Vidua chalybeata (village indigobird): 128802590
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Entry
128802590 CDS
T11587
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcha03400
]
128802590 (SMC5)
DNA repair and recombination proteins [BR:
vcha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
128802590 (SMC5)
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Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_25
FtsK_SpoIIIE
AAA_27
ATG16
Motif
Other DBs
NCBI-GeneID:
128802590
NCBI-ProteinID:
XP_053825121
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Position
Z:58827262..58868827
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AA seq
1058 aa
AA seq
DB search
MAAAREKGKVVKRGESKSPFVLGSIVRIFMKNFLTYTVCEVHPGPNLNLVVGANGTGKSS
IVCAICLGLAGKPSFLGRADKIGLFVKQGCMKGIVEIELFKSPDNILITREIYVMNNASV
WFINRKPATLKTVEEQIAALNIQVDNLCQFLPQDKVGEFTKLSKTELLEATEKSIGSPEM
YQFHCELKNFREKERELENLCREKTTSLEKMKQRVERYKQDVERYHEWKRHVGLIEMLER
KRPWVEYENVREQHEEVKQCRKQVKKELKYLKEMNIPWTKKIQEAEENLKDLDMKTRDNT
AEIRNISQKCKEKQDALEMKDKQIEEINQAFRMKKDEETNRQKKIHQTKKIIEEWQSELG
TMTVCENLQPQIDALNTELKKLREERANTDNDVSDLRAEKTSQEQEEKRIIDRLGQLNNI
MHMKEENLKMRFQDTHSALMWLRNNKDKFKKRICEPMMLEINMKDSRHAKYVENHISSND
MRAFVFESQEDMEMFLVEVRDHQKLRVNAVCAPAESCAENLPSRPIEELHRYGFYSYLRE
LFDAPPPVMSYLCYQYHVHNVPVGTQKTRDMIERVIQETNLRQMYTAEEKYIIKVSSYTK
QNLSSNMCLKEAQYLTSSVDTEERGQLENQRQDISNTLKSLDARLTALFDRQKLLDHKDN
KLRQEKKELLERGNRRRQLESKIGVKYDSLRQLEQDAIDLDKEFQLANVKIKEINKQKAE
LVTELMNLLKRIVPLNVIRVDLALQIARVTAEKNRLQSEYKTGTVQLRAAQQRFHELDNK
KHLLYEKCMELMKQARHVCRLGPDQDFPKEFQVAFQTLPNTLEEIDAFLNEEKTRASCFT
GLSASVVEEYNKQTQEIQQLTEYLEEKKNELNNYKQNISQIKEKWLNLLKVMIEQINGKF
SKFFSSMQCVGEVDLHMENEEEYEKYGIRIRVKFHSSTELHELTPYYQSGGEKTVSTMLY
LMALQELNRCPFRVVDEINQGMDPMNERRVFEMVVETACKKRTSQYFLITPRLLQNLIYN
DKMTVLFVYNGPFMLETYKWNIKRFKRRQRHLSRMTDS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcgggaaaaggggaaggttgtgaagcgtggtgagtccaagtcccccttc
gtattaggctccatcgtcaggatcttcatgaagaactttctaacatacactgtctgtgaa
gtacatccagggcccaacctgaacctggttgtaggtgctaatggcacaggcaagtcaagc
attgtttgtgctatctgcctgggactggctggaaaaccttctttcctagggcgagctgat
aagattggtctgtttgtgaagcaggggtgcatgaaaggcatagtggaaattgaactgttt
aagtcaccagacaatattcttatcacacgtgagatttatgtgatgaacaatgcatcagtg
tggtttatcaacagaaaaccagcaaccctgaaaacagtagaggaacagattgcagcctta
aacatccaggtggataatttatgccagtttcttcctcaggacaaagttggagaatttaca
aaactgagtaagactgagttgcttgaagccactgaaaaatccattggttctccggaaatg
taccagtttcattgtgaactgaaaaatttcagagaaaaggaaagagaactagagaacttg
tgcagagaaaaaaccacctcgttagagaaaatgaaacagagggttgaacggtacaagcaa
gatgttgaaagataccatgaatggaagcgccatgtaggcttaatagagatgcttgagagg
aaaaggccatgggtggaatatgaaaatgttcgtgaacagcatgaagaagtgaaacagtgc
cgaaagcaagttaagaaagaactgaagtatctgaaagaaatgaatatcccatggacaaaa
aaaattcaagaagctgaagaaaacttaaaggatctggatatgaaaacaagagataatact
gctgaaatcagaaatatttcccagaaatgtaaagagaaacaagatgctttggagatgaaa
gataaacagattgaagaaattaatcaagcattcagaatgaaaaaagatgaagaaacaaac
aggcagaagaaaatacaccaaactaaaaaaataatagaggaatggcagagtgagctgggt
acaatgacagtctgtgagaatcttcagccacaaattgatgctcttaatactgagctgaaa
aaactacgagaagagagggcaaatactgataatgatgtcagtgatctaagagcagaaaaa
accagccaagagcaggaagagaaaagaataattgatcgccttggacaacttaataacata
atgcatatgaaggaagagaaccttaaaatgagattccaagacacacactctgctcttatg
tggctaagaaacaacaaagacaagtttaaaaaaaggatttgtgaacccatgatgcttgaa
atcaatatgaaagacagtagacatgcaaaatatgttgaaaatcacatttcgtccaatgac
atgagggctttcgtttttgagagtcaagaagatatggagatgtttctggtggaggtacgt
gatcatcagaaactaagagtgaatgctgtatgtgcacctgctgaatcatgtgctgaaaat
ttaccttcaagacctattgaagaattacaccgatacggattttattcatatttacgggag
ttatttgatgctcctcctcccgtgatgagttacctttgttaccagtaccatgttcataat
gttcctgtgggaacacagaagaccagagacatgattgaaagggtcatacaggaaaccaat
ctgaggcaaatgtatacagcggaagaaaaatacattattaaagtatcttcttacacaaaa
caaaacctttctagtaacatgtgcttgaaggaggcacagtatctcactagttcagtagat
acagaggaaagaggacaactggaaaatcaacgacaggacatcagtaatactttaaagtca
ttggatgcacgtttgactgcactgtttgacagacagaaacttctggatcacaaggacaat
aagctcaggcaggagaagaaggagcttttagagagaggaaaccggaggaggcagttggaa
tcaaaaattggtgtgaagtatgatagtttaagacagctggaacaagatgctattgaccta
gacaaggaatttcagctggcaaatgtaaagatcaaagaaataaataaacaaaaagcagaa
cttgttactgaattgatgaatctcctgaagaggattgtaccattgaacgtcatcagagta
gatttggctcttcagatagccagagtgactgctgagaagaacagactacagtcagagtac
aaaacaggaactgtacagctaagagctgcacagcaacgttttcatgaactggataataag
aagcatcttctttatgagaagtgcatggaattgatgaaacaagctcgacatgtctgtaga
ttgggtccggatcaagattttccaaaggaatttcaagttgcttttcagactcttccaaac
acattggaggaaattgatgcttttctgaatgaagagaaaaccagggcttcctgtttcaca
ggcctcagtgcttcagttgttgaagaatacaataagcaaacacaagaaatacagcagttg
acagaatacctagaggaaaagaaaaatgagttgaataactataagcaaaacatttcacag
atcaaagaaaagtggctaaacctcttgaaagtgatgattgaacaaattaatggaaagttc
agtaagttctttagttctatgcagtgtgttggtgaagttgatcttcatatggaaaatgag
gaggagtatgagaagtatggaattcgcattagagtcaaattccacagtagcactgaactt
catgaattgactccgtattatcagagtggaggtgagaaaactgtttccactatgttatac
ctgatggctctgcaagaactcaacagatgtcctttccgggttgttgatgaaataaatcag
ggaatggatccaatgaatgagagaagagtttttgaaatggttgtggaaactgcttgtaaa
aaaaggacatctcagtacttcctcattacaccaaggctcctgcagaatctcatttataat
gacaagatgactgtgctgtttgtctacaatggaccttttatgctggagacatacaaatgg
aacataaagcgcttcaagagacggcaacggcacctttcaagaatgactgattcttaa
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