system
