Vibrio cholerae O1 IEC224: O3Y_00565
Help
Entry
O3Y_00565 CDS
T01766
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vci
Vibrio cholerae O1 IEC224
Pathway
vci00300
Lysine biosynthesis
vci00470
D-Amino acid metabolism
vci01100
Metabolic pathways
vci01110
Biosynthesis of secondary metabolites
vci01120
Microbial metabolism in diverse environments
vci01230
Biosynthesis of amino acids
Module
vci_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O3Y_00565 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O3Y_00565 (dapF)
Enzymes [BR:
vci01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
O3Y_00565 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AFC57002
LinkDB
All DBs
Position
I:120494..121324
Genome browser
AA seq
276 aa
AA seq
DB search
MHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNM
GVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPL
LESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQV
RVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQISC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccatttttctaaaatgcacggtttgggcaacgactttatggtcgtggactgt
attacccaaaacgtcttcttctctccggaattgatccgccgtctggcggatcgccatacg
ggagtcggctttgatcaattgttggtggttgaagcgccttacgatccagaatcggatttc
cattaccgcattttcaatgccgatggcagcgaagtggagcagtgtggcaatggcgcgcgc
tgttttgcccgttttgtacgcatgaaagggttaaccaacaagtacaccatccatgtcagt
accaagaaaggcaaaatggtactcaatgtggaagaggaagatctgatcaccgtgaacatg
ggtgtgccggagtttgagccgaacaagatcccatttcgcgccaaacagagcgaaaaaacc
tacattctgcgtgtcggtgaacacaccttgttttgcggcgcggtgagtatgggcaacccg
catgtagtgactgtggtggacgatatccgcactgctgcggtagaaaccttagggccgctt
ttggaatcgcacgagcgtttccctgagcgcgtcaacgccggttttatgcaggtcgtgagc
cgtgatgagatcaatttgcgcgtgtatgaacgtggtgcgggcgaaactcaagcttgtggc
agtggcgcgtgcgccgcggttgcggtaggcattttgcaaggtttactggatgagcaagtt
cgtgtccatcttcccggtggtgagctggaaatccactggcaaggccccggcaaaccgctg
tatatgacaggcccggctactcatatctacgatggccaaatctcttgctaa
DBGET
integrated database retrieval system