Vibrio cholerae O1 IEC224: O3Y_03855
Help
Entry
O3Y_03855 CDS
T01766
Name
(GenBank) toxin co-regulated pilus biosynthesis protein B
KO
K10931
toxin coregulated pilus biosynthesis protein B
Organism
vci
Vibrio cholerae O1 IEC224
Pathway
vci05111
Biofilm formation - Vibrio cholerae
Module
vci_M00852
Vibrio cholerae pathogenicity signature, toxin coregulated pilus
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
O3Y_03855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vci02044
]
O3Y_03855
Secretion system [BR:
vci02044
]
Type II secretion system
Toxin co-regulated pilus biosynthesis protein
O3Y_03855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CofB_beta-rpt
N_methyl
DUF1453
PNK3P
Motif
Other DBs
NCBI-ProteinID:
AFC57652
LinkDB
All DBs
Position
I:888224..889516
Genome browser
AA seq
430 aa
AA seq
DB search
MRKYQQGVGLLEAILASAVLGMALVAAGSYYKREAELMIKSSNAFDVIELSSQIQRYASL
SKINNRTNPILKDNKAKEFKDADLKWLKLENCLTAGDVPTTGNNNDLQDQFIACDADYRK
GDLSYFGSQFEFSTYVHPSNPEIQRQIKQVVSYFQYRGMERAFIGDAAGYVISEAKKKGF
SAQDYRIVLIEPDRVGYFESNVISYEEFIENPSARENFLLKATKDRTLALAVSLAQTGEI
AMQRDGSVAFLEDTELCWDTAAGSAKSCLSVRYDTVGNKTELDLKQIDVVSAKGLSFESD
GKTKTPVVSTYETFQDGGRAKTINAIECPTGLNNRFAAVVSSFSTAGQNANFSSESAKDS
QGTTQKDGSKGPHALLSGISLNWTLTNKVWDVTASIGIESGILPTSGIDSGSLLRNPKSL
SFIAFQWCEN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaataccaacaaggtgtcggattattggaggcgattttggcctctgccgtatta
gggatggcattggtcgctgctgggagttattacaagcgggaagctgaactcatgattaaa
tccagtaacgcatttgatgttattgagttgtcatctcaaatccagcgttacgcctcttta
agtaaaattaataatcgtactaacccaatactcaaagataataaggcaaaagaatttaaa
gatgcggatttgaaatggttaaagcttgaaaactgcctcacagcaggtgatgtgccgaca
acgggtaataataatgatctacaagatcagtttattgcttgtgatgctgattataggaaa
ggtgatctaagctattttgggagtcagtttgaattctcaacctatgtacatccttccaac
ccggaaattcaacgacaaataaaacaagtcgtcagctattttcaatatcgaggcatggaa
agagcgtttattggcgatgctgcgggttatgttatcagtgaggccaagaaaaaaggattt
agcgcacaagactatcgaatcgtactaatagaacctgatcgtgtcgggtattttgagtca
aatgttattagctatgaagagtttatagaaaatccatccgctcgtgaaaattttctttta
aaagcgacgaaagatagaactctggcgttggcggtcagtcttgcccaaaccggagaaata
gcaatgcaacgtgatggttccgttgcatttttagaagatactgagttgtgttgggatacg
gcggcaggtagtgcaaagtcttgtctctcggttcggtacgataccgttggaaataaaaca
gaactggatttaaaacagatagatgtggtcagtgcgaaaggcctatcatttgaaagtgat
ggtaaaacaaaaacaccagtggtttctacttatgagacttttcaagatggcggacgggct
aaaaccattaacgctattgaatgcccaacaggtttaaataatcgttttgctgcggtggtg
agttcattttcaactgctggacagaatgcaaactttagttcagagagtgctaaggattct
caaggcacaacccaaaaggatggtagcaaaggaccacatgcgcttctatccggtatatca
ctgaactggacattaacgaataaggtatgggatgtaactgcctcgattggtatcgagtcc
ggtatattgcctacttcaggtatcgattctggatcgttattacgaaaccctaaatcattg
tcttttatagcgtttcaatggtgtgaaaattaa
DBGET
integrated database retrieval system
